RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 MXRA7P84157 204 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 STMN4Q9H169 189 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 SERPINA10Q9UK55 444 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 CTNND2Q9UQB3 1225 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 HS2ST1Q7LGA3 356 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 BRAPQ7Z569 592 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 TRAPPC8Q9Y2L5 1435 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 MAST1Q9Y2H9 1570 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 SKILP12757 684 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 KRT5P13647 590 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 STX17P56962 302 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 DCAF17Q5H9S7 520 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 FAM200AQ8TCP9 573 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 ARHGEF10LQ9HCE6 1279 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 ABCC10Q5T3U5 1492 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 BMS1Q14692 1282 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 TSPYL6Q8N831 410 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 RAB3IL1Q8TBN0 382 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 CCDC77Q9BR77 488 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 MAK16Q9BXY0 300 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 GGA1Q9UJY5 639 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 ATP2A1O14983 1001 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 ZNF174Q15697 407 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 CCDC129Q6ZRS4 1044 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 DHX32Q7L7V1 743 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 ARMT1Q9H993 441 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 FRMD4BQ9Y2L6 1034 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 NDC80O14777 642 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 CHMP2AO43633 222 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 HIBADHP31937 336 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 PUM3Q15397 648 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 CCDC65Q8IXS2 484 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 PLBD2Q8NHP8 589 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 CAPZA3Q96KX2 299 aa8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 CDCA7Q9BWT1 371 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-205ENST00000504178 ATP2C2O75185 946 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 EPB41P11171 864 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 SELENOSQ9BQE4 189 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 TSGA10Q9BZW7 698 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 DNAI1Q9UI46 699 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 NUP153P49790 1475 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 CCT6AP40227 531 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 HSPA2P54652 639 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 CFAP43Q8NDM7 1665 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 MAST3O60307 1309 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 CCNT1O60563 726 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 RAPGEF1Q13905 1077 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 KRT24Q2M2I5 525 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 LETM2Q2VYF4 491 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 PARP10Q53GL7 1025 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 DDX23Q9BUQ8 820 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 EIF6P56537 245 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 PLCB3Q01970 1234 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 WDR44Q5JSH3 913 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 SNX21Q969T3 373 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 CCDC114Q96M63 670 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 SOS1Q07889 1333 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 KRT86O43790 486 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 KIF5AQ12840 1032 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 ADAMTS12P58397 1594 aa8.09□□□□□ -1.11
SYNPO2-205ENST00000504178 VWA3AA6NCI4 1184 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 OPA1O60313 960 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 HARSP12081 509 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC117Q8IWD4 279 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 CALCOCO1Q9P1Z2 691 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 TNNQ9UQP3 1299 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 ZMYM3Q14202 1370 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 PARD3Q8TEW0 1356 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 CALUO43852 315 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 PDE8AO60658 829 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 VAMP4O75379 141 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 TYRO3Q06418 890 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC186Q7Z3E2 898 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC42Q96M95 316 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 METTL22Q9BUU2 404 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 ZNF408Q9H9D4 720 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 PPP1R7Q15435 360 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 SEL1L2Q5TEA6 688 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 DCTPP1Q9H773 170 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 RPL13P26373 211 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 TNNI3KQ59H18 835 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 PRIMPOLQ96LW4 560 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 FNBP1Q96RU3 617 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 WDR70Q9NW82 654 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 FPGT-TNNI3KV9GXZ4 949 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 ELP1O95163 1332 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 UHRF1BP1Q6BDS2 1440 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 B4E1Z4 1266 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 ATP2A2P16615 1042 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 CHMLP26374 656 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 CFAP58Q5T655 872 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 GOLGA1Q92805 767 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 KIFAP3Q92845 792 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 FAM89AQ96GI7 184 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 XAGE2Q96GT9 111 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 GUCA1BQ9UMX6 200 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 ATP6V0A2Q9Y487 856 aa8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 RPS6KB1P23443 525 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms