RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 MFAP1P55081 439 aaKnown RBP8.72□□□□□ -1.01
SMAD5-201ENST00000506223 CAPN12Q6ZSI9 719 aa8.72□□□□□ -1.01
SMAD5-201ENST00000506223 IQSEC3Q9UPP2 1182 aaPredicted RBP8.72□□□□□ -1.01
SMAD5-201ENST00000506223 KDM2BQ8NHM5 1336 aa8.72□□□□□ -1.01
SMAD5-201ENST00000506223 CCDC88AQ3V6T2 1871 aa8.72□□□□□ -1.01
SMAD5-201ENST00000506223 EDC4Q6P2E9 1401 aaKnown RBP8.71□□□□□ -1.01
SMAD5-201ENST00000506223 MAP2P11137 1827 aaKnown RBP8.71□□□□□ -1.01
SMAD5-201ENST00000506223 MEGF6O75095 1541 aa8.71□□□□□ -1.01
SMAD5-201ENST00000506223 SOWAHDA6NJG2 315 aa8.71□□□□□ -1.02
SMAD5-201ENST00000506223 PSMA6P60900 246 aaKnown RBP8.71□□□□□ -1.02
SMAD5-201ENST00000506223 NME9Q86XW9 330 aa8.71□□□□□ -1.02
SMAD5-201ENST00000506223 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
SMAD5-201ENST00000506223 COL26A1Q96A83 441 aa8.71□□□□□ -1.02
SMAD5-201ENST00000506223 VTI1AQ96AJ9 217 aa8.71□□□□□ -1.02
SMAD5-201ENST00000506223 COG3Q96JB2 828 aa8.71□□□□□ -1.02
SMAD5-201ENST00000506223 TSEN34Q9BSV6 310 aaKnown RBP8.71□□□□□ -1.02
SMAD5-201ENST00000506223 A0A1W2PP64 1363 aa8.71□□□□□ -1.02
SMAD5-201ENST00000506223 PALLDQ8WX93 1383 aa8.71□□□□□ -1.02
SMAD5-201ENST00000506223 MMP10P09238 476 aa8.7□□□□□ -1.02
SMAD5-201ENST00000506223 DPEP1P16444 411 aa8.7□□□□□ -1.02
SMAD5-201ENST00000506223 ZNF211Q13398 564 aaPredicted RBP8.7□□□□□ -1.02
SMAD5-201ENST00000506223 LINC00528Q8N1L1 170 aa8.7□□□□□ -1.02
SMAD5-201ENST00000506223 STAG2Q8N3U4 1231 aa8.7□□□□□ -1.02
SMAD5-201ENST00000506223 GTF3C2Q8WUA4 911 aaPredicted RBP8.7□□□□□ -1.02
SMAD5-201ENST00000506223 LTV1Q96GA3 475 aaPredicted RBP8.7□□□□□ -1.02
SMAD5-201ENST00000506223 PUS7Q96PZ0 661 aaKnown RBP8.7□□□□□ -1.02
SMAD5-201ENST00000506223 C2orf49Q9BVC5 232 aaPredicted RBP8.7□□□□□ -1.02
SMAD5-201ENST00000506223 PRDM10Q9NQV6 1147 aa8.7□□□□□ -1.02
SMAD5-201ENST00000506223 RNF181Q9P0P0 153 aa8.7□□□□□ -1.02
SMAD5-201ENST00000506223 EGFL7Q9UHF1 273 aa8.7□□□□□ -1.02
SMAD5-201ENST00000506223 VIRMAQ69YN4 1812 aaKnown RBP8.69□□□□□ -1.02
SMAD5-201ENST00000506223 FAM187AA6NFU0 413 aa8.69□□□□□ -1.02
SMAD5-201ENST00000506223 UPP2O95045 317 aa8.69□□□□□ -1.02
SMAD5-201ENST00000506223 TGFB2P61812 414 aa8.69□□□□□ -1.02
SMAD5-201ENST00000506223 NAA30Q147X3 362 aaPredicted RBP8.69□□□□□ -1.02
SMAD5-201ENST00000506223 CCDC27Q2M243 656 aa8.69□□□□□ -1.02
SMAD5-201ENST00000506223 ZCRB1Q8TBF4 217 aaKnown RBP8.69□□□□□ -1.02
SMAD5-201ENST00000506223 ABHD8Q96I13 439 aa8.69□□□□□ -1.02
SMAD5-201ENST00000506223 ZSCAN10Q96SZ4 725 aaPredicted RBP8.69□□□□□ -1.02
SMAD5-201ENST00000506223 INSM2Q96T92 566 aaPredicted RBP8.69□□□□□ -1.02
SMAD5-201ENST00000506223 CHMP3Q9Y3E7 222 aa8.69□□□□□ -1.02
SMAD5-201ENST00000506223 USP31Q70CQ4 1352 aa8.69□□□□□ -1.02
SMAD5-201ENST00000506223 C4AP0C0L4 1744 aa8.68□□□□□ -1.02
SMAD5-201ENST00000506223 SPINT1O43278 529 aa8.68□□□□□ -1.02
SMAD5-201ENST00000506223 KCNA3P22001 575 aa8.68□□□□□ -1.02
SMAD5-201ENST00000506223 AMPHP49418 695 aa8.68□□□□□ -1.02
SMAD5-201ENST00000506223 MLLT1Q03111 559 aaPredicted RBP8.68□□□□□ -1.02
SMAD5-201ENST00000506223 TMEM214Q6NUQ4 689 aaKnown RBP8.68□□□□□ -1.02
SMAD5-201ENST00000506223 TESK2Q96S53 571 aa8.68□□□□□ -1.02
SMAD5-201ENST00000506223 ANO2Q9NQ90 1003 aa8.68□□□□□ -1.02
SMAD5-201ENST00000506223 DNMT3AQ9Y6K1 912 aaPredicted RBP8.68□□□□□ -1.02
SMAD5-201ENST00000506223 TIAM2Q8IVF5 1701 aa8.68□□□□□ -1.02
SMAD5-201ENST00000506223 SERTM1A2A2V5 107 aa8.67□□□□□ -1.02
SMAD5-201ENST00000506223 H3BRB1 525 aa8.67□□□□□ -1.02
SMAD5-201ENST00000506223 ICMTO60725 284 aa8.67□□□□□ -1.02
SMAD5-201ENST00000506223 GTF2E1P29083 439 aaPredicted RBP8.67□□□□□ -1.02
SMAD5-201ENST00000506223 GPC1P35052 558 aa8.67□□□□□ -1.02
SMAD5-201ENST00000506223 TEAD4Q15561 434 aa8.67□□□□□ -1.02
SMAD5-201ENST00000506223 ZNF295-AS1Q8N0V1 137 aa8.67□□□□□ -1.02
SMAD5-201ENST00000506223 LINC00116Q8NCU8 138 aa8.67□□□□□ -1.02
SMAD5-201ENST00000506223 NSD3Q9BZ95 1437 aa8.67□□□□□ -1.02
SMAD5-201ENST00000506223 TUT1Q9H6E5 874 aaKnown RBP8.67□□□□□ -1.02
SMAD5-201ENST00000506223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.67□□□□□ -1.022e-6■■■■■ 149.1
SMAD5-201ENST00000506223 CD163L1Q9NR16 1453 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 EML1O00423 815 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 AVPP01185 164 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 CTCFP49711 727 aaPredicted RBP8.66□□□□□ -1.02
SMAD5-201ENST00000506223 RNF144AP50876 292 aaPredicted RBP8.66□□□□□ -1.02
SMAD5-201ENST00000506223 LBX1P52954 281 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 MTMR3Q13615 1198 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 MPRIPQ6WCQ1 1025 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 GLYCTKQ8IVS8 523 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 RHBDD1Q8TEB9 315 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 ZDHHC1Q8WTX9 485 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 IP6K1Q92551 441 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 DCAF5Q96JK2 942 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 NIFKQ9BYG3 293 aaKnown RBP8.66□□□□□ -1.02
SMAD5-201ENST00000506223 POLMQ9NP87 494 aaPredicted RBP8.66□□□□□ -1.02
SMAD5-201ENST00000506223 BIN2Q9UBW5 565 aaPredicted RBP8.66□□□□□ -1.02
SMAD5-201ENST00000506223 ZNF232Q9UNY5 417 aa8.66□□□□□ -1.02
SMAD5-201ENST00000506223 SMG6Q86US8 1419 aaKnown RBP8.65□□□□□ -1.02
SMAD5-201ENST00000506223 BMP2P12643 396 aa8.65□□□□□ -1.02
SMAD5-201ENST00000506223 VEGFAP15692 232 aaPredicted RBP8.65□□□□□ -1.02
SMAD5-201ENST00000506223 NOS2P35228 1153 aa8.65□□□□□ -1.02
SMAD5-201ENST00000506223 CTSOP43234 321 aaPredicted RBP8.65□□□□□ -1.02
SMAD5-201ENST00000506223 RGS19P49795 217 aa8.65□□□□□ -1.02
SMAD5-201ENST00000506223 HIRAP54198 1017 aaPredicted RBP8.65□□□□□ -1.02
SMAD5-201ENST00000506223 GNASQ5JWF2 1037 aa8.65□□□□□ -1.02
SMAD5-201ENST00000506223 C6orf118Q5T5N4 469 aa8.65□□□□□ -1.02
SMAD5-201ENST00000506223 SH3PXD2AQ5TCZ1 1133 aa8.65□□□□□ -1.02
SMAD5-201ENST00000506223 FOXD4L5Q5VV16 416 aaPredicted RBP8.65□□□□□ -1.02
SMAD5-201ENST00000506223 MRPL14Q6P1L8 145 aaKnown RBP8.65□□□□□ -1.02
SMAD5-201ENST00000506223 HELQQ8TDG4 1101 aa8.65□□□□□ -1.02
SMAD5-201ENST00000506223 GRIP2Q9C0E4 1043 aa8.65□□□□□ -1.02
SMAD5-201ENST00000506223 PARP3Q9Y6F1 533 aa8.65□□□□□ -1.02
SMAD5-201ENST00000506223 CNTNAP1P78357 1384 aa8.64□□□□□ -1.03
SMAD5-201ENST00000506223 POTECB2RU33 542 aa8.64□□□□□ -1.03
SMAD5-201ENST00000506223 FKBP4Q02790 459 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMAD5-201ENST00000506223 RASSF7Q02833 373 aa8.64□□□□□ -1.03
SMAD5-201ENST00000506223 C16orf46Q6P387 395 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms