RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 CRKP46108 304 aa14.3□□□□□ -0.12
SIL1-208ENST00000505945 CHAF1AQ13111 956 aaPredicted RBP14.3□□□□□ -0.12
SIL1-208ENST00000505945 TNFAIP1Q13829 316 aa14.3□□□□□ -0.12
SIL1-208ENST00000505945 CAVIN4Q5BKX8 364 aa14.3□□□□□ -0.12
SIL1-208ENST00000505945 FBXO46Q6PJ61 603 aaPredicted RBP14.3□□□□□ -0.12
SIL1-208ENST00000505945 ANKRD13AQ8IZ07 590 aa14.3□□□□□ -0.12
SIL1-208ENST00000505945 TEPSINQ96N21 525 aa14.3□□□□□ -0.12
SIL1-208ENST00000505945 USP44Q9H0E7 712 aa14.3□□□□□ -0.12
SIL1-208ENST00000505945 PTPRCP08575 1304 aa14.3□□□□□ -0.12
SIL1-208ENST00000505945 BCAMP50895 628 aa14.29□□□□□ -0.12
SIL1-208ENST00000505945 VGLL2Q8N8G2 317 aa14.29□□□□□ -0.12
SIL1-208ENST00000505945 TMEM39BQ9GZU3 492 aa14.29□□□□□ -0.12
SIL1-208ENST00000505945 ELP3Q9H9T3 547 aa14.29□□□□□ -0.12
SIL1-208ENST00000505945 E9PSI1 815 aa14.28□□□□□ -0.12
SIL1-208ENST00000505945 SLC34A2O95436 690 aa14.28□□□□□ -0.12
SIL1-208ENST00000505945 PTPN18Q99952 460 aa14.28□□□□□ -0.12
SIL1-208ENST00000505945 TNNI2P48788 182 aa14.27□□□□□ -0.13
SIL1-208ENST00000505945 CACNB3P54284 484 aa14.27□□□□□ -0.13
SIL1-208ENST00000505945 SLFN5Q08AF3 891 aa14.27□□□□□ -0.13
SIL1-208ENST00000505945 CRHR2Q13324 411 aa14.27□□□□□ -0.13
SIL1-208ENST00000505945 OTUD7BQ6GQQ9 843 aa14.27□□□□□ -0.13
SIL1-208ENST00000505945 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.27□□□□□ -0.13
SIL1-208ENST00000505945 TBC1D22AQ8WUA7 517 aa14.27□□□□□ -0.13
SIL1-208ENST00000505945 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
SIL1-208ENST00000505945 OPTNQ96CV9 577 aa14.27□□□□□ -0.13
SIL1-208ENST00000505945 CDCA7LQ96GN5 454 aa14.27□□□□□ -0.13
SIL1-208ENST00000505945 TRIM17Q9Y577 477 aa14.27□□□□□ -0.13
SIL1-208ENST00000505945 HDLBPQ00341 1268 aaKnown RBP14.26□□□□□ -0.13
SIL1-208ENST00000505945 OTOP1Q7RTM1 612 aa14.26□□□□□ -0.13
SIL1-208ENST00000505945 TEKT1Q969V4 418 aa14.26□□□□□ -0.13
SIL1-208ENST00000505945 TESPA1A2RU30 521 aaPredicted RBP14.25□□□□□ -0.13
SIL1-208ENST00000505945 IFIT1P09914 478 aaKnown RBP14.25□□□□□ -0.13
SIL1-208ENST00000505945 FGFR2P21802 821 aa14.25□□□□□ -0.13
SIL1-208ENST00000505945 RFX5P48382 616 aaPredicted RBP14.25□□□□□ -0.13
SIL1-208ENST00000505945 MAP3K9P80192 1104 aa14.25□□□□□ -0.13
SIL1-208ENST00000505945 VGLL4Q14135 290 aa14.25□□□□□ -0.13
SIL1-208ENST00000505945 PUM3Q15397 648 aaKnown RBP14.25□□□□□ -0.13
SIL1-208ENST00000505945 MS4A4AQ96JQ5 239 aa14.25□□□□□ -0.13
SIL1-208ENST00000505945 ARAP2Q8WZ64 1704 aa14.24□□□□□ -0.13
SIL1-208ENST00000505945 EYA2O00167 538 aa14.24□□□□□ -0.13
SIL1-208ENST00000505945 APOBEC3HQ6NTF7 200 aaKnown RBP14.24□□□□□ -0.13
SIL1-208ENST00000505945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.24□□□□□ -0.13
SIL1-208ENST00000505945 CD99L2Q8TCZ2 262 aa14.24□□□□□ -0.13
SIL1-208ENST00000505945 ERO1AQ96HE7 468 aa14.24□□□□□ -0.13
SIL1-208ENST00000505945 ZDHHC15Q96MV8 337 aa14.24□□□□□ -0.13
SIL1-208ENST00000505945 MRIQ9BWK5 157 aa14.24□□□□□ -0.13
SIL1-208ENST00000505945 SMC4Q9NTJ3 1288 aa14.24□□□□□ -0.13
SIL1-208ENST00000505945 LAMB1P07942 1786 aa14.24□□□□□ -0.13
SIL1-208ENST00000505945 OTOFQ9HC10 1997 aa14.23□□□□□ -0.13
SIL1-208ENST00000505945 ALDH1L2Q3SY69 923 aa14.23□□□□□ -0.13
SIL1-208ENST00000505945 BRI3BPQ8WY22 251 aa14.23□□□□□ -0.13
SIL1-208ENST00000505945 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
SIL1-208ENST00000505945 CSADQ9Y600 493 aa14.23□□□□□ -0.13
SIL1-208ENST00000505945 KIF16BQ96L93 1317 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 CCL15-CCL14A0A0B4J2E2 113 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 SLC5A1P13866 664 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 CAP1Q01518 475 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 SP3Q02447 781 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 CCL15Q16663 113 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 ATG9AQ7Z3C6 839 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 LPIN2Q92539 896 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 TMOD2Q9NZR1 351 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 PTPN22Q9Y2R2 807 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 SUGT1Q9Y2Z0 365 aa14.22□□□□□ -0.13
SIL1-208ENST00000505945 MAST3O60307 1309 aa14.21□□□□□ -0.13
SIL1-208ENST00000505945 UBTFL1P0CB47 393 aaPredicted RBP14.21□□□□□ -0.13
SIL1-208ENST00000505945 GTF2A2P52657 109 aa14.21□□□□□ -0.13
SIL1-208ENST00000505945 FKBP1CQ5VVH2 108 aa14.21□□□□□ -0.13
SIL1-208ENST00000505945 HHIPL2Q6UWX4 724 aa14.21□□□□□ -0.13
SIL1-208ENST00000505945 FAM83AQ86UY5 434 aa14.21□□□□□ -0.13
SIL1-208ENST00000505945 TRMT2AQ8IZ69 625 aaKnown RBP14.21□□□□□ -0.13
SIL1-208ENST00000505945 FAM43AQ8N2R8 423 aa14.21□□□□□ -0.13
SIL1-208ENST00000505945 WDR66Q8TBY9 1149 aa14.21□□□□□ -0.13
SIL1-208ENST00000505945 ZKSCAN4Q969J2 545 aaPredicted RBP14.21□□□□□ -0.13
SIL1-208ENST00000505945 WRNIP1Q96S55 665 aa14.21□□□□□ -0.13
SIL1-208ENST00000505945 SIL1Q9H173 461 aa14.21□□□□□ -0.13
SIL1-208ENST00000505945 EFCC1Q9HA90 598 aa14.21□□□□□ -0.13
SIL1-208ENST00000505945 NOB1Q9ULX3 412 aaKnown RBP14.21□□□□□ -0.13
SIL1-208ENST00000505945 HTTP42858 3142 aa14.2□□□□□ -0.14
SIL1-208ENST00000505945 SPDYE5A6NIY4 337 aa14.2□□□□□ -0.14
SIL1-208ENST00000505945 TAF1CQ15572 869 aaPredicted RBP14.2□□□□□ -0.14
SIL1-208ENST00000505945 PRPF38BQ5VTL8 546 aaKnown RBP14.2□□□□□ -0.14
SIL1-208ENST00000505945 MIGA2Q7L4E1 593 aa14.2□□□□□ -0.14
SIL1-208ENST00000505945 ZFYVE28Q9HCC9 887 aa14.2□□□□□ -0.14
SIL1-208ENST00000505945 SNCAIPQ9Y6H5 919 aa14.2□□□□□ -0.14
SIL1-208ENST00000505945 KIAA0100Q14667 2235 aaKnown RBP14.19□□□□□ -0.14
SIL1-208ENST00000505945 POTEFA5A3E0 1075 aa14.19□□□□□ -0.14
SIL1-208ENST00000505945 DIXDC1Q155Q3 683 aa14.19□□□□□ -0.14
SIL1-208ENST00000505945 ATP2B3Q16720 1220 aa14.19□□□□□ -0.14
SIL1-208ENST00000505945 INTS3Q68E01 1043 aaKnown RBP14.19□□□□□ -0.14
SIL1-208ENST00000505945 ERO1BQ86YB8 467 aa14.19□□□□□ -0.14
SIL1-208ENST00000505945 HOOK2Q96ED9 719 aa14.19□□□□□ -0.14
SIL1-208ENST00000505945 CEP126Q9P2H0 1117 aa14.19□□□□□ -0.14
SIL1-208ENST00000505945 IRF6O14896 467 aa14.18□□□□□ -0.14
SIL1-208ENST00000505945 CIAO1O76071 339 aa14.18□□□□□ -0.14
SIL1-208ENST00000505945 PRDX5P30044 214 aa14.18□□□□□ -0.14
SIL1-208ENST00000505945 TCP10Q12799 353 aa14.18□□□□□ -0.14
SIL1-208ENST00000505945 FAM151AQ8WW52 585 aa14.18□□□□□ -0.14
SIL1-208ENST00000505945 PA2G4Q9UQ80 394 aaKnown RBP14.18□□□□□ -0.14
SIL1-208ENST00000505945 DAGLAQ9Y4D2 1042 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms