RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 SOX4Q06945 474 aaPredicted RBP6.44□□□□□ -1.38
RFC1-208ENST00000504849 ZSWIM9Q86XI8 627 aa6.44□□□□□ -1.38
RFC1-208ENST00000504849 ANKLE2Q86XL3 938 aa6.44□□□□□ -1.38
RFC1-208ENST00000504849 WWC1Q8IX03 1113 aa6.44□□□□□ -1.38
RFC1-208ENST00000504849 PPP1R16BQ96T49 567 aa6.44□□□□□ -1.38
RFC1-208ENST00000504849 C1GALT1Q9NS00 363 aa6.44□□□□□ -1.38
RFC1-208ENST00000504849 ACIN1Q9UKV3 1341 aaKnown RBP6.44□□□□□ -1.38
RFC1-208ENST00000504849 SOX1O00570 391 aaPredicted RBP6.43□□□□□ -1.38
RFC1-208ENST00000504849 C1QTNF9P0C862 333 aa6.43□□□□□ -1.38
RFC1-208ENST00000504849 KRTAP10-2P60368 255 aa6.43□□□□□ -1.38
RFC1-208ENST00000504849 DPYDQ12882 1025 aa6.43□□□□□ -1.38
RFC1-208ENST00000504849 PLD6Q8N2A8 252 aaKnown RBP6.43□□□□□ -1.38
RFC1-208ENST00000504849 CSRNP1Q96S65 589 aa6.43□□□□□ -1.38
RFC1-208ENST00000504849 USP26Q9BXU7 913 aa6.43□□□□□ -1.38
RFC1-208ENST00000504849 SEMA6CQ9H3T2 930 aa6.43□□□□□ -1.38
RFC1-208ENST00000504849 ACTL7BQ9Y614 415 aa6.43□□□□□ -1.38
RFC1-208ENST00000504849 SHROOM4Q9ULL8 1493 aa6.42□□□□□ -1.38
RFC1-208ENST00000504849 FAM177BA6PVY3 158 aa6.42□□□□□ -1.38
RFC1-208ENST00000504849 PTK7Q13308 1070 aa6.42□□□□□ -1.38
RFC1-208ENST00000504849 EXOSC6Q5RKV6 272 aaKnown RBP6.42□□□□□ -1.38
RFC1-208ENST00000504849 PI4K2BQ8TCG2 481 aa6.42□□□□□ -1.38
RFC1-208ENST00000504849 HHIPQ96QV1 700 aa6.42□□□□□ -1.38
RFC1-208ENST00000504849 YIPF2Q9BWQ6 316 aa6.42□□□□□ -1.38
RFC1-208ENST00000504849 U3KQE9 123 aa6.42□□□□□ -1.38
RFC1-208ENST00000504849 DYNC1LI2O43237 492 aaPredicted RBP6.41□□□□□ -1.38
RFC1-208ENST00000504849 TTC39BQ5VTQ0 682 aaPredicted RBP6.41□□□□□ -1.38
RFC1-208ENST00000504849 SYDE1Q6ZW31 735 aaPredicted RBP6.41□□□□□ -1.38
RFC1-208ENST00000504849 NCAPG2Q86XI2 1143 aa6.41□□□□□ -1.38
RFC1-208ENST00000504849 LIN37Q96GY3 246 aaPredicted RBP6.41□□□□□ -1.38
RFC1-208ENST00000504849 ADH5P11766 374 aa6.4□□□□□ -1.38
RFC1-208ENST00000504849 HOXA5P20719 270 aa6.4□□□□□ -1.38
RFC1-208ENST00000504849 KCNA1Q09470 495 aa6.4□□□□□ -1.38
RFC1-208ENST00000504849 OGFOD3Q6PK18 319 aa6.4□□□□□ -1.38
RFC1-208ENST00000504849 ACSS3Q9H6R3 686 aa6.4□□□□□ -1.38
RFC1-208ENST00000504849 ABI2Q9NYB9 513 aaPredicted RBP6.4□□□□□ -1.38
RFC1-208ENST00000504849 TRPA1O75762 1119 aa6.39□□□□□ -1.39
RFC1-208ENST00000504849 ARL4DP49703 201 aa6.39□□□□□ -1.39
RFC1-208ENST00000504849 MAP7Q14244 749 aa6.39□□□□□ -1.39
RFC1-208ENST00000504849 VN1R5Q7Z5H4 357 aa6.39□□□□□ -1.39
RFC1-208ENST00000504849 NRSN2Q9GZP1 204 aa6.39□□□□□ -1.39
RFC1-208ENST00000504849 DZANK1Q9NVP4 752 aa6.39□□□□□ -1.39
RFC1-208ENST00000504849 KANSL3Q9P2N6 904 aa6.39□□□□□ -1.39
RFC1-208ENST00000504849 ZCCHC6Q5VYS8 1495 aaKnown RBP6.39□□□□□ -1.39
RFC1-208ENST00000504849 E9PSI1 815 aa6.38□□□□□ -1.39
RFC1-208ENST00000504849 BRD1O95696 1058 aa6.38□□□□□ -1.39
RFC1-208ENST00000504849 RAB6AP20340 208 aa6.38□□□□□ -1.39
RFC1-208ENST00000504849 RBM25P49756 843 aaKnown RBP6.38□□□□□ -1.39
RFC1-208ENST00000504849 KRTAP1-1Q07627 177 aa6.38□□□□□ -1.39
RFC1-208ENST00000504849 KCNMB1Q16558 191 aa6.38□□□□□ -1.39
RFC1-208ENST00000504849 NETO1Q8TDF5 533 aa6.38□□□□□ -1.39
RFC1-208ENST00000504849 VTI1AQ96AJ9 217 aa6.38□□□□□ -1.39
RFC1-208ENST00000504849 SALL4Q9UJQ4 1053 aa6.38□□□□□ -1.39
RFC1-208ENST00000504849 VAV3Q9UKW4 847 aa6.38□□□□□ -1.39
RFC1-208ENST00000504849 USTQ9Y2C2 406 aa6.38□□□□□ -1.39
RFC1-208ENST00000504849 PDE2AO00408 941 aaPredicted RBP6.37□□□□□ -1.39
RFC1-208ENST00000504849 PRKCQQ04759 706 aa6.37□□□□□ -1.39
RFC1-208ENST00000504849 PRR23BQ6ZRT6 265 aa6.37□□□□□ -1.39
RFC1-208ENST00000504849 FAM181AQ8N9Y4 354 aa6.37□□□□□ -1.39
RFC1-208ENST00000504849 CALR3Q96L12 384 aaKnown RBP6.37□□□□□ -1.39
RFC1-208ENST00000504849 SAP130Q9H0E3 1048 aa6.37□□□□□ -1.39
RFC1-208ENST00000504849 FAM105AQ9NUU6 356 aa6.37□□□□□ -1.39
RFC1-208ENST00000504849 AMOTL2Q9Y2J4 779 aa6.37□□□□□ -1.39
RFC1-208ENST00000504849 HDGFL1Q5TGJ6 251 aa6.36□□□□□ -1.39
RFC1-208ENST00000504849 PIK3R5Q8WYR1 880 aa6.36□□□□□ -1.39
RFC1-208ENST00000504849 SOX17Q9H6I2 414 aaPredicted RBP6.36□□□□□ -1.39
RFC1-208ENST00000504849 LOC105371045A0A1W2PR82 267 aa6.35□□□□□ -1.39
RFC1-208ENST00000504849 IKBKEQ14164 716 aa6.35□□□□□ -1.39
RFC1-208ENST00000504849 ANKMY2Q8IV38 441 aa6.35□□□□□ -1.39
RFC1-208ENST00000504849 RELTQ969Z4 430 aa6.35□□□□□ -1.39
RFC1-208ENST00000504849 PBXIP1Q96AQ6 731 aa6.35□□□□□ -1.39
RFC1-208ENST00000504849 GSX1Q9H4S2 264 aaPredicted RBP6.35□□□□□ -1.39
RFC1-208ENST00000504849 TMEM63CQ9P1W3 806 aa6.35□□□□□ -1.39
RFC1-208ENST00000504849 CNTN3Q9P232 1028 aa6.35□□□□□ -1.39
RFC1-208ENST00000504849 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.34□□□□□ -1.39
RFC1-208ENST00000504849 NPIPB6E9PJ23 425 aa6.34□□□□□ -1.39
RFC1-208ENST00000504849 TNFRSF10BO14763 440 aa6.34□□□□□ -1.39
RFC1-208ENST00000504849 FKBP5Q13451 457 aaPredicted RBP6.34□□□□□ -1.39
RFC1-208ENST00000504849 FYB2Q5VWT5 728 aa6.34□□□□□ -1.39
RFC1-208ENST00000504849 SLC23A3Q6PIS1 610 aa6.34□□□□□ -1.39
RFC1-208ENST00000504849 LARP1Q6PKG0 1096 aaKnown RBP6.34□□□□□ -1.39
RFC1-208ENST00000504849 DBX2Q6ZNG2 339 aa6.34□□□□□ -1.39
RFC1-208ENST00000504849 CD320Q9NPF0 282 aa6.34□□□□□ -1.39
RFC1-208ENST00000504849 PRDM7Q9NQW5 492 aa6.34□□□□□ -1.39
RFC1-208ENST00000504849 MAFBQ9Y5Q3 323 aaPredicted RBP6.34□□□□□ -1.39
RFC1-208ENST00000504849 CCDC180Q9P1Z9 1646 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L15C9J2P7 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L10C9JJH3 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L13C9JLJ4 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L12C9JPN9 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L11C9JVI0 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L21D6R901 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L18D6R9N7 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L22D6RA61 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L17D6RBQ6 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L19D6RCP7 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L20D6RJB6 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 IGSF3O75054 1194 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 CTSBP07858 339 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 USP17L24Q0WX57 530 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 KANK4Q5T7N3 995 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms