RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 BRPF1P55201 1214 aaPredicted RBP4.9□□□□□ -1.63
USP46-205ENST00000504078 HUNKP57058 714 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 CC2D1BQ5T0F9 858 aaKnown RBP4.9□□□□□ -1.63
USP46-205ENST00000504078 PRPF38BQ5VTL8 546 aaKnown RBP4.9□□□□□ -1.63
USP46-205ENST00000504078 NBPF10Q6P3W6 841 aaKnown RBP4.9□□□□□ -1.63
USP46-205ENST00000504078 GPIHBP1Q8IV16 184 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 RTKN2Q8IZC4 609 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 NBPF15Q8N660 670 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 IL17REQ8NFR9 667 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 RPGRQ92834 1020 aaKnown RBP4.9□□□□□ -1.63
USP46-205ENST00000504078 FMNL2Q96PY5 1086 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 USP16Q9Y5T5 823 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 UBN2Q6ZU65 1347 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 TRPA1O75762 1119 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 EGFRP00533 1210 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 HSPA5P11021 654 aaKnown RBP4.89□□□□□ -1.63
USP46-205ENST00000504078 DCTN1Q14203 1278 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 MCM10Q7L590 875 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 USP48Q86UV5 1035 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 PHOX2BQ99453 314 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 BCL2L13Q9BXK5 485 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 ZBTB3Q9H5J0 574 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 ADARB2Q9NS39 739 aaKnown RBP4.89□□□□□ -1.63
USP46-205ENST00000504078 GPRC5DQ9NZD1 345 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 SCAF8Q9UPN6 1271 aaKnown RBP4.89□□□□□ -1.63
USP46-205ENST00000504078 ZNF652Q9Y2D9 606 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 TAF1P21675 1872 aa4.89□□□□□ -1.63
USP46-205ENST00000504078 ASTN2O75129 1339 aaPredicted RBP4.89□□□□□ -1.63
USP46-205ENST00000504078 KDM3BQ7LBC6 1761 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 NUP98P52948 1817 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 BTBD11A6QL63 1104 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 GNAT3A8MTJ3 354 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 DIAPH1O60610 1272 aaKnown RBP4.88□□□□□ -1.63
USP46-205ENST00000504078 CCNYL3P0C7X3 344 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 BMP2P12643 396 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 MYL6BP14649 208 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 PRKAR2BP31323 418 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 MAP2K2P36507 400 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 HIRAP54198 1017 aaPredicted RBP4.88□□□□□ -1.63
USP46-205ENST00000504078 KIF23Q02241 960 aaPredicted RBP4.88□□□□□ -1.63
USP46-205ENST00000504078 CXCL9Q07325 125 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 TBC1D10BQ4KMP7 808 aaPredicted RBP4.88□□□□□ -1.63
USP46-205ENST00000504078 TTLL7Q6ZT98 887 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 USP50Q70EL3 339 aaPredicted RBP4.88□□□□□ -1.63
USP46-205ENST00000504078 RETREG3Q86VR2 466 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 PSMD1Q99460 953 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 ABCC4O15439 1325 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 LRRC37AA6NMS7 1700 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 CEMIPQ8WUJ3 1361 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 ANKRD36CQ5JPF3 1778 aa4.88□□□□□ -1.63
USP46-205ENST00000504078 DDX60Q8IY21 1712 aaKnown RBP4.87□□□□□ -1.63
USP46-205ENST00000504078 YDJCA8MPS7 323 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 FAM155AB1AL88 458 aaPredicted RBP4.87□□□□□ -1.63
USP46-205ENST00000504078 HOXA2O43364 376 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 CA12O43570 354 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 ZIC2O95409 532 aaPredicted RBP4.87□□□□□ -1.63
USP46-205ENST00000504078 NOGQ13253 232 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.87□□□□□ -1.63
USP46-205ENST00000504078 C6orf118Q5T5N4 469 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 SUSD4Q5VX71 490 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 GAS2L2Q8NHY3 880 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 FAM174AQ8TBP5 190 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 BAP1Q92560 729 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 CDK15Q96Q40 435 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 SPOCK3Q9BQ16 436 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 UNC93B1Q9H1C4 597 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 DBNDD1Q9H9R9 158 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 GBA2Q9HCG7 927 aaPredicted RBP4.87□□□□□ -1.63
USP46-205ENST00000504078 EVA1BQ9NVM1 165 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 RNF186Q9NXI6 227 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 MIS18AQ9NYP9 233 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 GGA3Q9NZ52 723 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 KNSTRNQ9Y448 316 aa4.87□□□□□ -1.63
USP46-205ENST00000504078 PAPPA2Q9BXP8 1791 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 AKAP11Q9UKA4 1901 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 KLRG2A4D1S0 409 aaPredicted RBP4.86□□□□□ -1.63
USP46-205ENST00000504078 SPTLC1O15269 473 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 NTSR2O95665 410 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 ANXA1P04083 346 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 MS4A1P11836 297 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 ALDH1B1P30837 517 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 ZNF157P51786 506 aaPredicted RBP4.86□□□□□ -1.63
USP46-205ENST00000504078 NR5A1Q13285 461 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 PLA2G4EQ3MJ16 856 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 CRY2Q49AN0 593 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 RGMBQ6NW40 437 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 DPP8Q6V1X1 898 aaPredicted RBP4.86□□□□□ -1.63
USP46-205ENST00000504078 TPTE2Q6XPS3 522 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 KIF6Q6ZMV9 814 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 MOB2Q70IA6 237 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 KRT26Q7Z3Y9 468 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 CTU1Q7Z7A3 348 aaKnown RBP4.86□□□□□ -1.63
USP46-205ENST00000504078 RASAL3Q86YV0 1011 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 Q8N3U1 123 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 ZNF511Q8NB15 262 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 WHAMMQ8TF30 809 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 PHACTR3Q96KR7 559 aa4.86□□□□□ -1.63
USP46-205ENST00000504078 THUMPD2Q9BTF0 503 aaKnown RBP4.86□□□□□ -1.63
USP46-205ENST00000504078 RRP7AQ9Y3A4 280 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms