RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 CREBZFQ9NS37 354 aa10.31□□□□□ -0.76
HTT-203ENST00000506137 TMOD4Q9NZQ9 345 aa10.31□□□□□ -0.76
HTT-203ENST00000506137 STIM2Q9P246 746 aa10.31□□□□□ -0.76
HTT-203ENST00000506137 ATP6V0A2Q9Y487 856 aa10.31□□□□□ -0.76
HTT-203ENST00000506137 AHDC1Q5TGY3 1603 aaPredicted RBP10.3□□□□□ -0.76
HTT-203ENST00000506137 SMTNL1A8MU46 457 aa10.3□□□□□ -0.76
HTT-203ENST00000506137 GNPATO15228 680 aa10.3□□□□□ -0.76
HTT-203ENST00000506137 ATF7P17544 494 aaPredicted RBP10.3□□□□□ -0.76
HTT-203ENST00000506137 TPD52P55327 224 aaPredicted RBP10.3□□□□□ -0.76
HTT-203ENST00000506137 UBXN2AP68543 259 aa10.3□□□□□ -0.76
HTT-203ENST00000506137 FXNQ16595 210 aa10.3□□□□□ -0.76
HTT-203ENST00000506137 CFAP161Q6P656 301 aa10.3□□□□□ -0.76
HTT-203ENST00000506137 THEMISQ8N1K5 641 aaPredicted RBP10.3□□□□□ -0.76
HTT-203ENST00000506137 TACO1Q9BSH4 297 aaKnown RBP10.3□□□□□ -0.76
HTT-203ENST00000506137 ABCG4Q9H172 646 aa10.3□□□□□ -0.76
HTT-203ENST00000506137 POLR3EQ9NVU0 708 aa10.3□□□□□ -0.76
HTT-203ENST00000506137 TFIP11Q9UBB9 837 aaKnown RBP10.3□□□□□ -0.76
HTT-203ENST00000506137 RABL2AQ9UBK7 228 aaPredicted RBP10.3□□□□□ -0.76
HTT-203ENST00000506137 TRPC5Q9UL62 973 aaPredicted RBP10.3□□□□□ -0.76
HTT-203ENST00000506137 ITM2BQ9Y287 266 aa10.3□□□□□ -0.76
HTT-203ENST00000506137 RRP15Q9Y3B9 282 aaKnown RBP10.3□□□□□ -0.76
HTT-203ENST00000506137 SRGNP10124 158 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 PDE4AP27815 886 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 PDE6BP35913 854 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 BAG6P46379 1132 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 CAMK2BQ13554 666 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 MFSD10Q14728 455 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 AGAP9Q5VTM2 703 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 ALKBH2Q6NS38 261 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 SNX32Q86XE0 403 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 LRRC49Q8IUZ0 686 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 WDR66Q8TBY9 1149 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 RTF1Q92541 710 aaKnown RBP10.29□□□□□ -0.76
HTT-203ENST00000506137 NUDT16Q96DE0 195 aaKnown RBP10.29□□□□□ -0.76
HTT-203ENST00000506137 ACBD3Q9H3P7 528 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 TRMT1Q9NXH9 659 aaKnown RBP10.29□□□□□ -0.76
HTT-203ENST00000506137 FAM184BQ9ULE4 1060 aa10.29□□□□□ -0.76
HTT-203ENST00000506137 ATP7AQ04656 1500 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 TMEM94Q12767 1356 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 LILRB3O75022 631 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 SKAP2O75563 359 aaPredicted RBP10.28□□□□□ -0.76
HTT-203ENST00000506137 GYS1P13807 737 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 ZSCAN26Q16670 478 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 PRPF38BQ5VTL8 546 aaKnown RBP10.28□□□□□ -0.76
HTT-203ENST00000506137 MMS22LQ6ZRQ5 1243 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 USP48Q86UV5 1035 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 ZNF354CQ86Y25 554 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 CKAP2LQ8IYA6 745 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 C2orf49Q9BVC5 232 aaPredicted RBP10.28□□□□□ -0.76
HTT-203ENST00000506137 CCDC113Q9H0I3 377 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 PRKRIP1Q9H875 184 aaPredicted RBP10.28□□□□□ -0.76
HTT-203ENST00000506137 CYP4F11Q9HBI6 524 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 CWC15Q9P013 229 aaKnown RBP10.28□□□□□ -0.76
HTT-203ENST00000506137 ZNF232Q9UNY5 417 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.28□□□□□ -0.76
HTT-203ENST00000506137 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 SQORQ9Y6N5 450 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 MAP3K1Q13233 1512 aa10.28□□□□□ -0.76
HTT-203ENST00000506137 AATKQ6ZMQ8 1374 aa10.27□□□□□ -0.76
HTT-203ENST00000506137 DIP2AQ14689 1571 aa10.27□□□□□ -0.76
HTT-203ENST00000506137 ESPNB1AK53 854 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 CDC45O75419 566 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 HARSP12081 509 aaKnown RBP10.27□□□□□ -0.77
HTT-203ENST00000506137 SLC5A1P13866 664 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 GPSM2P81274 684 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 BRDTQ58F21 947 aaPredicted RBP10.27□□□□□ -0.77
HTT-203ENST00000506137 CCDC122Q5T0U0 273 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 LDLRAD1Q5T700 205 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 TMEM164Q5U3C3 297 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 FAM184AQ8NB25 1140 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 NAF1Q96HR8 494 aaKnown RBP10.27□□□□□ -0.77
HTT-203ENST00000506137 SLX1AQ9BQ83 275 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 UTP14AQ9BVJ6 771 aaKnown RBP10.27□□□□□ -0.77
HTT-203ENST00000506137 VEZTQ9HBM0 779 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 EPB41L4AQ9HCS5 686 aaPredicted RBP10.27□□□□□ -0.77
HTT-203ENST00000506137 PDRG1Q9NUG6 133 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 SEPT10Q9P0V9 454 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 GTF3C4Q9UKN8 822 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 FARP1Q9Y4F1 1045 aaPredicted RBP10.27□□□□□ -0.77
HTT-203ENST00000506137 GOLGA3Q08378 1498 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 SPHKAPQ2M3C7 1700 aa10.27□□□□□ -0.77
HTT-203ENST00000506137 RALGAPBQ86X10 1494 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 H0Y3Z8 333 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 SGTAO43765 313 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 KRT38O76015 456 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 ZSCAN20P17040 1043 aaPredicted RBP10.26□□□□□ -0.77
HTT-203ENST00000506137 ATF3P18847 181 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 PRPHP41219 470 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 SERPINB4P48594 390 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 FANCCQ00597 558 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 LMNB2Q03252 620 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 TRAF1Q13077 416 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 ZBTB17Q13105 803 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 EIF4A2Q14240 407 aaKnown RBP10.26□□□□□ -0.77
HTT-203ENST00000506137 KIAA1614Q5VZ46 1190 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 ZCCHC8Q6NZY4 707 aaKnown RBP10.26□□□□□ -0.77
HTT-203ENST00000506137 CCBE1Q6UXH8 406 aaPredicted RBP10.26□□□□□ -0.77
HTT-203ENST00000506137 EP400NLQ6ZTU2 488 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 ARL10Q8N8L6 244 aa10.26□□□□□ -0.77
HTT-203ENST00000506137 RSRC1Q96IZ7 334 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms