RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 RHPN1Q8TCX5 695 aa24.83■■□□□ 1.57
HERC6-205ENST00000504905 TSKSQ9UJT2 592 aa24.83■■□□□ 1.57
HERC6-205ENST00000504905 COL1A1P02452 1464 aaPredicted RBP24.83■■□□□ 1.56
HERC6-205ENST00000504905 POLR2AP24928 1970 aaKnown RBP24.82■■□□□ 1.56
HERC6-205ENST00000504905 KIF1BPQ96EK5 621 aa24.82■■□□□ 1.56
HERC6-205ENST00000504905 TTF2Q9UNY4 1162 aaKnown RBP24.82■■□□□ 1.56
HERC6-205ENST00000504905 MLLT1Q03111 559 aaPredicted RBP24.81■■□□□ 1.56
HERC6-205ENST00000504905 SCARF1Q14162 830 aa24.81■■□□□ 1.56
HERC6-205ENST00000504905 CDC37L1Q7L3B6 337 aa24.81■■□□□ 1.56
HERC6-205ENST00000504905 DBNDD2Q9BQY9 259 aa24.81■■□□□ 1.56
HERC6-205ENST00000504905 PCDHB15Q9Y5E8 787 aa24.81■■□□□ 1.56
HERC6-205ENST00000504905 ZBTB22O15209 634 aa24.8■■□□□ 1.56
HERC6-205ENST00000504905 AAMPQ13685 434 aa24.8■■□□□ 1.56
HERC6-205ENST00000504905 RASGRF1Q13972 1273 aa24.8■■□□□ 1.56
HERC6-205ENST00000504905 DCPSQ96C86 337 aaKnown RBP24.8■■□□□ 1.56
HERC6-205ENST00000504905 EAF2Q96CJ1 260 aaPredicted RBP24.8■■□□□ 1.56
HERC6-205ENST00000504905 IL1RAPL2Q9NP60 686 aa24.8■■□□□ 1.56
HERC6-205ENST00000504905 DLGAP5Q15398 846 aa24.79■■□□□ 1.56
HERC6-205ENST00000504905 CCDC158Q5M9N0 1113 aa24.79■■□□□ 1.56
HERC6-205ENST00000504905 AACSQ86V21 672 aa24.79■■□□□ 1.56
HERC6-205ENST00000504905 CCDC8Q9H0W5 538 aaPredicted RBP24.79■■□□□ 1.56
HERC6-205ENST00000504905 GGA3Q9NZ52 723 aa24.79■■□□□ 1.56
HERC6-205ENST00000504905 SUGT1Q9Y2Z0 365 aa24.79■■□□□ 1.56
HERC6-205ENST00000504905 WNT10BO00744 389 aa24.78■■□□□ 1.56
HERC6-205ENST00000504905 UQCRFS1P1P0C7P4 283 aa24.78■■□□□ 1.56
HERC6-205ENST00000504905 ARID4AP29374 1257 aaPredicted RBP24.78■■□□□ 1.56
HERC6-205ENST00000504905 RBM5P52756 815 aaKnown RBP eCLIP24.78■■□□□ 1.56
HERC6-205ENST00000504905 GRIK5Q16478 980 aa24.78■■□□□ 1.56
HERC6-205ENST00000504905 NBPF9Q3BBW0 867 aa24.78■■□□□ 1.56
HERC6-205ENST00000504905 CFAP100Q494V2 611 aa24.78■■□□□ 1.56
HERC6-205ENST00000504905 TTC39AQ5SRH9 613 aa24.78■■□□□ 1.56
HERC6-205ENST00000504905 CLASRPQ8N2M8 674 aaKnown RBP24.78■■□□□ 1.56
HERC6-205ENST00000504905 ASTN2O75129 1339 aaPredicted RBP24.78■■□□□ 1.56
HERC6-205ENST00000504905 PDS5AQ29RF7 1337 aaKnown RBP24.78■■□□□ 1.56
HERC6-205ENST00000504905 ECM29Q5VYK3 1845 aa24.77■■□□□ 1.56
HERC6-205ENST00000504905 ANGEL2Q5VTE6 544 aaKnown RBP24.77■■□□□ 1.56
HERC6-205ENST00000504905 MTMR14Q8NCE2 650 aa24.77■■□□□ 1.56
HERC6-205ENST00000504905 ZNF408Q9H9D4 720 aa24.77■■□□□ 1.56
HERC6-205ENST00000504905 DBNLQ9UJU6 430 aaKnown RBP24.77■■□□□ 1.56
HERC6-205ENST00000504905 MAST3O60307 1309 aa24.77■■□□□ 1.56
HERC6-205ENST00000504905 KRT26Q7Z3Y9 468 aa24.76■■□□□ 1.55
HERC6-205ENST00000504905 ZGPATQ8N5A5 531 aaKnown RBP24.76■■□□□ 1.55
HERC6-205ENST00000504905 EXOC6Q8TAG9 804 aa24.76■■□□□ 1.55
HERC6-205ENST00000504905 ZBED3Q96IU2 234 aaPredicted RBP24.76■■□□□ 1.55
HERC6-205ENST00000504905 MCOLN1Q9GZU1 580 aa24.76■■□□□ 1.55
HERC6-205ENST00000504905 BCL11AQ9H165 835 aa24.76■■□□□ 1.55
HERC6-205ENST00000504905 TLR7Q9NYK1 1049 aaKnown RBP24.76■■□□□ 1.55
HERC6-205ENST00000504905 SERPINA10Q9UK55 444 aa24.76■■□□□ 1.55
HERC6-205ENST00000504905 SALL1Q9NSC2 1324 aa24.76■■□□□ 1.55
HERC6-205ENST00000504905 NOGQ13253 232 aa24.75■■□□□ 1.55
HERC6-205ENST00000504905 USP48Q86UV5 1035 aa24.75■■□□□ 1.55
HERC6-205ENST00000504905 SULF1Q8IWU6 871 aa24.75■■□□□ 1.55
HERC6-205ENST00000504905 SPATA5Q8NB90 893 aa24.75■■□□□ 1.55
HERC6-205ENST00000504905 LRRCC1Q9C099 1032 aa24.75■■□□□ 1.55
HERC6-205ENST00000504905 DCTPP1Q9H773 170 aa24.75■■□□□ 1.55
HERC6-205ENST00000504905 HMG20BQ9P0W2 317 aa24.75■■□□□ 1.55
HERC6-205ENST00000504905 PITPNM2Q9BZ72 1349 aa24.75■■□□□ 1.55
HERC6-205ENST00000504905 SPDYE2BA6NHP3 402 aa24.74■■□□□ 1.55
HERC6-205ENST00000504905 LDHBP07195 334 aaKnown RBP24.74■■□□□ 1.55
HERC6-205ENST00000504905 SPDYE6P0CI01 402 aa24.74■■□□□ 1.55
HERC6-205ENST00000504905 MCAMP43121 646 aa24.74■■□□□ 1.55
HERC6-205ENST00000504905 CRKP46108 304 aa24.74■■□□□ 1.55
HERC6-205ENST00000504905 HDLBPQ00341 1268 aaKnown RBP24.74■■□□□ 1.55
HERC6-205ENST00000504905 PCDHAC2Q9Y5I4 1007 aa24.74■■□□□ 1.55
HERC6-205ENST00000504905 MYO1BO43795 1136 aa24.73■■□□□ 1.55
HERC6-205ENST00000504905 IFIT2P09913 472 aaKnown RBP24.73■■□□□ 1.55
HERC6-205ENST00000504905 TEKT1Q969V4 418 aa24.73■■□□□ 1.55
HERC6-205ENST00000504905 ABCF2Q9UG63 623 aa24.73■■□□□ 1.55
HERC6-205ENST00000504905 AKAP11Q9UKA4 1901 aa24.73■■□□□ 1.55
HERC6-205ENST00000504905 ADM5C9JUS6 153 aa24.72■■□□□ 1.55
HERC6-205ENST00000504905 PRDX5P30044 214 aa24.72■■□□□ 1.55
HERC6-205ENST00000504905 SPTY2D1Q68D10 685 aaPredicted RBP24.72■■□□□ 1.55
HERC6-205ENST00000504905 PI16Q6UXB8 463 aa24.72■■□□□ 1.55
HERC6-205ENST00000504905 ZNF512BQ96KM6 892 aaPredicted RBP24.72■■□□□ 1.55
HERC6-205ENST00000504905 PRMT6Q96LA8 375 aaPredicted RBP24.72■■□□□ 1.55
HERC6-205ENST00000504905 CASP8AP2Q9UKL3 1982 aa24.72■■□□□ 1.55
HERC6-205ENST00000504905 HUNKP57058 714 aa24.71■■□□□ 1.55
HERC6-205ENST00000504905 IRX6P78412 446 aaPredicted RBP24.71■■□□□ 1.55
HERC6-205ENST00000504905 MRIQ9BWK5 157 aa24.71■■□□□ 1.55
HERC6-205ENST00000504905 APOBEC3FQ8IUX4 373 aaKnown RBP24.7■■□□□ 1.54
HERC6-205ENST00000504905 ZIC5Q96T25 663 aa24.7■■□□□ 1.54
HERC6-205ENST00000504905 SNRKQ9NRH2 765 aa24.7■■□□□ 1.54
HERC6-205ENST00000504905 MYH2Q9UKX2 1941 aa24.69■■□□□ 1.54
HERC6-205ENST00000504905 SMARCA5O60264 1052 aaPredicted RBP24.69■■□□□ 1.54
HERC6-205ENST00000504905 DGKZQ13574 1117 aa24.69■■□□□ 1.54
HERC6-205ENST00000504905 ERICH6Q7L0X2 663 aa24.69■■□□□ 1.54
HERC6-205ENST00000504905 SCAF8Q9UPN6 1271 aaKnown RBP24.69■■□□□ 1.54
HERC6-205ENST00000504905 CLRN2A0PK11 232 aa24.68■■□□□ 1.54
HERC6-205ENST00000504905 HDAC1Q13547 482 aaPredicted RBP24.68■■□□□ 1.54
HERC6-205ENST00000504905 HHIPL2Q6UWX4 724 aa24.68■■□□□ 1.54
HERC6-205ENST00000504905 DZIP1Q86YF9 867 aaKnown RBP24.68■■□□□ 1.54
HERC6-205ENST00000504905 ZDHHC15Q96MV8 337 aa24.68■■□□□ 1.54
HERC6-205ENST00000504905 FAM155AB1AL88 458 aaPredicted RBP24.67■■□□□ 1.54
HERC6-205ENST00000504905 DIXDC1Q155Q3 683 aa24.67■■□□□ 1.54
HERC6-205ENST00000504905 RGMBQ6NW40 437 aa24.67■■□□□ 1.54
HERC6-205ENST00000504905 DLK2Q6UY11 383 aa24.67■■□□□ 1.54
HERC6-205ENST00000504905 TBC1D9Q6ZT07 1266 aa24.67■■□□□ 1.54
HERC6-205ENST00000504905 VEZTQ9HBM0 779 aa24.67■■□□□ 1.54
HERC6-205ENST00000504905 AOX1Q06278 1338 aa24.66■■□□□ 1.54
HERC6-205ENST00000504905 SPDYE2Q495Y8 402 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms