RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 CCDC8Q9H0W5 538 aaPredicted RBP25.39■■□□□ 1.66
PDGFRA-203ENST00000503856 MKRN1Q9UHC7 482 aaKnown RBP25.39■■□□□ 1.66
PDGFRA-203ENST00000503856 ABT1Q9ULW3 272 aaKnown RBP25.39■■□□□ 1.66
PDGFRA-203ENST00000503856 SALL1Q9NSC2 1324 aa25.38■■□□□ 1.65
PDGFRA-203ENST00000503856 CLRN2A0PK11 232 aa25.38■■□□□ 1.65
PDGFRA-203ENST00000503856 MYO1BO43795 1136 aa25.38■■□□□ 1.65
PDGFRA-203ENST00000503856 ARID4AP29374 1257 aaPredicted RBP25.38■■□□□ 1.65
PDGFRA-203ENST00000503856 PRDX5P30044 214 aa25.38■■□□□ 1.65
PDGFRA-203ENST00000503856 CDCA5Q96FF9 252 aa25.38■■□□□ 1.65
PDGFRA-203ENST00000503856 HMG20BQ9P0W2 317 aa25.38■■□□□ 1.65
PDGFRA-203ENST00000503856 MAST3O60307 1309 aa25.37■■□□□ 1.65
PDGFRA-203ENST00000503856 PDS5AQ29RF7 1337 aaKnown RBP25.37■■□□□ 1.65
PDGFRA-203ENST00000503856 MYO5AQ9Y4I1 1855 aaKnown RBP25.37■■□□□ 1.65
PDGFRA-203ENST00000503856 PRAMEF18Q5VWM3 479 aa25.37■■□□□ 1.65
PDGFRA-203ENST00000503856 APOBEC3FQ8IUX4 373 aaKnown RBP25.37■■□□□ 1.65
PDGFRA-203ENST00000503856 TEKT1Q969V4 418 aa25.37■■□□□ 1.65
PDGFRA-203ENST00000503856 MRIQ9BWK5 157 aa25.37■■□□□ 1.65
PDGFRA-203ENST00000503856 IL1RAPL2Q9NP60 686 aa25.37■■□□□ 1.65
PDGFRA-203ENST00000503856 TLR7Q9NYK1 1049 aaKnown RBP25.37■■□□□ 1.65
PDGFRA-203ENST00000503856 DBNLQ9UJU6 430 aaKnown RBP25.37■■□□□ 1.65
PDGFRA-203ENST00000503856 LDHBP07195 334 aaKnown RBP25.36■■□□□ 1.65
PDGFRA-203ENST00000503856 UQCRFS1P1P0C7P4 283 aa25.36■■□□□ 1.65
PDGFRA-203ENST00000503856 CCDC158Q5M9N0 1113 aa25.36■■□□□ 1.65
PDGFRA-203ENST00000503856 PI16Q6UXB8 463 aa25.36■■□□□ 1.65
PDGFRA-203ENST00000503856 KIF1BPQ96EK5 621 aa25.36■■□□□ 1.65
PDGFRA-203ENST00000503856 TDRD3Q9H7E2 651 aaKnown RBP25.36■■□□□ 1.65
PDGFRA-203ENST00000503856 CNTNAP1P78357 1384 aa25.35■■□□□ 1.65
PDGFRA-203ENST00000503856 MCAMP43121 646 aa25.35■■□□□ 1.65
PDGFRA-203ENST00000503856 TTC39AQ5SRH9 613 aa25.35■■□□□ 1.65
PDGFRA-203ENST00000503856 AACSQ86V21 672 aa25.35■■□□□ 1.65
PDGFRA-203ENST00000503856 ZGPATQ8N5A5 531 aaKnown RBP25.35■■□□□ 1.65
PDGFRA-203ENST00000503856 SPATA5Q8NB90 893 aa25.35■■□□□ 1.65
PDGFRA-203ENST00000503856 ABCF2Q9UG63 623 aa25.35■■□□□ 1.65
PDGFRA-203ENST00000503856 TLL2Q9Y6L7 1015 aa25.35■■□□□ 1.65
PDGFRA-203ENST00000503856 RASSF10A6NK89 507 aa25.34■■□□□ 1.65
PDGFRA-203ENST00000503856 RAB11FIP3O75154 756 aa25.34■■□□□ 1.65
PDGFRA-203ENST00000503856 DEFB115Q30KQ5 88 aa25.34■■□□□ 1.65
PDGFRA-203ENST00000503856 HHIPL2Q6UWX4 724 aa25.34■■□□□ 1.65
PDGFRA-203ENST00000503856 VEZTQ9HBM0 779 aa25.34■■□□□ 1.65
PDGFRA-203ENST00000503856 GBA2Q9HCG7 927 aaPredicted RBP25.34■■□□□ 1.65
PDGFRA-203ENST00000503856 ZNF70Q9UC06 446 aaPredicted RBP25.34■■□□□ 1.65
PDGFRA-203ENST00000503856 PCDHB15Q9Y5E8 787 aa25.34■■□□□ 1.65
PDGFRA-203ENST00000503856 DIXDC1Q155Q3 683 aa25.33■■□□□ 1.65
PDGFRA-203ENST00000503856 SPDYE2Q495Y8 402 aa25.33■■□□□ 1.65
PDGFRA-203ENST00000503856 SAPCD2Q86UD0 394 aa25.33■■□□□ 1.65
PDGFRA-203ENST00000503856 ZDHHC15Q96MV8 337 aa25.33■■□□□ 1.65
PDGFRA-203ENST00000503856 DEFB129Q9H1M3 183 aa25.33■■□□□ 1.65
PDGFRA-203ENST00000503856 SUPT16HQ9Y5B9 1047 aaKnown RBP25.33■■□□□ 1.65
PDGFRA-203ENST00000503856 BCL11AQ9H165 835 aa25.32■■□□□ 1.64
PDGFRA-203ENST00000503856 SNRKQ9NRH2 765 aa25.32■■□□□ 1.64
PDGFRA-203ENST00000503856 SPTY2D1Q68D10 685 aaPredicted RBP25.31■■□□□ 1.64
PDGFRA-203ENST00000503856 APOBEC3HQ6NTF7 200 aaKnown RBP25.31■■□□□ 1.64
PDGFRA-203ENST00000503856 TBC1D9Q6ZT07 1266 aa25.31■■□□□ 1.64
PDGFRA-203ENST00000503856 CLASRPQ8N2M8 674 aaKnown RBP25.31■■□□□ 1.64
PDGFRA-203ENST00000503856 C2orf69Q8N8R5 385 aa25.31■■□□□ 1.64
PDGFRA-203ENST00000503856 ZNF512BQ96KM6 892 aaPredicted RBP25.31■■□□□ 1.64
PDGFRA-203ENST00000503856 VEGFBP49765 207 aa25.3■■□□□ 1.64
PDGFRA-203ENST00000503856 DAGLAQ9Y4D2 1042 aa25.3■■□□□ 1.64
PDGFRA-203ENST00000503856 PAXIP1Q6ZW49 1069 aaPredicted RBP25.29■■□□□ 1.64
PDGFRA-203ENST00000503856 ERICH6Q7L0X2 663 aa25.29■■□□□ 1.64
PDGFRA-203ENST00000503856 JMYQ8N9B5 988 aa25.29■■□□□ 1.64
PDGFRA-203ENST00000503856 DCTPP1Q9H773 170 aa25.29■■□□□ 1.64
PDGFRA-203ENST00000503856 AK9Q5TCS8 1911 aa25.29■■□□□ 1.64
PDGFRA-203ENST00000503856 PAPPA2Q9BXP8 1791 aa25.28■■□□□ 1.64
PDGFRA-203ENST00000503856 HUNKP57058 714 aa25.28■■□□□ 1.64
PDGFRA-203ENST00000503856 RASA3Q14644 834 aa25.28■■□□□ 1.64
PDGFRA-203ENST00000503856 DZIP1Q86YF9 867 aaKnown RBP25.28■■□□□ 1.64
PDGFRA-203ENST00000503856 TCP10L2B9ZVM9 353 aa25.27■■□□□ 1.64
PDGFRA-203ENST00000503856 CACNB3P54284 484 aa25.27■■□□□ 1.64
PDGFRA-203ENST00000503856 TNFAIP1Q13829 316 aa25.27■■□□□ 1.64
PDGFRA-203ENST00000503856 CYP4F22Q6NT55 531 aa25.27■■□□□ 1.64
PDGFRA-203ENST00000503856 LRRCC1Q9C099 1032 aa25.27■■□□□ 1.64
PDGFRA-203ENST00000503856 PPP2R3BQ9Y5P8 575 aa25.27■■□□□ 1.64
PDGFRA-203ENST00000503856 SMARCA5O60264 1052 aaPredicted RBP25.26■■□□□ 1.63
PDGFRA-203ENST00000503856 CYP2E1P05181 493 aaPredicted RBP25.26■■□□□ 1.63
PDGFRA-203ENST00000503856 IFIT2P09913 472 aaKnown RBP25.26■■□□□ 1.63
PDGFRA-203ENST00000503856 NF2P35240 595 aa25.26■■□□□ 1.63
PDGFRA-203ENST00000503856 ZAP70P43403 619 aa25.26■■□□□ 1.63
PDGFRA-203ENST00000503856 MECOMQ03112 1051 aa25.26■■□□□ 1.63
PDGFRA-203ENST00000503856 MOB2Q70IA6 237 aa25.26■■□□□ 1.63
PDGFRA-203ENST00000503856 ZNF384Q8TF68 577 aa25.26■■□□□ 1.63
PDGFRA-203ENST00000503856 HHIPL1Q96JK4 782 aa25.26■■□□□ 1.63
PDGFRA-203ENST00000503856 CAPNS2Q96L46 248 aa25.26■■□□□ 1.63
PDGFRA-203ENST00000503856 GRM1Q13255 1194 aa25.25■■□□□ 1.63
PDGFRA-203ENST00000503856 TMOD2Q9NZR1 351 aa25.25■■□□□ 1.63
PDGFRA-203ENST00000503856 RAI14Q9P0K7 980 aa25.25■■□□□ 1.63
PDGFRA-203ENST00000503856 LRP2BPQ9P2M1 347 aa25.25■■□□□ 1.63
PDGFRA-203ENST00000503856 WDR33Q9C0J8 1336 aaKnown RBP25.25■■□□□ 1.63
PDGFRA-203ENST00000503856 GAKO14976 1311 aa25.24■■□□□ 1.63
PDGFRA-203ENST00000503856 FKBP1BP68106 108 aa25.24■■□□□ 1.63
PDGFRA-203ENST00000503856 NBPF12Q5TAG4 269 aaPredicted RBP25.24■■□□□ 1.63
PDGFRA-203ENST00000503856 CDC42EP5Q6NZY7 148 aa25.24■■□□□ 1.63
PDGFRA-203ENST00000503856 SLF2Q8IX21 1173 aa25.24■■□□□ 1.63
PDGFRA-203ENST00000503856 NSUN4Q96CB9 384 aaKnown RBP25.24■■□□□ 1.63
PDGFRA-203ENST00000503856 FAM163AQ96GL9 167 aaPredicted RBP25.24■■□□□ 1.63
PDGFRA-203ENST00000503856 TNNI2P48788 182 aa25.23■■□□□ 1.63
PDGFRA-203ENST00000503856 PRKG1Q13976 671 aa25.23■■□□□ 1.63
PDGFRA-203ENST00000503856 TTLL12Q14166 644 aaPredicted RBP25.23■■□□□ 1.63
PDGFRA-203ENST00000503856 EXOC6Q8TAG9 804 aa25.23■■□□□ 1.63
PDGFRA-203ENST00000503856 TMEM39BQ9GZU3 492 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms