RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 TTF2Q9UNY4 1162 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-212ENST00000504380 PDS5AQ29RF7 1337 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-212ENST00000504380 SALL1Q9NSC2 1324 aa16.16■□□□□ 0.18
PDLIM7-212ENST00000504380 ZBTB22O15209 634 aa16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 LDHBP07195 334 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 USP17L8P0C7I0 530 aa16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 LMOD1P29536 600 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 TBC1D10BQ4KMP7 808 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 ERICH6Q7L0X2 663 aa16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 WDR90Q96KV7 1748 aa16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 PAG1Q9NWQ8 432 aa16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 LRP2BPQ9P2M1 347 aa16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 HACL1Q9UJ83 578 aa16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 ADAMTSL1Q8N6G6 1762 aa16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 MYO3BQ8WXR4 1341 aa16.15■□□□□ 0.18
PDLIM7-212ENST00000504380 H7C1D1 291 aa16.14■□□□□ 0.17
PDLIM7-212ENST00000504380 ERC2O15083 957 aa16.14■□□□□ 0.17
PDLIM7-212ENST00000504380 GLRX3O76003 335 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-212ENST00000504380 RGS3P49796 1198 aa16.14■□□□□ 0.17
PDLIM7-212ENST00000504380 FSTL1Q12841 308 aa16.14■□□□□ 0.17
PDLIM7-212ENST00000504380 DIXDC1Q155Q3 683 aa16.14■□□□□ 0.17
PDLIM7-212ENST00000504380 TRPM4Q8TD43 1214 aa16.14■□□□□ 0.17
PDLIM7-212ENST00000504380 ZNF384Q8TF68 577 aa16.14■□□□□ 0.17
PDLIM7-212ENST00000504380 CAPN15O75808 1086 aa16.13■□□□□ 0.17
PDLIM7-212ENST00000504380 IDH1O75874 414 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-212ENST00000504380 CHGBP05060 677 aa16.13■□□□□ 0.17
PDLIM7-212ENST00000504380 EPHX2P34913 555 aa16.13■□□□□ 0.17
PDLIM7-212ENST00000504380 ZNF280AP59817 542 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-212ENST00000504380 MECOMQ03112 1051 aa16.13■□□□□ 0.17
PDLIM7-212ENST00000504380 SLFNL1Q499Z3 407 aa16.13■□□□□ 0.17
PDLIM7-212ENST00000504380 TAF1DQ9H5J8 278 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-212ENST00000504380 AOX1Q06278 1338 aa16.13■□□□□ 0.17
PDLIM7-212ENST00000504380 CRKP46108 304 aa16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 RBM5P52756 815 aaKnown RBP eCLIP16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 HIRAP54198 1017 aaPredicted RBP16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 CFAP100Q494V2 611 aa16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 EAPPQ56P03 285 aaPredicted RBP16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 SPTY2D1Q68D10 685 aaPredicted RBP16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 DZIP1Q86YF9 867 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 OGFOD1Q8N543 542 aa16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 ZGPATQ8N5A5 531 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 OSBPL3Q9H4L5 887 aa16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 MYOZ2Q9NPC6 264 aa16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 HDAC9Q9UKV0 1011 aa16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 ASTN2O75129 1339 aaPredicted RBP16.12■□□□□ 0.17
PDLIM7-212ENST00000504380 POTEIP0CG38 1075 aa16.11■□□□□ 0.17
PDLIM7-212ENST00000504380 POTEJP0CG39 1038 aa16.11■□□□□ 0.17
PDLIM7-212ENST00000504380 VEGFAP15692 232 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-212ENST00000504380 HTRA3P83110 453 aa16.11■□□□□ 0.17
PDLIM7-212ENST00000504380 KIF4BQ2VIQ3 1234 aa16.11■□□□□ 0.17
PDLIM7-212ENST00000504380 NSUN4Q96CB9 384 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-212ENST00000504380 ADARB2Q9NS39 739 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-212ENST00000504380 SUGT1Q9Y2Z0 365 aa16.11■□□□□ 0.17
PDLIM7-212ENST00000504380 SCN4AP35499 1836 aa16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 IQCA1LA6NCM1 817 aa16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 TRIM6-TRIM34B2RNG4 842 aa16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 GSPT1P15170 499 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 TTF1Q15361 905 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 DLGAP5Q15398 846 aa16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 NBPF9Q3BBW0 867 aa16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 MAGEB6Q8N7X4 407 aa16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 RILPL2Q969X0 211 aa16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 PRMT6Q96LA8 375 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 DOCK2Q92608 1830 aa16.1■□□□□ 0.17
PDLIM7-212ENST00000504380 MYH2Q9UKX2 1941 aa16.09■□□□□ 0.17
PDLIM7-212ENST00000504380 CYP7A1P22680 504 aa16.09■□□□□ 0.17
PDLIM7-212ENST00000504380 TTC22Q5TAA0 569 aa16.09■□□□□ 0.17
PDLIM7-212ENST00000504380 NAA16Q6N069 864 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-212ENST00000504380 ADGRA1Q86SQ6 560 aa16.09■□□□□ 0.17
PDLIM7-212ENST00000504380 TEKT1Q969V4 418 aa16.09■□□□□ 0.17
PDLIM7-212ENST00000504380 SCAF8Q9UPN6 1271 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-212ENST00000504380 DAGLAQ9Y4D2 1042 aa16.09■□□□□ 0.17
PDLIM7-212ENST00000504380 PDE6AP16499 860 aa16.08■□□□□ 0.16
PDLIM7-212ENST00000504380 MAP3K12Q12852 859 aa16.08■□□□□ 0.16
PDLIM7-212ENST00000504380 SLC9C2Q5TAH2 1124 aa16.08■□□□□ 0.16
PDLIM7-212ENST00000504380 KBTBD3Q8NAB2 608 aa16.08■□□□□ 0.16
PDLIM7-212ENST00000504380 ZBED3Q96IU2 234 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-212ENST00000504380 FSD1Q9BTV5 496 aa16.08■□□□□ 0.16
PDLIM7-212ENST00000504380 SERPINA10Q9UK55 444 aa16.08■□□□□ 0.16
PDLIM7-212ENST00000504380 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
PDLIM7-212ENST00000504380 MAST3O60307 1309 aa16.08■□□□□ 0.16
PDLIM7-212ENST00000504380 CLRN2A0PK11 232 aa16.07■□□□□ 0.16
PDLIM7-212ENST00000504380 SPDYE2BA6NHP3 402 aa16.07■□□□□ 0.16
PDLIM7-212ENST00000504380 WNT10BO00744 389 aa16.07■□□□□ 0.16
PDLIM7-212ENST00000504380 SPDYE6P0CI01 402 aa16.07■□□□□ 0.16
PDLIM7-212ENST00000504380 APOBEC3HQ6NTF7 200 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-212ENST00000504380 HHIPL2Q6UWX4 724 aa16.07■□□□□ 0.16
PDLIM7-212ENST00000504380 EVI5LQ96CN4 794 aa16.07■□□□□ 0.16
PDLIM7-212ENST00000504380 TDRD3Q9H7E2 651 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-212ENST00000504380 MROH7-TTC4A0A0A0MT08 1334 aa16.07■□□□□ 0.16
PDLIM7-212ENST00000504380 ZNF532Q9HCE3 1301 aa16.07■□□□□ 0.16
PDLIM7-212ENST00000504380 MAST2Q6P0Q8 1798 aa16.06■□□□□ 0.16
PDLIM7-212ENST00000504380 TCRBV5S4A2TA0A5A2 114 aa16.06■□□□□ 0.16
PDLIM7-212ENST00000504380 ADD2P35612 726 aa16.06■□□□□ 0.16
PDLIM7-212ENST00000504380 BTDP43251 543 aa16.06■□□□□ 0.16
PDLIM7-212ENST00000504380 CACNB3P54284 484 aa16.06■□□□□ 0.16
PDLIM7-212ENST00000504380 DYNLL1P63167 89 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-212ENST00000504380 GSTO1P78417 241 aa16.06■□□□□ 0.16
PDLIM7-212ENST00000504380 HDLBPQ00341 1268 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms