RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 COL4A1P02462 1669 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 MYO5AQ9Y4I1 1855 aaKnown RBP13.62□□□□□ -0.23
USP46-204ENST00000503060 TCRBV5S4A2TA0A5A2 114 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 DNM1Q05193 864 aaKnown RBP13.62□□□□□ -0.23
USP46-204ENST00000503060 BICDL1Q6ZP65 573 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 CDC37L1Q7L3B6 337 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 LLPHQ9BRT6 129 aaKnown RBP13.62□□□□□ -0.23
USP46-204ENST00000503060 FIBPO43427 364 aa13.61□□□□□ -0.23
USP46-204ENST00000503060 CSPP1Q1MSJ5 1256 aa13.61□□□□□ -0.23
USP46-204ENST00000503060 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
USP46-204ENST00000503060 FAM182BQ5T319 152 aa13.61□□□□□ -0.23
USP46-204ENST00000503060 FBXL16Q8N461 479 aa13.61□□□□□ -0.23
USP46-204ENST00000503060 SMARCC2Q8TAQ2 1214 aa13.61□□□□□ -0.23
USP46-204ENST00000503060 ANP32BQ92688 251 aaKnown RBP13.61□□□□□ -0.23
USP46-204ENST00000503060 SYAP1Q96A49 352 aaPredicted RBP13.61□□□□□ -0.23
USP46-204ENST00000503060 CCNL1Q9UK58 526 aaPredicted RBP13.61□□□□□ -0.23
USP46-204ENST00000503060 GNPATO15228 680 aa13.61□□□□□ -0.23
USP46-204ENST00000503060 BCAMP50895 628 aa13.61□□□□□ -0.23
USP46-204ENST00000503060 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
USP46-204ENST00000503060 CHST3Q7LGC8 479 aa13.61□□□□□ -0.23
USP46-204ENST00000503060 ANKRD18AQ8IVF6 992 aa13.61□□□□□ -0.23
USP46-204ENST00000503060 GJD4Q96KN9 370 aaPredicted RBP13.61□□□□□ -0.23
USP46-204ENST00000503060 SRP68Q9UHB9 627 aaKnown RBP13.61□□□□□ -0.23
USP46-204ENST00000503060 DOCK2Q92608 1830 aa13.6□□□□□ -0.23
USP46-204ENST00000503060 TTC36A6NLP5 189 aa13.6□□□□□ -0.23
USP46-204ENST00000503060 ZNF213O14771 459 aa13.6□□□□□ -0.23
USP46-204ENST00000503060 UBE2HP62256 183 aa13.6□□□□□ -0.23
USP46-204ENST00000503060 MAP3K12Q12852 859 aa13.6□□□□□ -0.23
USP46-204ENST00000503060 NBPF11Q86T75 865 aa13.6□□□□□ -0.23
USP46-204ENST00000503060 MB21D2Q8IYB1 491 aaPredicted RBP13.6□□□□□ -0.23
USP46-204ENST00000503060 ZNF274Q96GC6 653 aaPredicted RBP13.6□□□□□ -0.23
USP46-204ENST00000503060 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
USP46-204ENST00000503060 SYCE3A1L190 88 aa13.6□□□□□ -0.23
USP46-204ENST00000503060 LRSAM1Q6UWE0 723 aa13.6□□□□□ -0.23
USP46-204ENST00000503060 FERMT3Q86UX7 667 aa13.6□□□□□ -0.23
USP46-204ENST00000503060 IRX3P78415 501 aaPredicted RBP13.59□□□□□ -0.23
USP46-204ENST00000503060 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
USP46-204ENST00000503060 NCOA7Q8NI08 942 aa13.59□□□□□ -0.23
USP46-204ENST00000503060 NYXQ9GZU5 481 aa13.59□□□□□ -0.23
USP46-204ENST00000503060 BSDC1Q9NW68 430 aaPredicted RBP13.59□□□□□ -0.23
USP46-204ENST00000503060 ZPR1O75312 459 aa13.59□□□□□ -0.23
USP46-204ENST00000503060 PDIA3P30101 505 aaKnown RBP13.59□□□□□ -0.23
USP46-204ENST00000503060 MCM5P33992 734 aa13.59□□□□□ -0.23
USP46-204ENST00000503060 EVCP57679 992 aa13.59□□□□□ -0.23
USP46-204ENST00000503060 TSHZ1Q6ZSZ6 1077 aa13.59□□□□□ -0.23
USP46-204ENST00000503060 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
USP46-204ENST00000503060 MAGEB6Q8N7X4 407 aa13.59□□□□□ -0.23
USP46-204ENST00000503060 DDX11Q96FC9 970 aa13.59□□□□□ -0.23
USP46-204ENST00000503060 STRBPQ96SI9 672 aaKnown RBP13.59□□□□□ -0.23
USP46-204ENST00000503060 SETDB2Q96T68 719 aa13.59□□□□□ -0.23
USP46-204ENST00000503060 RTCBQ9Y3I0 505 aaKnown RBP13.59□□□□□ -0.23
USP46-204ENST00000503060 CASZ1Q86V15 1759 aa13.58□□□□□ -0.23
USP46-204ENST00000503060 COL24A1Q17RW2 1714 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 PRC1O43663 620 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 CTDNEP1O95476 244 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 NASPP49321 788 aaPredicted RBP13.58□□□□□ -0.24
USP46-204ENST00000503060 HMGN5P82970 282 aaKnown RBP13.58□□□□□ -0.24
USP46-204ENST00000503060 RINLQ6ZS11 566 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 RALYLQ86SE5 291 aaKnown RBP13.58□□□□□ -0.24
USP46-204ENST00000503060 FAM184AQ8NB25 1140 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 AIDAQ96BJ3 306 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 AFF2P51816 1311 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 WDR19Q8NEZ3 1342 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 LY75O60449 1722 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 A0A1B0GUL6 1792 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 APPP05067 770 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 ANTXR2P58335 489 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 CCT2P78371 535 aaKnown RBP13.58□□□□□ -0.24
USP46-204ENST00000503060 KRT85P78386 507 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 UBE4AQ14139 1066 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 ALX1Q15699 326 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 CHMP4CQ96CF2 233 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 RBSNQ9H1K0 784 aa13.58□□□□□ -0.24
USP46-204ENST00000503060 GPHNQ9NQX3 736 aaPredicted RBP13.58□□□□□ -0.24
USP46-204ENST00000503060 PTPDC1A2A3K4 754 aa13.57□□□□□ -0.24
USP46-204ENST00000503060 NBPF20Q3BBV1 942 aa13.57□□□□□ -0.24
USP46-204ENST00000503060 NBPF5PQ86XG9 351 aaPredicted RBP13.57□□□□□ -0.24
USP46-204ENST00000503060 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
USP46-204ENST00000503060 ZNF804BA4D1E1 1349 aa13.57□□□□□ -0.24
USP46-204ENST00000503060 ONECUT3O60422 494 aaPredicted RBP13.56□□□□□ -0.24
USP46-204ENST00000503060 MBD4O95243 580 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 FAM173BQ6P4H8 233 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 AMIGO3Q86WK7 504 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 TBC1D10CQ8IV04 446 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 CELF1Q92879 486 aaKnown RBP13.56□□□□□ -0.24
USP46-204ENST00000503060 ARHGEF1Q92888 912 aaKnown RBP13.56□□□□□ -0.24
USP46-204ENST00000503060 NCOA5Q9HCD5 579 aaKnown RBP13.56□□□□□ -0.24
USP46-204ENST00000503060 MINPP1Q9UNW1 487 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 SH3BP1Q9Y3L3 701 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 KIF3AQ9Y496 699 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 ZMYM6O95789 1325 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 TAF1LQ8IZX4 1826 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 H3BQV1 296 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 HSPA1LP34931 641 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 RESTQ13127 1097 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 ANKRD13AQ8IZ07 590 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 NLRP3Q96P20 1036 aa13.56□□□□□ -0.24
USP46-204ENST00000503060 SALL1Q9NSC2 1324 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms