RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
LINC00958-201ENST00000504230 UQCRFS1P1P0C7P4 283 aa13.34□□□□□ -0.27
LINC00958-201ENST00000504230 KLRK1P26718 216 aa13.34□□□□□ -0.27
LINC00958-201ENST00000504230 KIAA2012Q0VF49 1180 aa13.34□□□□□ -0.27
LINC00958-201ENST00000504230 CCDC102BQ68D86 513 aa13.34□□□□□ -0.27
LINC00958-201ENST00000504230 IRS2Q9Y4H2 1338 aa13.34□□□□□ -0.27
LINC00958-201ENST00000504230 ERC2O15083 957 aa13.33□□□□□ -0.28
LINC00958-201ENST00000504230 YBX3P16989 372 aaKnown RBP eCLIP13.33□□□□□ -0.286e-9■□□□□ 9
LINC00958-201ENST00000504230 PDE4AP27815 886 aa13.33□□□□□ -0.28
LINC00958-201ENST00000504230 IARSP41252 1262 aaKnown RBP13.33□□□□□ -0.28
LINC00958-201ENST00000504230 BCAMP50895 628 aa13.33□□□□□ -0.28
LINC00958-201ENST00000504230 FBXO33Q7Z6M2 555 aa13.33□□□□□ -0.28
LINC00958-201ENST00000504230 TXNRD3Q86VQ6 643 aa13.33□□□□□ -0.28
LINC00958-201ENST00000504230 LARGE2Q8N3Y3 721 aa13.33□□□□□ -0.28
LINC00958-201ENST00000504230 OTUD7AQ8TE49 926 aaPredicted RBP13.33□□□□□ -0.28
LINC00958-201ENST00000504230 COA1Q9GZY4 146 aa13.33□□□□□ -0.28
LINC00958-201ENST00000504230 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
LINC00958-201ENST00000504230 ARAP2Q8WZ64 1704 aa13.33□□□□□ -0.28
LINC00958-201ENST00000504230 SALL3Q9BXA9 1300 aa13.33□□□□□ -0.28
LINC00958-201ENST00000504230 FER1L6Q2WGJ9 1857 aa13.33□□□□□ -0.28
LINC00958-201ENST00000504230 FRAT2O75474 233 aaPredicted RBP13.32□□□□□ -0.28
LINC00958-201ENST00000504230 PDE1AP54750 535 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 AOC3Q16853 763 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 PLEKHM2Q8IWE5 1019 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 STAP2Q9UGK3 403 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 AOX1Q06278 1338 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 SEMA3EO15041 775 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 GLRX3O76003 335 aaKnown RBP13.32□□□□□ -0.28
LINC00958-201ENST00000504230 ATP5JP18859 108 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 PHKA1P46020 1223 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 RGS3P49796 1198 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 PODNQ7Z5L7 613 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC00958-201ENST00000504230 ZNF512BQ96KM6 892 aaPredicted RBP13.32□□□□□ -0.28
LINC00958-201ENST00000504230 OSBPL3Q9H4L5 887 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 CD209Q9NNX6 404 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 PCDHGA4Q9Y5G9 962 aa13.32□□□□□ -0.28
LINC00958-201ENST00000504230 ARID4AP29374 1257 aaPredicted RBP13.31□□□□□ -0.28
LINC00958-201ENST00000504230 RASSF7Q02833 373 aa13.31□□□□□ -0.28
LINC00958-201ENST00000504230 JDP2Q8WYK2 163 aa13.31□□□□□ -0.28
LINC00958-201ENST00000504230 DENND2AQ9ULE3 1009 aa13.31□□□□□ -0.28
LINC00958-201ENST00000504230 IL1R1P14778 569 aa13.3□□□□□ -0.28
LINC00958-201ENST00000504230 LMNB1P20700 586 aa13.3□□□□□ -0.28
LINC00958-201ENST00000504230 NIM1KQ8IY84 436 aa13.3□□□□□ -0.28
LINC00958-201ENST00000504230 TDRD7Q8NHU6 1098 aaKnown RBP13.3□□□□□ -0.28
LINC00958-201ENST00000504230 DBNDD1Q9H9R9 158 aa13.3□□□□□ -0.28
LINC00958-201ENST00000504230 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
LINC00958-201ENST00000504230 ECE2O60344 883 aa13.29□□□□□ -0.28
LINC00958-201ENST00000504230 FOXK1P85037 733 aa13.29□□□□□ -0.28
LINC00958-201ENST00000504230 TSHZ3Q63HK5 1081 aa13.29□□□□□ -0.28
LINC00958-201ENST00000504230 SPRYD3Q8NCJ5 442 aa13.29□□□□□ -0.28
LINC00958-201ENST00000504230 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
LINC00958-201ENST00000504230 IQSEC3Q9UPP2 1182 aaPredicted RBP13.29□□□□□ -0.28
LINC00958-201ENST00000504230 SRCAPQ6ZRS2 3230 aa13.29□□□□□ -0.28
LINC00958-201ENST00000504230 NUDT7P0C024 238 aa13.28□□□□□ -0.28
LINC00958-201ENST00000504230 RASGRF1Q13972 1273 aa13.28□□□□□ -0.28
LINC00958-201ENST00000504230 SKAP1Q86WV1 359 aa13.28□□□□□ -0.28
LINC00958-201ENST00000504230 SPATA5Q8NB90 893 aa13.28□□□□□ -0.28
LINC00958-201ENST00000504230 PI4K2BQ8TCG2 481 aa13.28□□□□□ -0.28
LINC00958-201ENST00000504230 ZNRF3Q9ULT6 936 aa13.28□□□□□ -0.28
LINC00958-201ENST00000504230 PDS5AQ29RF7 1337 aaKnown RBP13.28□□□□□ -0.28
LINC00958-201ENST00000504230 MCAMP43121 646 aa13.28□□□□□ -0.28
LINC00958-201ENST00000504230 DNAJC2Q99543 621 aaKnown RBP13.28□□□□□ -0.28
LINC00958-201ENST00000504230 HMG20BQ9P0W2 317 aa13.28□□□□□ -0.28
LINC00958-201ENST00000504230 CHAF1AQ13111 956 aaPredicted RBP13.27□□□□□ -0.29
LINC00958-201ENST00000504230 SCARF1Q14162 830 aa13.27□□□□□ -0.29
LINC00958-201ENST00000504230 WDR66Q8TBY9 1149 aa13.27□□□□□ -0.29
LINC00958-201ENST00000504230 FBXW7Q969H0 707 aa13.27□□□□□ -0.29
LINC00958-201ENST00000504230 HAUS7Q99871 368 aa13.27□□□□□ -0.29
LINC00958-201ENST00000504230 SNRKQ9NRH2 765 aa13.27□□□□□ -0.29
LINC00958-201ENST00000504230 ZAP70P43403 619 aa13.26□□□□□ -0.29
LINC00958-201ENST00000504230 PRELPP51888 382 aa13.26□□□□□ -0.29
LINC00958-201ENST00000504230 GTF2IP78347 998 aa13.26□□□□□ -0.29
LINC00958-201ENST00000504230 TTF1Q15361 905 aaPredicted RBP13.26□□□□□ -0.29
LINC00958-201ENST00000504230 TTC22Q5TAA0 569 aa13.26□□□□□ -0.29
LINC00958-201ENST00000504230 TTLL5Q6EMB2 1281 aa13.26□□□□□ -0.29
LINC00958-201ENST00000504230 TBC1D22AQ8WUA7 517 aa13.26□□□□□ -0.29
LINC00958-201ENST00000504230 RNF181Q9P0P0 153 aa13.26□□□□□ -0.29
LINC00958-201ENST00000504230 FAM205AQ6ZU69 1335 aa13.26□□□□□ -0.29
LINC00958-201ENST00000504230 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
LINC00958-201ENST00000504230 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
LINC00958-201ENST00000504230 TRIM6-TRIM34B2RNG4 842 aa13.25□□□□□ -0.29
LINC00958-201ENST00000504230 EIF6P56537 245 aaKnown RBP13.25□□□□□ -0.29
LINC00958-201ENST00000504230 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
LINC00958-201ENST00000504230 PI16Q6UXB8 463 aa13.25□□□□□ -0.29
LINC00958-201ENST00000504230 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
LINC00958-201ENST00000504230 PLPP6Q8IY26 295 aa13.25□□□□□ -0.29
LINC00958-201ENST00000504230 ZGPATQ8N5A5 531 aaKnown RBP13.25□□□□□ -0.29
LINC00958-201ENST00000504230 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
LINC00958-201ENST00000504230 YDJCA8MPS7 323 aa13.24□□□□□ -0.29
LINC00958-201ENST00000504230 GOLIM4O00461 696 aa13.24□□□□□ -0.29
LINC00958-201ENST00000504230 MAP4K4O95819 1239 aaPredicted RBP13.24□□□□□ -0.29
LINC00958-201ENST00000504230 CYP2E1P05181 493 aaPredicted RBP13.24□□□□□ -0.29
LINC00958-201ENST00000504230 TNIP1Q15025 636 aa13.24□□□□□ -0.29
LINC00958-201ENST00000504230 C9orf131Q5VYM1 1079 aa13.24□□□□□ -0.29
LINC00958-201ENST00000504230 CNTROBQ8N137 903 aa13.24□□□□□ -0.29
LINC00958-201ENST00000504230 NDUFB9Q9Y6M9 179 aa13.24□□□□□ -0.29
LINC00958-201ENST00000504230 SALL1Q9NSC2 1324 aa13.24□□□□□ -0.29
LINC00958-201ENST00000504230 COL1A1P02452 1464 aaPredicted RBP13.24□□□□□ -0.29
LINC00958-201ENST00000504230 COL4A5P29400 1685 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms