RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 USP17L3A6NCW0 530 aa20.98■□□□□ 0.95
RNF4-209ENST00000507784 USP17L4A6NCW7 530 aa20.98■□□□□ 0.95
RNF4-209ENST00000507784 GRIK5Q16478 980 aa20.98■□□□□ 0.95
RNF4-209ENST00000507784 USP17L1Q7RTZ2 530 aa20.98■□□□□ 0.95
RNF4-209ENST00000507784 ZNF589Q86UQ0 364 aaPredicted RBP20.98■□□□□ 0.95
RNF4-209ENST00000507784 JDP2Q8WYK2 163 aa20.98■□□□□ 0.95
RNF4-209ENST00000507784 NSUN4Q96CB9 384 aaKnown RBP20.98■□□□□ 0.95
RNF4-209ENST00000507784 USP26Q9BXU7 913 aa20.98■□□□□ 0.95
RNF4-209ENST00000507784 C22orf23Q9BZE7 217 aa20.98■□□□□ 0.95
RNF4-209ENST00000507784 CCDC171Q6TFL3 1326 aa20.98■□□□□ 0.95
RNF4-209ENST00000507784 MAST2Q6P0Q8 1798 aa20.97■□□□□ 0.95
RNF4-209ENST00000507784 YDJCA8MPS7 323 aa20.97■□□□□ 0.95
RNF4-209ENST00000507784 F8W031 263 aaPredicted RBP20.97■□□□□ 0.95
RNF4-209ENST00000507784 GSTO1P78417 241 aa20.97■□□□□ 0.95
RNF4-209ENST00000507784 STRIP1Q5VSL9 837 aa20.97■□□□□ 0.95
RNF4-209ENST00000507784 SCN9AQ15858 1988 aa20.97■□□□□ 0.95
RNF4-209ENST00000507784 LTBP3Q9NS15 1303 aa20.97■□□□□ 0.95
RNF4-209ENST00000507784 RAD17O75943 681 aa20.96■□□□□ 0.95
RNF4-209ENST00000507784 LDHCP07864 332 aa20.96■□□□□ 0.95
RNF4-209ENST00000507784 PTH1RQ03431 593 aa20.96■□□□□ 0.95
RNF4-209ENST00000507784 MIGA1Q8NAN2 632 aa20.96■□□□□ 0.95
RNF4-209ENST00000507784 AIDAQ96BJ3 306 aa20.96■□□□□ 0.95
RNF4-209ENST00000507784 LSG1Q9H089 658 aaKnown RBP20.96■□□□□ 0.95
RNF4-209ENST00000507784 ZNRF3Q9ULT6 936 aa20.96■□□□□ 0.95
RNF4-209ENST00000507784 MAGEB6P1A0A0J9YX57 407 aa20.95■□□□□ 0.94
RNF4-209ENST00000507784 GPAA1O43292 621 aa20.95■□□□□ 0.94
RNF4-209ENST00000507784 MYH2Q9UKX2 1941 aa20.95■□□□□ 0.94
RNF4-209ENST00000507784 COL4A5P29400 1685 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 IGSF3O75054 1194 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 MBD4O95243 580 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 YBX3P16989 372 aaKnown RBP eCLIP20.94■□□□□ 0.94
RNF4-209ENST00000507784 MCCP23508 829 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 FKBP1AP62942 108 aaKnown RBP20.94■□□□□ 0.94
RNF4-209ENST00000507784 GPR162Q16538 588 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 DACT2Q5SW24 774 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 ADGRA1Q86SQ6 560 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 SLF2Q8IX21 1173 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 CERS5Q8N5B7 392 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 ZNF384Q8TF68 577 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 NOL10Q9BSC4 688 aaKnown RBP20.94■□□□□ 0.94
RNF4-209ENST00000507784 ARMT1Q9H993 441 aa20.94■□□□□ 0.94
RNF4-209ENST00000507784 TTF2Q9UNY4 1162 aaKnown RBP20.94■□□□□ 0.94
RNF4-209ENST00000507784 PSME4Q14997 1843 aa20.93■□□□□ 0.94
RNF4-209ENST00000507784 DIXDC1Q155Q3 683 aa20.93■□□□□ 0.94
RNF4-209ENST00000507784 TMED8Q6PL24 325 aaPredicted RBP20.93■□□□□ 0.94
RNF4-209ENST00000507784 SUGT1Q9Y2Z0 365 aa20.93■□□□□ 0.94
RNF4-209ENST00000507784 PSMD14O00487 310 aa20.92■□□□□ 0.94
RNF4-209ENST00000507784 DYNLL1P63167 89 aaKnown RBP20.92■□□□□ 0.94
RNF4-209ENST00000507784 LCORLQ8N3X6 602 aa20.92■□□□□ 0.94
RNF4-209ENST00000507784 TBC1D32Q96NH3 1257 aa20.92■□□□□ 0.94
RNF4-209ENST00000507784 APPP05067 770 aa20.91■□□□□ 0.94
RNF4-209ENST00000507784 SCNN1DP51172 638 aa20.91■□□□□ 0.94
RNF4-209ENST00000507784 PRELPP51888 382 aa20.91■□□□□ 0.94
RNF4-209ENST00000507784 VPS53Q5VIR6 699 aa20.91■□□□□ 0.94
RNF4-209ENST00000507784 CIAPIN1Q6FI81 312 aa20.91■□□□□ 0.94
RNF4-209ENST00000507784 KIAA0825Q8IV33 1275 aa20.91■□□□□ 0.94
RNF4-209ENST00000507784 STRBPQ96SI9 672 aaKnown RBP20.91■□□□□ 0.94
RNF4-209ENST00000507784 AATFQ9NY61 560 aaKnown RBP eCLIP20.91■□□□□ 0.94
RNF4-209ENST00000507784 RBM19Q9Y4C8 960 aaKnown RBP20.91■□□□□ 0.94
RNF4-209ENST00000507784 RBM8AQ9Y5S9 174 aaKnown RBP20.91■□□□□ 0.94
RNF4-209ENST00000507784 ZNF646O15015 1829 aaPredicted RBP20.9■□□□□ 0.94
RNF4-209ENST00000507784 MROH7-TTC4A0A0A0MT08 1334 aa20.9■□□□□ 0.94
RNF4-209ENST00000507784 EPB41L2O43491 1005 aaKnown RBP20.9■□□□□ 0.94
RNF4-209ENST00000507784 BAG3O95817 575 aa20.9■□□□□ 0.94
RNF4-209ENST00000507784 HSPD1P10809 573 aaKnown RBP20.9■□□□□ 0.94
RNF4-209ENST00000507784 LMNB1P20700 586 aa20.9■□□□□ 0.94
RNF4-209ENST00000507784 EIF6P56537 245 aaKnown RBP20.9■□□□□ 0.94
RNF4-209ENST00000507784 CXCL9Q07325 125 aa20.9■□□□□ 0.94
RNF4-209ENST00000507784 RSBN1LQ6PCB5 846 aaPredicted RBP20.9■□□□□ 0.94
RNF4-209ENST00000507784 MAP4K1Q92918 833 aa20.9■□□□□ 0.94
RNF4-209ENST00000507784 SLC4A4Q9Y6R1 1079 aa20.9■□□□□ 0.94
RNF4-209ENST00000507784 U3KPZ7 1027 aaPredicted RBP20.9■□□□□ 0.94
RNF4-209ENST00000507784 VIL1P09327 827 aaKnown RBP20.89■□□□□ 0.93
RNF4-209ENST00000507784 TNIP1Q15025 636 aa20.89■□□□□ 0.93
RNF4-209ENST00000507784 DSCC1Q9BVC3 393 aa20.89■□□□□ 0.93
RNF4-209ENST00000507784 SBF1O95248 1867 aa20.88■□□□□ 0.93
RNF4-209ENST00000507784 MYO3BQ8WXR4 1341 aa20.88■□□□□ 0.93
RNF4-209ENST00000507784 PATL2C9JE40 543 aaKnown RBP20.88■□□□□ 0.93
RNF4-209ENST00000507784 PRKAB2O43741 272 aa20.88■□□□□ 0.93
RNF4-209ENST00000507784 GNAT2P19087 354 aa20.88■□□□□ 0.93
RNF4-209ENST00000507784 BTDP43251 543 aa20.88■□□□□ 0.93
RNF4-209ENST00000507784 RBM25P49756 843 aaKnown RBP20.88■□□□□ 0.93
RNF4-209ENST00000507784 RBM5P52756 815 aaKnown RBP eCLIP20.88■□□□□ 0.93
RNF4-209ENST00000507784 DICER1Q9UPY3 1922 aaKnown RBP20.88■□□□□ 0.93
RNF4-209ENST00000507784 HSPA4P34932 840 aa20.87■□□□□ 0.93
RNF4-209ENST00000507784 TEKT1Q969V4 418 aa20.87■□□□□ 0.93
RNF4-209ENST00000507784 RIOK1Q9BRS2 568 aaKnown RBP20.87■□□□□ 0.93
RNF4-209ENST00000507784 ZBTB12Q9Y330 459 aaPredicted RBP20.87■□□□□ 0.93
RNF4-209ENST00000507784 GJA3Q9Y6H8 435 aa20.87■□□□□ 0.93
RNF4-209ENST00000507784 CRKP46108 304 aa20.86■□□□□ 0.93
RNF4-209ENST00000507784 FAM163AQ96GL9 167 aaPredicted RBP20.86■□□□□ 0.93
RNF4-209ENST00000507784 CRNKL1Q9BZJ0 848 aaKnown RBP20.86■□□□□ 0.93
RNF4-209ENST00000507784 RNF181Q9P0P0 153 aa20.86■□□□□ 0.93
RNF4-209ENST00000507784 CTNNA3Q9UI47 895 aa20.86■□□□□ 0.93
RNF4-209ENST00000507784 HDAC9Q9UKV0 1011 aa20.86■□□□□ 0.93
RNF4-209ENST00000507784 DAGLAQ9Y4D2 1042 aa20.86■□□□□ 0.93
RNF4-209ENST00000507784 GPR75-ASB3A0A0A6YYF3 556 aa20.85■□□□□ 0.93
RNF4-209ENST00000507784 NECTIN1Q15223 517 aa20.85■□□□□ 0.93
RNF4-209ENST00000507784 RNF20Q5VTR2 975 aa20.85■□□□□ 0.93
RNF4-209ENST00000507784 CREB3L3Q68CJ9 461 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms