RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 TRAPPC3LQ5T215 181 aa13.3□□□□□ -0.28
NFKB1-205ENST00000505458 PI16Q6UXB8 463 aa13.3□□□□□ -0.28
NFKB1-205ENST00000505458 HELBQ8NG08 1087 aaPredicted RBP13.3□□□□□ -0.28
NFKB1-205ENST00000505458 ANGEL1Q9UNK9 670 aaKnown RBP13.3□□□□□ -0.28
NFKB1-205ENST00000505458 MYO5AQ9Y4I1 1855 aaKnown RBP13.29□□□□□ -0.28
NFKB1-205ENST00000505458 GOLGA6L4A6NEF3 574 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 FIBPO43427 364 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 CHGBP05060 677 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 APPP05067 770 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 RPS8P62241 208 aaKnown RBP13.29□□□□□ -0.28
NFKB1-205ENST00000505458 APOBRQ0VD83 1088 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 TBC1D9BQ66K14 1250 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 GIMAP6Q6P9H5 292 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 MAGEB6Q8N7X4 407 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 BCL2L12Q9HB09 334 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 LRP2BPQ9P2M1 347 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 KIAA1551Q9HCM1 1747 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 RFC4P35249 363 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 GAS2L3Q86XJ1 694 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 TMTC2Q8N394 836 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 BRPF3Q9ULD4 1205 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 WWC3Q9ULE0 1092 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 DNM1Q05193 864 aaKnown RBP13.29□□□□□ -0.28
NFKB1-205ENST00000505458 TRIM44Q96DX7 344 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-205ENST00000505458 PPP1R9BQ96SB3 815 aa13.29□□□□□ -0.28
NFKB1-205ENST00000505458 CPLX1O14810 134 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 MINPP1Q9UNW1 487 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 NID2Q14112 1375 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 LIFRP42702 1097 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 RESTQ13127 1097 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 PPP2R5BQ15173 497 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 TTLL5Q6EMB2 1281 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 IFNL3Q8IZI9 196 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 SPATA32Q96LK8 384 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 DDX19AQ9NUU7 478 aaKnown RBP13.28□□□□□ -0.28
NFKB1-205ENST00000505458 MBD4O95243 580 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 HS1BP3Q53T59 392 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 SPTY2D1Q68D10 685 aaPredicted RBP13.28□□□□□ -0.28
NFKB1-205ENST00000505458 FAM196AQ6ZSG2 479 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 CERS3Q8IU89 383 aa13.28□□□□□ -0.28
NFKB1-205ENST00000505458 GOLGA8BA8MQT2 603 aa13.27□□□□□ -0.28
NFKB1-205ENST00000505458 SGMS1Q86VZ5 419 aa13.27□□□□□ -0.28
NFKB1-205ENST00000505458 KLF18A0A0U1RQI7 1052 aa13.27□□□□□ -0.29
NFKB1-205ENST00000505458 STAG1Q8WVM7 1258 aa13.27□□□□□ -0.29
NFKB1-205ENST00000505458 SYCE3A1L190 88 aa13.27□□□□□ -0.29
NFKB1-205ENST00000505458 BCAMP50895 628 aa13.27□□□□□ -0.29
NFKB1-205ENST00000505458 SYNE3Q6ZMZ3 975 aa13.27□□□□□ -0.29
NFKB1-205ENST00000505458 BRAPQ7Z569 592 aa13.27□□□□□ -0.29
NFKB1-205ENST00000505458 WASF1Q92558 559 aa13.27□□□□□ -0.29
NFKB1-205ENST00000505458 UBR3Q6ZT12 1888 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 SH2B2O14492 632 aaPredicted RBP13.26□□□□□ -0.29
NFKB1-205ENST00000505458 HAND2P61296 217 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 SLFNL1Q499Z3 407 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 AKNAD1Q5T1N1 836 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 FBXO33Q7Z6M2 555 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 ARHGEF1Q92888 912 aaKnown RBP13.26□□□□□ -0.29
NFKB1-205ENST00000505458 ANAPC4Q9UJX5 808 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 LEMD3Q9Y2U8 911 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 CCDC88AQ3V6T2 1871 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 NPHP1O15259 732 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 JAK2O60674 1132 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 TDO2P48775 406 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 SEPT12Q8IYM1 358 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 STK36Q9NRP7 1315 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 ERICH2A1L162 156 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 MFSD6Q6ZSS7 791 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 TMC4Q7Z404 712 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 BRIP1Q9BX63 1249 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 LRRC2Q9BYS8 371 aa13.26□□□□□ -0.29
NFKB1-205ENST00000505458 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
NFKB1-205ENST00000505458 NAP1L2Q9ULW6 460 aaPredicted RBP13.26□□□□□ -0.29
NFKB1-205ENST00000505458 MAGEB6P1A0A0J9YX57 407 aa13.25□□□□□ -0.29
NFKB1-205ENST00000505458 GADD45BO75293 160 aaPredicted RBP13.25□□□□□ -0.29
NFKB1-205ENST00000505458 C15orf52Q6ZUT6 534 aaKnown RBP13.25□□□□□ -0.29
NFKB1-205ENST00000505458 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
NFKB1-205ENST00000505458 CAVIN2O95810 425 aa13.25□□□□□ -0.29
NFKB1-205ENST00000505458 CYP7A1P22680 504 aa13.25□□□□□ -0.29
NFKB1-205ENST00000505458 BICDL1Q6ZP65 573 aa13.25□□□□□ -0.29
NFKB1-205ENST00000505458 RAI14Q9P0K7 980 aa13.25□□□□□ -0.29
NFKB1-205ENST00000505458 SLC4A4Q9Y6R1 1079 aa13.25□□□□□ -0.29
NFKB1-205ENST00000505458 ANTXR2P58335 489 aa13.25□□□□□ -0.29
NFKB1-205ENST00000505458 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
NFKB1-205ENST00000505458 LEO1Q8WVC0 666 aaPredicted RBP13.25□□□□□ -0.29
NFKB1-205ENST00000505458 GDPD2Q9HCC8 539 aa13.25□□□□□ -0.29
NFKB1-205ENST00000505458 HIBADHP31937 336 aaKnown RBP13.24□□□□□ -0.29
NFKB1-205ENST00000505458 GRAPQ13588 217 aa13.24□□□□□ -0.29
NFKB1-205ENST00000505458 GRAPLQ8TC17 118 aaPredicted RBP13.24□□□□□ -0.29
NFKB1-205ENST00000505458 CACNA1SQ13698 1873 aa13.24□□□□□ -0.29
NFKB1-205ENST00000505458 GSG1L2A8MUP6 293 aa13.24□□□□□ -0.29
NFKB1-205ENST00000505458 CTDNEP1O95476 244 aa13.24□□□□□ -0.29
NFKB1-205ENST00000505458 ST5P78524 1137 aa13.24□□□□□ -0.29
NFKB1-205ENST00000505458 TBC1D10CQ8IV04 446 aa13.24□□□□□ -0.29
NFKB1-205ENST00000505458 C8orf76Q96K31 380 aa13.24□□□□□ -0.29
NFKB1-205ENST00000505458 CTAGE5O15320 804 aa13.24□□□□□ -0.29
NFKB1-205ENST00000505458 METAP2P50579 478 aaKnown RBP eCLIP13.24□□□□□ -0.29
NFKB1-205ENST00000505458 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
NFKB1-205ENST00000505458 ZBTB43O43298 467 aa13.23□□□□□ -0.29
NFKB1-205ENST00000505458 SLC3A2P08195 630 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms