RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 ANGEL2Q5VTE6 544 aaKnown RBP21.73■■□□□ 1.07
SMAD1-204ENST00000503324 ZGPATQ8N5A5 531 aaKnown RBP21.73■■□□□ 1.07
SMAD1-204ENST00000503324 PRMT6Q96LA8 375 aaPredicted RBP21.73■■□□□ 1.07
SMAD1-204ENST00000503324 MRIQ9BWK5 157 aa21.73■■□□□ 1.07
SMAD1-204ENST00000503324 GLIS2Q9BZE0 524 aaPredicted RBP21.73■■□□□ 1.07
SMAD1-204ENST00000503324 SNRKQ9NRH2 765 aa21.73■■□□□ 1.07
SMAD1-204ENST00000503324 LDHBP07195 334 aaKnown RBP21.72■■□□□ 1.07
SMAD1-204ENST00000503324 TBC1D9Q6ZT07 1266 aa21.72■■□□□ 1.07
SMAD1-204ENST00000503324 BCL11AQ9H165 835 aa21.72■■□□□ 1.07
SMAD1-204ENST00000503324 MAST3O60307 1309 aa21.72■■□□□ 1.07
SMAD1-204ENST00000503324 PITPNM2Q9BZ72 1349 aa21.72■■□□□ 1.07
SMAD1-204ENST00000503324 TRAF5O00463 557 aa21.71■■□□□ 1.07
SMAD1-204ENST00000503324 IGHDP01880 384 aa21.71■■□□□ 1.07
SMAD1-204ENST00000503324 HSPA6P17066 643 aa21.71■■□□□ 1.07
SMAD1-204ENST00000503324 FMR1Q06787 632 aaKnown RBP eCLIP21.71■■□□□ 1.07
SMAD1-204ENST00000503324 CDC37L1Q7L3B6 337 aa21.71■■□□□ 1.07
SMAD1-204ENST00000503324 DCPSQ96C86 337 aaKnown RBP21.71■■□□□ 1.07
SMAD1-204ENST00000503324 GCC1Q96CN9 775 aa21.71■■□□□ 1.07
SMAD1-204ENST00000503324 ABCF2Q9UG63 623 aa21.71■■□□□ 1.07
SMAD1-204ENST00000503324 CYP2E1P05181 493 aaPredicted RBP21.7■■□□□ 1.06
SMAD1-204ENST00000503324 ZAP70P43403 619 aa21.7■■□□□ 1.06
SMAD1-204ENST00000503324 RBM5P52756 815 aaKnown RBP eCLIP21.7■■□□□ 1.06
SMAD1-204ENST00000503324 HHIPL2Q6UWX4 724 aa21.7■■□□□ 1.06
SMAD1-204ENST00000503324 DLK2Q6UY11 383 aa21.7■■□□□ 1.06
SMAD1-204ENST00000503324 KRT26Q7Z3Y9 468 aa21.7■■□□□ 1.06
SMAD1-204ENST00000503324 USP48Q86UV5 1035 aa21.7■■□□□ 1.06
SMAD1-204ENST00000503324 TEKT1Q969V4 418 aa21.7■■□□□ 1.06
SMAD1-204ENST00000503324 RWDD1Q9H446 243 aaPredicted RBP21.7■■□□□ 1.06
SMAD1-204ENST00000503324 POLR2AP24928 1970 aaKnown RBP21.7■■□□□ 1.06
SMAD1-204ENST00000503324 ECM29Q5VYK3 1845 aa21.69■■□□□ 1.06
SMAD1-204ENST00000503324 ADM5C9JUS6 153 aa21.69■■□□□ 1.06
SMAD1-204ENST00000503324 DIXDC1Q155Q3 683 aa21.69■■□□□ 1.06
SMAD1-204ENST00000503324 SPTY2D1Q68D10 685 aaPredicted RBP21.69■■□□□ 1.06
SMAD1-204ENST00000503324 SMC5Q8IY18 1101 aa21.69■■□□□ 1.06
SMAD1-204ENST00000503324 ZNF384Q8TF68 577 aa21.69■■□□□ 1.06
SMAD1-204ENST00000503324 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.69■■□□□ 1.06
SMAD1-204ENST00000503324 ZDHHC15Q96MV8 337 aa21.69■■□□□ 1.06
SMAD1-204ENST00000503324 APLP1P51693 650 aa21.68■■□□□ 1.06
SMAD1-204ENST00000503324 APOBEC3HQ6NTF7 200 aaKnown RBP21.68■■□□□ 1.06
SMAD1-204ENST00000503324 ERICH6Q7L0X2 663 aa21.68■■□□□ 1.06
SMAD1-204ENST00000503324 SCAF8Q9UPN6 1271 aaKnown RBP21.68■■□□□ 1.06
SMAD1-204ENST00000503324 DAGLAQ9Y4D2 1042 aa21.68■■□□□ 1.06
SMAD1-204ENST00000503324 NDUFB9Q9Y6M9 179 aa21.68■■□□□ 1.06
SMAD1-204ENST00000503324 CLRN2A0PK11 232 aa21.67■■□□□ 1.06
SMAD1-204ENST00000503324 SPDYE2Q495Y8 402 aa21.67■■□□□ 1.06
SMAD1-204ENST00000503324 SULF1Q8IWU6 871 aa21.67■■□□□ 1.06
SMAD1-204ENST00000503324 TDRD3Q9H7E2 651 aaKnown RBP21.67■■□□□ 1.06
SMAD1-204ENST00000503324 PIH1D3Q9NQM4 214 aaKnown RBP21.67■■□□□ 1.06
SMAD1-204ENST00000503324 GAKO14976 1311 aa21.66■■□□□ 1.06
SMAD1-204ENST00000503324 ATP5JP18859 108 aa21.66■■□□□ 1.06
SMAD1-204ENST00000503324 MECOMQ03112 1051 aa21.66■■□□□ 1.06
SMAD1-204ENST00000503324 DZIP1Q86YF9 867 aaKnown RBP21.66■■□□□ 1.06
SMAD1-204ENST00000503324 NSUN4Q96CB9 384 aaKnown RBP21.66■■□□□ 1.06
SMAD1-204ENST00000503324 ZNF70Q9UC06 446 aaPredicted RBP21.66■■□□□ 1.06
SMAD1-204ENST00000503324 MYO1BO43795 1136 aa21.65■■□□□ 1.06
SMAD1-204ENST00000503324 ANKRD45Q5TZF3 282 aa21.65■■□□□ 1.06
SMAD1-204ENST00000503324 APOBEC3FQ8IUX4 373 aaKnown RBP21.65■■□□□ 1.06
SMAD1-204ENST00000503324 FAM163AQ96GL9 167 aaPredicted RBP21.65■■□□□ 1.06
SMAD1-204ENST00000503324 ANTXR1Q9H6X2 564 aa21.65■■□□□ 1.06
SMAD1-204ENST00000503324 CST9Q5W186 159 aa21.64■■□□□ 1.05
SMAD1-204ENST00000503324 OTUD7AQ8TE49 926 aaPredicted RBP21.64■■□□□ 1.05
SMAD1-204ENST00000503324 ECHDC1Q9NTX5 307 aa21.64■■□□□ 1.05
SMAD1-204ENST00000503324 RAI14Q9P0K7 980 aa21.64■■□□□ 1.05
SMAD1-204ENST00000503324 LRP2BPQ9P2M1 347 aa21.64■■□□□ 1.05
SMAD1-204ENST00000503324 MYO5AQ9Y4I1 1855 aaKnown RBP21.64■■□□□ 1.05
SMAD1-204ENST00000503324 MAST2Q6P0Q8 1798 aa21.64■■□□□ 1.05
SMAD1-204ENST00000503324 MYH2Q9UKX2 1941 aa21.63■■□□□ 1.05
SMAD1-204ENST00000503324 SALL3Q9BXA9 1300 aa21.63■■□□□ 1.05
SMAD1-204ENST00000503324 TRPM7Q96QT4 1865 aa21.63■■□□□ 1.05
SMAD1-204ENST00000503324 CENPBP07199 599 aaPredicted RBP21.63■■□□□ 1.05
SMAD1-204ENST00000503324 CDCA5Q96FF9 252 aa21.63■■□□□ 1.05
SMAD1-204ENST00000503324 BOLA2Q9H3K6 86 aa21.63■■□□□ 1.05
SMAD1-204ENST00000503324 VEZTQ9HBM0 779 aa21.63■■□□□ 1.05
SMAD1-204ENST00000503324 DOCK2Q92608 1830 aa21.62■■□□□ 1.05
SMAD1-204ENST00000503324 MROH7-TTC4A0A0A0MT08 1334 aa21.62■■□□□ 1.05
SMAD1-204ENST00000503324 HTRA3P83110 453 aa21.62■■□□□ 1.05
SMAD1-204ENST00000503324 TSHZ3Q63HK5 1081 aa21.62■■□□□ 1.05
SMAD1-204ENST00000503324 HAUS7Q99871 368 aa21.62■■□□□ 1.05
SMAD1-204ENST00000503324 TMEM88BA6NKF7 163 aa21.61■■□□□ 1.05
SMAD1-204ENST00000503324 IGSF3O75054 1194 aa21.61■■□□□ 1.05
SMAD1-204ENST00000503324 CELF2O95319 508 aaKnown RBP21.61■■□□□ 1.05
SMAD1-204ENST00000503324 PRAMEF18Q5VWM3 479 aa21.61■■□□□ 1.05
SMAD1-204ENST00000503324 CDC42EP5Q6NZY7 148 aa21.61■■□□□ 1.05
SMAD1-204ENST00000503324 SLF2Q8IX21 1173 aa21.61■■□□□ 1.05
SMAD1-204ENST00000503324 EDC3Q96F86 508 aaKnown RBP21.61■■□□□ 1.05
SMAD1-204ENST00000503324 DNAJC2Q99543 621 aaKnown RBP21.61■■□□□ 1.05
SMAD1-204ENST00000503324 DEFB129Q9H1M3 183 aa21.61■■□□□ 1.05
SMAD1-204ENST00000503324 CREBZFQ9NS37 354 aa21.61■■□□□ 1.05
SMAD1-204ENST00000503324 GPR75-ASB3A0A0A6YYF3 556 aa21.6■■□□□ 1.05
SMAD1-204ENST00000503324 GOLIM4O00461 696 aa21.6■■□□□ 1.05
SMAD1-204ENST00000503324 CACNB3P54284 484 aa21.6■■□□□ 1.05
SMAD1-204ENST00000503324 GSTO1P78417 241 aa21.6■■□□□ 1.05
SMAD1-204ENST00000503324 NUCB1Q02818 461 aa21.6■■□□□ 1.05
SMAD1-204ENST00000503324 B4GALNT3Q6L9W6 998 aa21.6■■□□□ 1.05
SMAD1-204ENST00000503324 GPATCH3Q96I76 525 aa21.6■■□□□ 1.05
SMAD1-204ENST00000503324 TTC41PQ6P2S7 1318 aa21.59■■□□□ 1.05
SMAD1-204ENST00000503324 IDH1O75874 414 aaKnown RBP21.59■■□□□ 1.05
SMAD1-204ENST00000503324 BTDP43251 543 aa21.59■■□□□ 1.05
SMAD1-204ENST00000503324 TTF1Q15361 905 aaPredicted RBP21.59■■□□□ 1.05
SMAD1-204ENST00000503324 NAA16Q6N069 864 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms