RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 COL1A1P02452 1464 aaPredicted RBP17.46■□□□□ 0.39
CCHCR1-222ENST00000507459 NF2P35240 595 aa17.46■□□□□ 0.39
CCHCR1-222ENST00000507459 MOB2Q70IA6 237 aa17.46■□□□□ 0.39
CCHCR1-222ENST00000507459 TEKT1Q969V4 418 aa17.46■□□□□ 0.39
CCHCR1-222ENST00000507459 HHIPL1Q96JK4 782 aa17.46■□□□□ 0.39
CCHCR1-222ENST00000507459 DEFB129Q9H1M3 183 aa17.46■□□□□ 0.39
CCHCR1-222ENST00000507459 MYH13Q9UKX3 1938 aa17.46■□□□□ 0.39
CCHCR1-222ENST00000507459 ARAP2Q8WZ64 1704 aa17.45■□□□□ 0.38
CCHCR1-222ENST00000507459 SEMA3EO15041 775 aa17.45■□□□□ 0.38
CCHCR1-222ENST00000507459 PRKG1Q13976 671 aa17.45■□□□□ 0.38
CCHCR1-222ENST00000507459 RGMBQ6NW40 437 aa17.45■□□□□ 0.38
CCHCR1-222ENST00000507459 ZNF70Q9UC06 446 aaPredicted RBP17.45■□□□□ 0.38
CCHCR1-222ENST00000507459 SUGT1Q9Y2Z0 365 aa17.45■□□□□ 0.38
CCHCR1-222ENST00000507459 MAST3O60307 1309 aa17.45■□□□□ 0.38
CCHCR1-222ENST00000507459 PRDX5P30044 214 aa17.44■□□□□ 0.38
CCHCR1-222ENST00000507459 ZNF157P51786 506 aaPredicted RBP17.44■□□□□ 0.38
CCHCR1-222ENST00000507459 HDLBPQ00341 1268 aaKnown RBP17.44■□□□□ 0.38
CCHCR1-222ENST00000507459 RASGRF1Q13972 1273 aa17.44■□□□□ 0.38
CCHCR1-222ENST00000507459 SPDYE2Q495Y8 402 aa17.44■□□□□ 0.38
CCHCR1-222ENST00000507459 ZBTB40Q9NUA8 1239 aa17.44■□□□□ 0.38
CCHCR1-222ENST00000507459 TCP10L2B9ZVM9 353 aa17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 UBE2Q2LH0YL09 131 aa17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 LDHBP07195 334 aaKnown RBP17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 FKBP1BP68106 108 aa17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 PDE3AQ14432 1141 aa17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 RASA3Q14644 834 aa17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 AIDAQ96BJ3 306 aa17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 EXOC6BQ9Y2D4 811 aa17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
CCHCR1-222ENST00000507459 ECM29Q5VYK3 1845 aa17.42■□□□□ 0.38
CCHCR1-222ENST00000507459 MAP2K1Q02750 393 aaPredicted RBP17.42■□□□□ 0.38
CCHCR1-222ENST00000507459 TNFAIP1Q13829 316 aa17.42■□□□□ 0.38
CCHCR1-222ENST00000507459 DIXDC1Q155Q3 683 aa17.42■□□□□ 0.38
CCHCR1-222ENST00000507459 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
CCHCR1-222ENST00000507459 MRIQ9BWK5 157 aa17.42■□□□□ 0.38
CCHCR1-222ENST00000507459 WBP1LQ9NX94 342 aa17.42■□□□□ 0.38
CCHCR1-222ENST00000507459 ABCF2Q9UG63 623 aa17.42■□□□□ 0.38
CCHCR1-222ENST00000507459 FZD1Q9UP38 647 aa17.42■□□□□ 0.38
CCHCR1-222ENST00000507459 FOXN1O15353 648 aa17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 MAP2K2P36507 400 aa17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 CACNB3P54284 484 aa17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 NBPF12Q5TAG4 269 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 APOBEC3HQ6NTF7 200 aaKnown RBP17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 RPAP2Q8IXW5 612 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 ZGPATQ8N5A5 531 aaKnown RBP17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 CCDC102AQ96A19 550 aa17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 ZDHHC15Q96MV8 337 aa17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 ZIC5Q96T25 663 aa17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 DBNDD2Q9BQY9 259 aa17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 GPR108Q9NPR9 543 aa17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 PPP2R3BQ9Y5P8 575 aa17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 SALL1Q9NSC2 1324 aa17.41■□□□□ 0.38
CCHCR1-222ENST00000507459 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
CCHCR1-222ENST00000507459 NOGQ13253 232 aa17.4■□□□□ 0.38
CCHCR1-222ENST00000507459 SUPT20HL1Q3ZLR7 823 aa17.4■□□□□ 0.38
CCHCR1-222ENST00000507459 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
CCHCR1-222ENST00000507459 ARMC9Q7Z3E5 817 aa17.4■□□□□ 0.38
CCHCR1-222ENST00000507459 BEGAINQ9BUH8 593 aa17.4■□□□□ 0.38
CCHCR1-222ENST00000507459 CCDC8Q9H0W5 538 aaPredicted RBP17.4■□□□□ 0.38
CCHCR1-222ENST00000507459 TMOD2Q9NZR1 351 aa17.4■□□□□ 0.38
CCHCR1-222ENST00000507459 HMG20BQ9P0W2 317 aa17.4■□□□□ 0.38
CCHCR1-222ENST00000507459 ANGEL1Q9UNK9 670 aaKnown RBP17.4■□□□□ 0.38
CCHCR1-222ENST00000507459 FAM155AB1AL88 458 aaPredicted RBP17.39■□□□□ 0.37
CCHCR1-222ENST00000507459 APBB1O00213 710 aa17.39■□□□□ 0.37
CCHCR1-222ENST00000507459 HMMRO75330 724 aa17.39■□□□□ 0.37
CCHCR1-222ENST00000507459 TNNI2P48788 182 aa17.39■□□□□ 0.37
CCHCR1-222ENST00000507459 CCDC158Q5M9N0 1113 aa17.39■□□□□ 0.37
CCHCR1-222ENST00000507459 TTC39AQ5SRH9 613 aa17.39■□□□□ 0.37
CCHCR1-222ENST00000507459 DZIP1Q86YF9 867 aaKnown RBP17.39■□□□□ 0.37
CCHCR1-222ENST00000507459 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
CCHCR1-222ENST00000507459 BCL11AQ9H165 835 aa17.39■□□□□ 0.37
CCHCR1-222ENST00000507459 DAGLAQ9Y4D2 1042 aa17.39■□□□□ 0.37
CCHCR1-222ENST00000507459 ZBTB22O15209 634 aa17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 PPP1R12BO60237 982 aaPredicted RBP17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 SLC10A3P09131 477 aa17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 UQCRFS1P1P0C7P4 283 aa17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 SPTY2D1Q68D10 685 aaPredicted RBP17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 TBC1D9Q6ZT07 1266 aa17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 ERC1Q8IUD2 1116 aa17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 EAF2Q96CJ1 260 aaPredicted RBP17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 TMEM39BQ9GZU3 492 aa17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 SNRKQ9NRH2 765 aa17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 PDS5AQ29RF7 1337 aaKnown RBP17.38■□□□□ 0.37
CCHCR1-222ENST00000507459 MCAMP43121 646 aa17.37■□□□□ 0.37
CCHCR1-222ENST00000507459 KIF23Q02241 960 aaPredicted RBP17.37■□□□□ 0.37
CCHCR1-222ENST00000507459 HSP90AB4PQ58FF6 505 aa17.37■□□□□ 0.37
CCHCR1-222ENST00000507459 ERICH6Q7L0X2 663 aa17.37■□□□□ 0.37
CCHCR1-222ENST00000507459 RASAL3Q86YV0 1011 aa17.37■□□□□ 0.37
CCHCR1-222ENST00000507459 CDAN1Q8IWY9 1227 aa17.37■□□□□ 0.37
CCHCR1-222ENST00000507459 IL1RAPL2Q9NP60 686 aa17.37■□□□□ 0.37
CCHCR1-222ENST00000507459 TLR7Q9NYK1 1049 aaKnown RBP17.37■□□□□ 0.37
CCHCR1-222ENST00000507459 DBNLQ9UJU6 430 aaKnown RBP17.37■□□□□ 0.37
CCHCR1-222ENST00000507459 CTCFP49711 727 aaPredicted RBP17.36■□□□□ 0.37
CCHCR1-222ENST00000507459 MKRN3Q13064 507 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms