RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CRKP46108 304 aa22.43■■□□□ 1.18
PDLIM7-216ENST00000506537 KIF1BPQ96EK5 621 aa22.43■■□□□ 1.18
PDLIM7-216ENST00000506537 PRMT6Q96LA8 375 aaPredicted RBP22.43■■□□□ 1.18
PDLIM7-216ENST00000506537 SUGT1Q9Y2Z0 365 aa22.43■■□□□ 1.18
PDLIM7-216ENST00000506537 RAB11FIP3O75154 756 aa22.42■■□□□ 1.18
PDLIM7-216ENST00000506537 CST9Q5W186 159 aa22.42■■□□□ 1.18
PDLIM7-216ENST00000506537 AACSQ86V21 672 aa22.42■■□□□ 1.18
PDLIM7-216ENST00000506537 DNAJC5GQ8N7S2 189 aa22.42■■□□□ 1.18
PDLIM7-216ENST00000506537 CREBZFQ9NS37 354 aa22.42■■□□□ 1.18
PDLIM7-216ENST00000506537 TMEM88BA6NKF7 163 aa22.41■■□□□ 1.18
PDLIM7-216ENST00000506537 RBM5P52756 815 aaKnown RBP eCLIP22.41■■□□□ 1.18
PDLIM7-216ENST00000506537 SULF1Q8IWU6 871 aa22.41■■□□□ 1.18
PDLIM7-216ENST00000506537 SPATA5Q8NB90 893 aa22.41■■□□□ 1.18
PDLIM7-216ENST00000506537 UQCRFS1P1P0C7P4 283 aa22.4■■□□□ 1.18
PDLIM7-216ENST00000506537 HDLBPQ00341 1268 aaKnown RBP22.4■■□□□ 1.18
PDLIM7-216ENST00000506537 TTC39AQ5SRH9 613 aa22.4■■□□□ 1.18
PDLIM7-216ENST00000506537 EXOC6Q8TAG9 804 aa22.4■■□□□ 1.18
PDLIM7-216ENST00000506537 DCTPP1Q9H773 170 aa22.4■■□□□ 1.18
PDLIM7-216ENST00000506537 MAST3O60307 1309 aa22.39■■□□□ 1.18
PDLIM7-216ENST00000506537 CLRN2A0PK11 232 aa22.39■■□□□ 1.17
PDLIM7-216ENST00000506537 CELF2O95319 508 aaKnown RBP22.39■■□□□ 1.17
PDLIM7-216ENST00000506537 LDHBP07195 334 aaKnown RBP22.39■■□□□ 1.17
PDLIM7-216ENST00000506537 CCDC158Q5M9N0 1113 aa22.39■■□□□ 1.17
PDLIM7-216ENST00000506537 ZNF512BQ96KM6 892 aaPredicted RBP22.39■■□□□ 1.17
PDLIM7-216ENST00000506537 DIXDC1Q155Q3 683 aa22.38■■□□□ 1.17
PDLIM7-216ENST00000506537 CLASRPQ8N2M8 674 aaKnown RBP22.38■■□□□ 1.17
PDLIM7-216ENST00000506537 TEKT1Q969V4 418 aa22.38■■□□□ 1.17
PDLIM7-216ENST00000506537 CDCA5Q96FF9 252 aa22.38■■□□□ 1.17
PDLIM7-216ENST00000506537 MRIQ9BWK5 157 aa22.38■■□□□ 1.17
PDLIM7-216ENST00000506537 ZNF408Q9H9D4 720 aa22.38■■□□□ 1.17
PDLIM7-216ENST00000506537 SNRKQ9NRH2 765 aa22.38■■□□□ 1.17
PDLIM7-216ENST00000506537 SMARCA5O60264 1052 aaPredicted RBP22.37■■□□□ 1.17
PDLIM7-216ENST00000506537 SPDYE2Q495Y8 402 aa22.37■■□□□ 1.17
PDLIM7-216ENST00000506537 TBC1D9Q6ZT07 1266 aa22.37■■□□□ 1.17
PDLIM7-216ENST00000506537 APOBEC3FQ8IUX4 373 aaKnown RBP22.37■■□□□ 1.17
PDLIM7-216ENST00000506537 ZGPATQ8N5A5 531 aaKnown RBP22.37■■□□□ 1.17
PDLIM7-216ENST00000506537 ZDHHC15Q96MV8 337 aa22.37■■□□□ 1.17
PDLIM7-216ENST00000506537 TDRD3Q9H7E2 651 aaKnown RBP22.37■■□□□ 1.17
PDLIM7-216ENST00000506537 ABCF2Q9UG63 623 aa22.37■■□□□ 1.17
PDLIM7-216ENST00000506537 PRAMEF18Q5VWM3 479 aa22.36■■□□□ 1.17
PDLIM7-216ENST00000506537 APOBEC3HQ6NTF7 200 aaKnown RBP22.36■■□□□ 1.17
PDLIM7-216ENST00000506537 HHIPL2Q6UWX4 724 aa22.36■■□□□ 1.17
PDLIM7-216ENST00000506537 ZNF384Q8TF68 577 aa22.36■■□□□ 1.17
PDLIM7-216ENST00000506537 LRRCC1Q9C099 1032 aa22.36■■□□□ 1.17
PDLIM7-216ENST00000506537 ZNF70Q9UC06 446 aaPredicted RBP22.36■■□□□ 1.17
PDLIM7-216ENST00000506537 DAGLAQ9Y4D2 1042 aa22.36■■□□□ 1.17
PDLIM7-216ENST00000506537 MYH2Q9UKX2 1941 aa22.35■■□□□ 1.17
PDLIM7-216ENST00000506537 MYO1BO43795 1136 aa22.35■■□□□ 1.17
PDLIM7-216ENST00000506537 BCL11AQ9H165 835 aa22.35■■□□□ 1.17
PDLIM7-216ENST00000506537 VEZTQ9HBM0 779 aa22.35■■□□□ 1.17
PDLIM7-216ENST00000506537 MAST2Q6P0Q8 1798 aa22.35■■□□□ 1.17
PDLIM7-216ENST00000506537 MYO5AQ9Y4I1 1855 aaKnown RBP22.34■■□□□ 1.17
PDLIM7-216ENST00000506537 CYP2E1P05181 493 aaPredicted RBP22.34■■□□□ 1.17
PDLIM7-216ENST00000506537 ZAP70P43403 619 aa22.34■■□□□ 1.17
PDLIM7-216ENST00000506537 IRX6P78412 446 aaPredicted RBP22.34■■□□□ 1.17
PDLIM7-216ENST00000506537 AAMPQ13685 434 aa22.34■■□□□ 1.17
PDLIM7-216ENST00000506537 NDUFB9Q9Y6M9 179 aa22.34■■□□□ 1.17
PDLIM7-216ENST00000506537 IFIT2P09913 472 aaKnown RBP22.33■■□□□ 1.17
PDLIM7-216ENST00000506537 MECOMQ03112 1051 aa22.33■■□□□ 1.17
PDLIM7-216ENST00000506537 SPTY2D1Q68D10 685 aaPredicted RBP22.33■■□□□ 1.17
PDLIM7-216ENST00000506537 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.17
PDLIM7-216ENST00000506537 DZIP1Q86YF9 867 aaKnown RBP22.33■■□□□ 1.17
PDLIM7-216ENST00000506537 DEFB129Q9H1M3 183 aa22.33■■□□□ 1.17
PDLIM7-216ENST00000506537 ABT1Q9ULW3 272 aaKnown RBP22.33■■□□□ 1.17
PDLIM7-216ENST00000506537 TLL2Q9Y6L7 1015 aa22.33■■□□□ 1.17
PDLIM7-216ENST00000506537 CNTNAP1P78357 1384 aa22.33■■□□□ 1.17
PDLIM7-216ENST00000506537 GAKO14976 1311 aa22.32■■□□□ 1.16
PDLIM7-216ENST00000506537 CACNB3P54284 484 aa22.32■■□□□ 1.16
PDLIM7-216ENST00000506537 KLRG1Q96E93 195 aa22.32■■□□□ 1.16
PDLIM7-216ENST00000506537 MKRN1Q9UHC7 482 aaKnown RBP22.32■■□□□ 1.16
PDLIM7-216ENST00000506537 SSC5DA1L4H1 1573 aa22.32■■□□□ 1.16
PDLIM7-216ENST00000506537 PAPPA2Q9BXP8 1791 aa22.31■■□□□ 1.16
PDLIM7-216ENST00000506537 RASSF10A6NK89 507 aa22.31■■□□□ 1.16
PDLIM7-216ENST00000506537 HDAC1Q13547 482 aaPredicted RBP22.31■■□□□ 1.16
PDLIM7-216ENST00000506537 SAPCD2Q86UD0 394 aa22.31■■□□□ 1.16
PDLIM7-216ENST00000506537 NSUN4Q96CB9 384 aaKnown RBP22.31■■□□□ 1.16
PDLIM7-216ENST00000506537 GBA2Q9HCG7 927 aaPredicted RBP22.31■■□□□ 1.16
PDLIM7-216ENST00000506537 PIH1D3Q9NQM4 214 aaKnown RBP22.31■■□□□ 1.16
PDLIM7-216ENST00000506537 DOCK2Q92608 1830 aa22.31■■□□□ 1.16
PDLIM7-216ENST00000506537 MROH7-TTC4A0A0A0MT08 1334 aa22.3■■□□□ 1.16
PDLIM7-216ENST00000506537 TCP10L2B9ZVM9 353 aa22.29■■□□□ 1.16
PDLIM7-216ENST00000506537 RASA3Q14644 834 aa22.29■■□□□ 1.16
PDLIM7-216ENST00000506537 COL13A1Q5TAT6 717 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-216ENST00000506537 CDC42EP5Q6NZY7 148 aa22.29■■□□□ 1.16
PDLIM7-216ENST00000506537 FAM163AQ96GL9 167 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-216ENST00000506537 ANTXR1Q9H6X2 564 aa22.29■■□□□ 1.16
PDLIM7-216ENST00000506537 RAI14Q9P0K7 980 aa22.29■■□□□ 1.16
PDLIM7-216ENST00000506537 PPP2R3BQ9Y5P8 575 aa22.29■■□□□ 1.16
PDLIM7-216ENST00000506537 PCNTO95613 3336 aa22.29■■□□□ 1.16
PDLIM7-216ENST00000506537 CDAN1Q8IWY9 1227 aa22.28■■□□□ 1.16
PDLIM7-216ENST00000506537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.28■■□□□ 1.16
PDLIM7-216ENST00000506537 LRP2BPQ9P2M1 347 aa22.28■■□□□ 1.16
PDLIM7-216ENST00000506537 RFX7Q2KHR2 1363 aa22.27■■□□□ 1.16
PDLIM7-216ENST00000506537 TNFAIP1Q13829 316 aa22.27■■□□□ 1.16
PDLIM7-216ENST00000506537 DEFB115Q30KQ5 88 aa22.27■■□□□ 1.16
PDLIM7-216ENST00000506537 MOB2Q70IA6 237 aa22.27■■□□□ 1.16
PDLIM7-216ENST00000506537 TEPSINQ96N21 525 aa22.27■■□□□ 1.16
PDLIM7-216ENST00000506537 TMEM39BQ9GZU3 492 aa22.27■■□□□ 1.16
PDLIM7-216ENST00000506537 CAPN15O75808 1086 aa22.26■■□□□ 1.15
PDLIM7-216ENST00000506537 BTDP43251 543 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms