RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 CCDC87Q9NVE4 849 aa18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 SYNMO15061 1565 aa18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 A1BGP04217 495 aa18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 HOOK3Q86VS8 718 aa18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 MCM9Q9NXL9 1143 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 NLRP1Q9C000 1473 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 CTAGE9A4FU28 777 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 CNBD1Q8NA66 436 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 SHROOM2Q13796 1616 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 F8W031 263 aaPredicted RBP18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 NEBLO76041 1014 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 GOLGA1Q92805 767 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 DHX58Q96C10 678 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 RBM17Q96I25 401 aaKnown RBP18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 TIGD1Q96MW7 591 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 SPAG5Q96R06 1193 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 KDM5CP41229 1560 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 TBCAO75347 108 aaKnown RBP18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 KRT83P78385 493 aa18.35■□□□□ 0.53
HMGXB3-202ENST00000503427 MACROD2A1Z1Q3 448 aa18.34■□□□□ 0.53
HMGXB3-202ENST00000503427 TIMM10P62072 90 aa18.34■□□□□ 0.53
HMGXB3-202ENST00000503427 GTPBP4Q9BZE4 634 aaKnown RBP18.34■□□□□ 0.53
HMGXB3-202ENST00000503427 RBSNQ9H1K0 784 aa18.34■□□□□ 0.53
HMGXB3-202ENST00000503427 TACC1O75410 805 aa18.34■□□□□ 0.53
HMGXB3-202ENST00000503427 WDR78Q5VTH9 848 aa18.34■□□□□ 0.53
HMGXB3-202ENST00000503427 MIGA1Q8NAN2 632 aa18.34■□□□□ 0.53
HMGXB3-202ENST00000503427 IFNKQ9P0W0 207 aa18.34■□□□□ 0.53
HMGXB3-202ENST00000503427 SYCP3Q8IZU3 236 aa18.33■□□□□ 0.53
HMGXB3-202ENST00000503427 SUCLG2Q96I99 432 aa18.33■□□□□ 0.53
HMGXB3-202ENST00000503427 UGGT1Q9NYU2 1555 aa18.33■□□□□ 0.53
HMGXB3-202ENST00000503427 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.33■□□□□ 0.53
HMGXB3-202ENST00000503427 DNAJC10Q8IXB1 793 aa18.33■□□□□ 0.53
HMGXB3-202ENST00000503427 PICALMQ13492 652 aa18.33■□□□□ 0.52
HMGXB3-202ENST00000503427 DBNDD2Q9BQY9 259 aa18.33■□□□□ 0.52
HMGXB3-202ENST00000503427 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
HMGXB3-202ENST00000503427 KIF1BO60333 1816 aa18.33■□□□□ 0.52
HMGXB3-202ENST00000503427 GOLGA6L10A0A0M3HER8 536 aa18.33■□□□□ 0.52
HMGXB3-202ENST00000503427 FAM160A1Q05DH4 1040 aa18.33■□□□□ 0.52
HMGXB3-202ENST00000503427 CHST3Q7LGC8 479 aa18.33■□□□□ 0.52
HMGXB3-202ENST00000503427 HEATR3Q7Z4Q2 680 aa18.33■□□□□ 0.52
HMGXB3-202ENST00000503427 CCDC94Q9BW85 323 aaPredicted RBP18.33■□□□□ 0.52
HMGXB3-202ENST00000503427 ABCC4O15439 1325 aa18.33■□□□□ 0.52
HMGXB3-202ENST00000503427 KRT86O43790 486 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 IVLP07476 585 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 MCM6Q14566 821 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 SPECC1LQ69YQ0 1117 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 GIGYF2Q6Y7W6 1299 aaKnown RBP18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 RPS6KB1P23443 525 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 ZNF445P59923 1031 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 PAXIP1Q6ZW49 1069 aaPredicted RBP18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 C6orf50Q9HD87 102 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 PHKG2P15735 406 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 ASIC1P78348 528 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 IL17REQ8NFR9 667 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 GIGYF1O75420 1035 aaPredicted RBP18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 KIAA0753Q2KHM9 967 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 SCLT1Q96NL6 688 aa18.32■□□□□ 0.52
HMGXB3-202ENST00000503427 NAPAP54920 295 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 DDX17Q92841 729 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 ERBB4Q15303 1308 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 MBD4O95243 580 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 BBXQ8WY36 941 aaPredicted RBP18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 APPBP2Q92624 585 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 XAGE2Q96GT9 111 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 PNMA6EA0A0J9YXQ4 647 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 CTNNA2P26232 953 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 KRT2P35908 639 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 UBE2Q2Q8WVN8 375 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 MPHOSPH6Q99547 160 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 ZMYND15Q9H091 742 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 TUBBP07437 444 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 KIF5AQ12840 1032 aa18.31■□□□□ 0.52
HMGXB3-202ENST00000503427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.31■□□□□ 0.522e-6■□□□□ 10.2
HMGXB3-202ENST00000503427 PLVAPQ9BX97 442 aa18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 ARAP3Q8WWN8 1544 aa18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 NPHP4O75161 1426 aaPredicted RBP18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 MYL5Q02045 173 aa18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 TTC6Q86TZ1 520 aa18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 TBC1D5Q92609 795 aa18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 SELENOOQ9BVL4 669 aa18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 V9GYY5 206 aaPredicted RBP18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 ELP1O95163 1332 aa18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 KRI1Q8N9T8 703 aaKnown RBP18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 LLPHQ9BRT6 129 aaKnown RBP18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 OPA1O60313 960 aa18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 HIBADHP31937 336 aaKnown RBP18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 LPIN2Q92539 896 aa18.3■□□□□ 0.52
HMGXB3-202ENST00000503427 BICDL2A1A5D9 508 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 CPA1P15085 419 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 KBTBD3Q8NAB2 608 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 RBM28Q9NW13 759 aaKnown RBP18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 SNX14Q9Y5W7 946 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 SGSM2O43147 1006 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 SYT10Q6XYQ8 523 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 RRP36Q96EU6 259 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms