RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 FTSJ3Q8IY81 847 aaKnown RBP8.88□□□□□ -0.99
CLCN3-206ENST00000507875 STAG1Q8WVM7 1258 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 FOXJ1Q92949 421 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 CYLDQ9NQC7 956 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 IFT57Q9NWB7 429 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 RCAN3Q9UKA8 241 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 SOS1Q07889 1333 aaPredicted RBP8.88□□□□□ -0.99
CLCN3-206ENST00000507875 WDR17Q8IZU2 1322 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 A0A0G2JS52 829 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 F6X3S4 739 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 APLP1P51693 650 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 GLIPR1L2Q4G1C9 344 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 HSP90AB4PQ58FF6 505 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 SH3RF1Q7Z6J0 888 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 EVI5LQ96CN4 794 aa8.88□□□□□ -0.99
CLCN3-206ENST00000507875 G3BP2Q9UN86 482 aaKnown RBP8.88□□□□□ -0.99
CLCN3-206ENST00000507875 KDM3BQ7LBC6 1761 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 CBLBQ13191 982 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 ENOX2Q16206 610 aaKnown RBP8.87□□□□□ -0.99
CLCN3-206ENST00000507875 C16orf46Q6P387 395 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 PHACTR3Q96KR7 559 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 UNC93B1Q9H1C4 597 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 MAP3K5Q99683 1374 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 RRP1P56182 461 aaKnown RBP8.87□□□□□ -0.99
CLCN3-206ENST00000507875 LINC01559Q495D7 138 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 NBPF14Q5TI25 921 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 NBPF6Q5VWK0 638 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 ZFRQ96KR1 1074 aaKnown RBP8.87□□□□□ -0.99
CLCN3-206ENST00000507875 NBPF4Q96M43 638 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 COPRSQ9NQ92 184 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 SERTAD1Q9UHV2 236 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 POLIQ9UNA4 740 aa8.87□□□□□ -0.99
CLCN3-206ENST00000507875 GNL2Q13823 731 aaKnown RBP8.86□□□□□ -0.99
CLCN3-206ENST00000507875 SEPT12Q8IYM1 358 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.86□□□□□ -0.99
CLCN3-206ENST00000507875 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.86□□□□□ -0.99
CLCN3-206ENST00000507875 GABBR1Q9UBS5 961 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 CRB1P82279 1406 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 GNAT3A8MTJ3 354 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 OPLAHO14841 1288 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 ZNF853P0CG23 659 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 GNA15P30679 374 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 SCNN1DP51172 638 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 EVA1CP58658 441 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 RTF1Q92541 710 aaKnown RBP8.86□□□□□ -0.99
CLCN3-206ENST00000507875 CARD10Q9BWT7 1032 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 COL4A3BPQ9Y5P4 624 aa8.86□□□□□ -0.99
CLCN3-206ENST00000507875 SHANK3Q9BYB0 1731 aa8.85□□□□□ -0.99
CLCN3-206ENST00000507875 TATP17735 454 aaPredicted RBP8.85□□□□□ -0.99
CLCN3-206ENST00000507875 AKAP4Q5JQC9 854 aa8.85□□□□□ -0.99
CLCN3-206ENST00000507875 FILIP1Q7Z7B0 1213 aa8.85□□□□□ -0.99
CLCN3-206ENST00000507875 NEUROD4Q9HD90 331 aa8.85□□□□□ -0.99
CLCN3-206ENST00000507875 SPG7Q9UQ90 795 aa8.85□□□□□ -0.99
CLCN3-206ENST00000507875 USP4Q13107 963 aa8.85□□□□□ -0.99
CLCN3-206ENST00000507875 MTHFSDQ2M296 383 aaKnown RBP8.85□□□□□ -0.99
CLCN3-206ENST00000507875 RAPGEF4Q8WZA2 1011 aa8.85□□□□□ -0.99
CLCN3-206ENST00000507875 RRP7AQ9Y3A4 280 aaKnown RBP8.85□□□□□ -0.99
CLCN3-206ENST00000507875 GLI3P10071 1580 aa8.84□□□□□ -0.99
CLCN3-206ENST00000507875 RIMBP2O15034 1052 aa8.84□□□□□ -0.99
CLCN3-206ENST00000507875 HSP90AB1P08238 724 aaKnown RBP8.84□□□□□ -0.99
CLCN3-206ENST00000507875 ATF4P18848 351 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-206ENST00000507875 EPHA4P54764 986 aa8.84□□□□□ -0.99
CLCN3-206ENST00000507875 FAM193AP78312 1265 aa8.84□□□□□ -0.99
CLCN3-206ENST00000507875 SH3PXD2AQ5TCZ1 1133 aa8.84□□□□□ -0.99
CLCN3-206ENST00000507875 KRT27Q7Z3Y8 459 aa8.84□□□□□ -0.99
CLCN3-206ENST00000507875 ARMC5Q96C12 935 aa8.84□□□□□ -0.99
CLCN3-206ENST00000507875 LTV1Q96GA3 475 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-206ENST00000507875 CRELD1Q96HD1 420 aa8.84□□□□□ -0.99
CLCN3-206ENST00000507875 GGT7Q9UJ14 662 aa8.84□□□□□ -0.99
CLCN3-206ENST00000507875 CEMIPQ8WUJ3 1361 aa8.84□□□□□ -0.99
CLCN3-206ENST00000507875 K7ELQ4 463 aaPredicted RBP8.83□□□□□ -1
CLCN3-206ENST00000507875 STK10O94804 968 aaKnown RBP8.83□□□□□ -1
CLCN3-206ENST00000507875 IGFBP4P22692 258 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 DNM1Q05193 864 aaKnown RBP8.83□□□□□ -1
CLCN3-206ENST00000507875 PAK2Q13177 524 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 CHRNA2Q15822 529 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 DMRTB1Q96MA1 342 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 ZSWIM6Q9HCJ5 1215 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 STRN4Q9NRL3 753 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 STIM2Q9P246 746 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 NOP58Q9Y2X3 529 aaKnown RBP8.83□□□□□ -1
CLCN3-206ENST00000507875 MRVI1Q9Y6F6 885 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 USP3Q9Y6I4 520 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 V9GY48 417 aaPredicted RBP8.83□□□□□ -1
CLCN3-206ENST00000507875 MRC1P22897 1456 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 ZBTB24O43167 697 aaPredicted RBP8.83□□□□□ -1
CLCN3-206ENST00000507875 DXOO77932 396 aaKnown RBP8.83□□□□□ -1
CLCN3-206ENST00000507875 IRS1P35568 1242 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 PCDH12Q9NPG4 1184 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 THRAP3Q9Y2W1 955 aaKnown RBP8.83□□□□□ -1
CLCN3-206ENST00000507875 SPATA31A5Q5VU36 1347 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 SPATA31A7Q8IWB4 1347 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 FANCIQ9NVI1 1328 aa8.83□□□□□ -1
CLCN3-206ENST00000507875 PSDA5PKW4 1024 aaPredicted RBP8.82□□□□□ -1
CLCN3-206ENST00000507875 CCDC85CA6NKD9 419 aa8.82□□□□□ -1
CLCN3-206ENST00000507875 SLC4A3P48751 1232 aa8.82□□□□□ -1
CLCN3-206ENST00000507875 ATP2B2Q01814 1243 aa8.82□□□□□ -1
CLCN3-206ENST00000507875 ALDH1L2Q3SY69 923 aa8.82□□□□□ -1
CLCN3-206ENST00000507875 C1orf141Q5JVX7 400 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms