RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 AFDNP55196 1824 aaKnown RBP12.19□□□□□ -0.46
CLCN3-205ENST00000506924 GPTP24298 496 aa12.19□□□□□ -0.46
CLCN3-205ENST00000506924 TWISTNBQ3B726 338 aaPredicted RBP12.19□□□□□ -0.46
CLCN3-205ENST00000506924 SETDB2Q96T68 719 aa12.19□□□□□ -0.46
CLCN3-205ENST00000506924 PHAXQ9H814 394 aaKnown RBP12.19□□□□□ -0.46
CLCN3-205ENST00000506924 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLCN3-205ENST00000506924 CD2APQ9Y5K6 639 aa12.19□□□□□ -0.46
CLCN3-205ENST00000506924 A0A0G2JLW4 131 aa12.18□□□□□ -0.46
CLCN3-205ENST00000506924 NPHP1O15259 732 aa12.18□□□□□ -0.46
CLCN3-205ENST00000506924 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
CLCN3-205ENST00000506924 PPP1R12CQ9BZL4 782 aa12.18□□□□□ -0.46
CLCN3-205ENST00000506924 MYH16Q9H6N6 1097 aa12.18□□□□□ -0.46
CLCN3-205ENST00000506924 DBF4Q9UBU7 674 aaPredicted RBP12.18□□□□□ -0.46
CLCN3-205ENST00000506924 ZNF652Q9Y2D9 606 aa12.18□□□□□ -0.46
CLCN3-205ENST00000506924 N4BP2Q86UW6 1770 aaPredicted RBP12.18□□□□□ -0.46
CLCN3-205ENST00000506924 NUP98P52948 1817 aa12.17□□□□□ -0.46
CLCN3-205ENST00000506924 ATP9BO43861 1147 aa12.17□□□□□ -0.46
CLCN3-205ENST00000506924 HNRNPUQ00839 825 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLCN3-205ENST00000506924 GPR162Q16538 588 aa12.17□□□□□ -0.46
CLCN3-205ENST00000506924 CCDC30Q5VVM6 783 aa12.17□□□□□ -0.46
CLCN3-205ENST00000506924 CLEC4GQ6UXB4 293 aa12.17□□□□□ -0.46
CLCN3-205ENST00000506924 PLEKHM2Q8IWE5 1019 aa12.17□□□□□ -0.46
CLCN3-205ENST00000506924 C10orf71Q711Q0 1435 aa12.17□□□□□ -0.46
CLCN3-205ENST00000506924 CARMIL3Q8ND23 1372 aa12.17□□□□□ -0.46
CLCN3-205ENST00000506924 ERVV-1B6SEH8 477 aa12.16□□□□□ -0.46
CLCN3-205ENST00000506924 NRG2O14511 850 aaPredicted RBP12.16□□□□□ -0.46
CLCN3-205ENST00000506924 VAMP4O75379 141 aa12.16□□□□□ -0.46
CLCN3-205ENST00000506924 DPEP1P16444 411 aa12.16□□□□□ -0.46
CLCN3-205ENST00000506924 SMPD1P17405 629 aa12.16□□□□□ -0.46
CLCN3-205ENST00000506924 CHRNA5P30532 468 aa12.16□□□□□ -0.46
CLCN3-205ENST00000506924 PRR5LQ6MZQ0 368 aa12.16□□□□□ -0.46
CLCN3-205ENST00000506924 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
CLCN3-205ENST00000506924 HYPKQ9NX55 129 aa12.16□□□□□ -0.46
CLCN3-205ENST00000506924 J3QL48 77 aa12.15□□□□□ -0.46
CLCN3-205ENST00000506924 SLFN5Q08AF3 891 aa12.15□□□□□ -0.46
CLCN3-205ENST00000506924 NNTQ13423 1086 aa12.15□□□□□ -0.46
CLCN3-205ENST00000506924 G2E3Q7L622 706 aa12.15□□□□□ -0.46
CLCN3-205ENST00000506924 CCDC82Q8N4S0 544 aa12.15□□□□□ -0.46
CLCN3-205ENST00000506924 CNBD1Q8NA66 436 aa12.15□□□□□ -0.46
CLCN3-205ENST00000506924 PLPP7Q8NBV4 271 aa12.15□□□□□ -0.46
CLCN3-205ENST00000506924 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
CLCN3-205ENST00000506924 NRXN2Q9P2S2 1712 aa12.14□□□□□ -0.47
CLCN3-205ENST00000506924 UBN2Q6ZU65 1347 aa12.14□□□□□ -0.47
CLCN3-205ENST00000506924 KIF13BQ9NQT8 1826 aa12.14□□□□□ -0.47
CLCN3-205ENST00000506924 PALM3A6NDB9 673 aaPredicted RBP12.14□□□□□ -0.47
CLCN3-205ENST00000506924 E9PSI1 815 aa12.14□□□□□ -0.47
CLCN3-205ENST00000506924 YBX3P16989 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
CLCN3-205ENST00000506924 SUSD4Q5VX71 490 aa12.14□□□□□ -0.47
CLCN3-205ENST00000506924 TRAF7Q6Q0C0 670 aa12.14□□□□□ -0.47
CLCN3-205ENST00000506924 STK31Q9BXU1 1019 aa12.14□□□□□ -0.47
CLCN3-205ENST00000506924 PGPEP1Q9NXJ5 209 aa12.14□□□□□ -0.47
CLCN3-205ENST00000506924 ATP5J2-PTCD1G3V325 749 aa12.13□□□□□ -0.47
CLCN3-205ENST00000506924 SKIP12755 728 aa12.13□□□□□ -0.47
CLCN3-205ENST00000506924 GTF2E1P29083 439 aaPredicted RBP12.13□□□□□ -0.47
CLCN3-205ENST00000506924 TGFB2P61812 414 aa12.13□□□□□ -0.47
CLCN3-205ENST00000506924 ZNF34Q8IZ26 560 aa12.13□□□□□ -0.47
CLCN3-205ENST00000506924 PLBD2Q8NHP8 589 aa12.13□□□□□ -0.47
CLCN3-205ENST00000506924 CCDC85AQ96PX6 553 aaPredicted RBP12.13□□□□□ -0.47
CLCN3-205ENST00000506924 DOLKQ9UPQ8 538 aa12.13□□□□□ -0.47
CLCN3-205ENST00000506924 KIAA1551Q9HCM1 1747 aa12.13□□□□□ -0.47
CLCN3-205ENST00000506924 ERVH48-1M5A8F1 160 aa12.12□□□□□ -0.47
CLCN3-205ENST00000506924 PIK3CDO00329 1044 aa12.12□□□□□ -0.47
CLCN3-205ENST00000506924 NR3C2P08235 984 aa12.12□□□□□ -0.47
CLCN3-205ENST00000506924 KCNA3P22001 575 aa12.12□□□□□ -0.47
CLCN3-205ENST00000506924 ST5P78524 1137 aa12.12□□□□□ -0.47
CLCN3-205ENST00000506924 TPTE2Q6XPS3 522 aa12.12□□□□□ -0.47
CLCN3-205ENST00000506924 TBC1D9Q6ZT07 1266 aa12.12□□□□□ -0.47
CLCN3-205ENST00000506924 C2CD5Q86YS7 1000 aa12.12□□□□□ -0.47
CLCN3-205ENST00000506924 MAFBQ9Y5Q3 323 aaPredicted RBP12.12□□□□□ -0.47
CLCN3-205ENST00000506924 ANKRD31Q8N7Z5 1873 aa12.12□□□□□ -0.47
CLCN3-205ENST00000506924 ATP10DQ9P241 1426 aa12.11□□□□□ -0.47
CLCN3-205ENST00000506924 USP17L5A8MUK1 530 aa12.11□□□□□ -0.47
CLCN3-205ENST00000506924 DGAT1O75907 488 aa12.11□□□□□ -0.47
CLCN3-205ENST00000506924 AVPP01185 164 aa12.11□□□□□ -0.47
CLCN3-205ENST00000506924 TCIRG1Q13488 830 aa12.11□□□□□ -0.47
CLCN3-205ENST00000506924 PPP1R26Q5T8A7 1209 aaPredicted RBP12.11□□□□□ -0.47
CLCN3-205ENST00000506924 ZNF622Q969S3 477 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLCN3-205ENST00000506924 MYD88Q99836 296 aa12.11□□□□□ -0.47
CLCN3-205ENST00000506924 BRIP1Q9BX63 1249 aa12.11□□□□□ -0.47
CLCN3-205ENST00000506924 KLF16Q9BXK1 252 aaPredicted RBP12.11□□□□□ -0.47
CLCN3-205ENST00000506924 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
CLCN3-205ENST00000506924 BCS1LQ9Y276 419 aa12.11□□□□□ -0.47
CLCN3-205ENST00000506924 ARFGEF2Q9Y6D5 1785 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 ABCC12Q96J65 1359 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 USP4Q13107 963 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 NLRP10Q86W26 655 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 SYNE4Q8N205 404 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 BCL2L13Q9BXK5 485 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 CHMP4AQ9BY43 222 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 MAP3K2Q9Y2U5 619 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 PCDHB11Q9Y5F2 797 aa12.1□□□□□ -0.47
CLCN3-205ENST00000506924 GOLGB1Q14789 3259 aaKnown RBP12.1□□□□□ -0.47
CLCN3-205ENST00000506924 H0YIN7 160 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 GFRA3O60609 400 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 NTSR2O95665 410 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 DDX58O95786 925 aaKnown RBP12.09□□□□□ -0.47
CLCN3-205ENST00000506924 PDE6BP35913 854 aa12.09□□□□□ -0.47
CLCN3-205ENST00000506924 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms