RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 TTLL11Q8NHH1 800 aa8.87□□□□□ -0.99
PPARGC1A-204ENST00000506055 KCNG4Q8TDN1 519 aa8.87□□□□□ -0.99
PPARGC1A-204ENST00000506055 FBXO3Q9UK99 471 aa8.87□□□□□ -0.99
PPARGC1A-204ENST00000506055 COL5A2P05997 1499 aaPredicted RBP8.87□□□□□ -0.99
PPARGC1A-204ENST00000506055 MARCKSP29966 332 aaPredicted RBP8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 DPCR1Q3MIW9 517 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 MYSM1Q5VVJ2 828 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 ISM2Q6H9L7 571 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 NKX2-3Q8TAU0 364 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 AIFM3Q96NN9 605 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 POLR3EQ9NVU0 708 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 KIAA1468Q9P260 1216 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 A0A1W2PQ27 194 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 A0A1W2PQ64 194 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 A0A1W2PQD8 194 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 ANKRD18BA2A2Z9 1011 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 USP27XA6NNY8 438 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 ZNF202O95125 648 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 GIGYF2Q6Y7W6 1299 aaKnown RBP8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 BRAPQ7Z569 592 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 NLRP10Q86W26 655 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 HELBQ8NG08 1087 aaPredicted RBP8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 TEX13AQ9BXU3 409 aaPredicted RBP8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 NBPF3Q9H094 633 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 PIH1D3Q9NQM4 214 aaKnown RBP8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 INCENPQ9NQS7 918 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 TRMT1Q9NXH9 659 aaKnown RBP8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 SLAIN2Q9P270 581 aa8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 TRMT112Q9UI30 125 aaKnown RBP8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 PARP4Q9UKK3 1724 aaKnown RBP8.86□□□□□ -0.99
PPARGC1A-204ENST00000506055 UBR2Q8IWV8 1755 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 IRS4O14654 1257 aaPredicted RBP8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 SLC3A2P08195 630 aaKnown RBP8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 ADD2P35612 726 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 GNL2Q13823 731 aaKnown RBP8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 ANO1Q5XXA6 986 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 CYB5R4Q7L1T6 521 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 TBC1D10CQ8IV04 446 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 PDCL2Q8N4E4 241 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 PHKBQ93100 1093 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 SYTL4Q96C24 671 aaPredicted RBP8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 PLA2G12BQ9BX93 195 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 SENP2Q9HC62 589 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 ANGEL1Q9UNK9 670 aaKnown RBP8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 NWD2Q9ULI1 1742 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 MAP3K15Q6ZN16 1313 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 ZNF532Q9HCE3 1301 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 CCDC69A6NI79 296 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 B4E1Z4 1266 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 YEATS4O95619 227 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 METAP2P50579 478 aaKnown RBP eCLIP8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 CTSWP56202 376 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 CBX1P83916 185 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 KIF23Q02241 960 aaPredicted RBP8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 CEP135Q66GS9 1140 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 NFXL1Q6ZNB6 911 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 MICU3Q86XE3 530 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 ALG1Q9BT22 464 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 MYH15Q9Y2K3 1946 aa8.85□□□□□ -0.99
PPARGC1A-204ENST00000506055 CTIFO43310 598 aaKnown RBP8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 WDHD1O75717 1129 aaPredicted RBP8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 PDE8BO95263 885 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 SMC2O95347 1197 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 PHKA1P46020 1223 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 TTF1Q15361 905 aaPredicted RBP8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 CCDC102BQ68D86 513 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 CCDC112Q8NEF3 446 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 MYL10Q9BUA6 226 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 PRDM10Q9NQV6 1147 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 TBC1D2BQ9UPU7 963 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 PAXBP1Q9Y5B6 917 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 TNS2Q63HR2 1409 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 SPEF2Q9C093 1822 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 SPDYE4A6NLX3 237 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 SMTNL1A8MU46 457 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 NEMFO60524 1076 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 PFKFB1P16118 471 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 CDC27P30260 824 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 RBM6P78332 1123 aaKnown RBP8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 NAA30Q147X3 362 aaPredicted RBP8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 AIDAQ96BJ3 306 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 WWC3Q9ULE0 1092 aa8.84□□□□□ -0.99
PPARGC1A-204ENST00000506055 KDM4FA0A1W2PPD8 638 aa8.84□□□□□ -1
PPARGC1A-204ENST00000506055 SNAP23O00161 211 aa8.84□□□□□ -1
PPARGC1A-204ENST00000506055 PDE6AP16499 860 aa8.84□□□□□ -1
PPARGC1A-204ENST00000506055 CMA1P23946 247 aa8.84□□□□□ -1
PPARGC1A-204ENST00000506055 PTPN14Q15678 1187 aa8.84□□□□□ -1
PPARGC1A-204ENST00000506055 RIC1Q4ADV7 1423 aa8.84□□□□□ -1
PPARGC1A-204ENST00000506055 AXDND1Q5T1B0 1012 aaPredicted RBP8.84□□□□□ -1
PPARGC1A-204ENST00000506055 NBPF11Q86T75 865 aa8.84□□□□□ -1
PPARGC1A-204ENST00000506055 VPS37DQ86XT2 251 aa8.84□□□□□ -1
PPARGC1A-204ENST00000506055 XPO4Q9C0E2 1151 aaKnown RBP8.84□□□□□ -1
PPARGC1A-204ENST00000506055 IFNKQ9P0W0 207 aa8.84□□□□□ -1
PPARGC1A-204ENST00000506055 ZMYM6O95789 1325 aa8.83□□□□□ -1
PPARGC1A-204ENST00000506055 UBE2Q2LH0YL09 131 aa8.83□□□□□ -1
PPARGC1A-204ENST00000506055 CCZ1BP86790 482 aa8.83□□□□□ -1
PPARGC1A-204ENST00000506055 CCZ1P86791 482 aaPredicted RBP8.83□□□□□ -1
PPARGC1A-204ENST00000506055 SLC39A14Q15043 492 aa8.83□□□□□ -1
PPARGC1A-204ENST00000506055 KRT40Q6A162 431 aa8.83□□□□□ -1
PPARGC1A-204ENST00000506055 APOA5Q6Q788 366 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms