RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 TXNRD3Q86VQ6 643 aa6.52□□□□□ -1.37
HTT-202ENST00000502820 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.52□□□□□ -1.37
HTT-202ENST00000502820 SLAIN1Q8ND83 568 aa6.52□□□□□ -1.37
HTT-202ENST00000502820 ZKSCAN4Q969J2 545 aaPredicted RBP6.52□□□□□ -1.37
HTT-202ENST00000502820 PRMT6Q96LA8 375 aaPredicted RBP6.52□□□□□ -1.37
HTT-202ENST00000502820 CDX2Q99626 313 aaPredicted RBP6.52□□□□□ -1.37
HTT-202ENST00000502820 TDRD3Q9H7E2 651 aaKnown RBP6.52□□□□□ -1.37
HTT-202ENST00000502820 PRKRIP1Q9H875 184 aaPredicted RBP6.52□□□□□ -1.37
HTT-202ENST00000502820 CHPF2Q9P2E5 772 aa6.52□□□□□ -1.37
HTT-202ENST00000502820 PPP2R3BQ9Y5P8 575 aa6.52□□□□□ -1.37
HTT-202ENST00000502820 LAMA3Q16787 3333 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 IRF6O14896 467 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 HSP90B1P14625 803 aaKnown RBP6.51□□□□□ -1.37
HTT-202ENST00000502820 FOSL2P15408 326 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 KLRK1P26718 216 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 TMPOP42166 694 aaKnown RBP6.51□□□□□ -1.37
HTT-202ENST00000502820 FLT3LGP49771 235 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.51□□□□□ -1.37
HTT-202ENST00000502820 CDAN1Q8IWY9 1227 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 IL27Q8NEV9 243 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 HELBQ8NG08 1087 aaPredicted RBP6.51□□□□□ -1.37
HTT-202ENST00000502820 PLBD2Q8NHP8 589 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 WRNIP1Q96S55 665 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 CDC5LQ99459 802 aaKnown RBP6.51□□□□□ -1.37
HTT-202ENST00000502820 MYD88Q99836 296 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 LBHD1Q9BQE6 289 aaPredicted RBP6.51□□□□□ -1.37
HTT-202ENST00000502820 TMEM39BQ9GZU3 492 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 C11orf49Q9H6J7 331 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 BABAM1Q9NWV8 329 aa6.51□□□□□ -1.37
HTT-202ENST00000502820 KIAA0100Q14667 2235 aaKnown RBP6.51□□□□□ -1.37
HTT-202ENST00000502820 ZNF804BA4D1E1 1349 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 AOX1Q06278 1338 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 VCANP13611 3396 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 KDM3BQ7LBC6 1761 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 SSC5DA1L4H1 1573 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 TNPO2O14787 897 aaKnown RBP6.5□□□□□ -1.37
HTT-202ENST00000502820 PLIN1O60240 522 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 PDE8AO60658 829 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 CYP2C8P10632 490 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 RIPK4P57078 832 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 TNFAIP1Q13829 316 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 KRT24Q2M2I5 525 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 C17orf99Q6UX52 265 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 LRP10Q7Z4F1 713 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 ZBTB38Q8NAP3 1195 aaPredicted RBP6.5□□□□□ -1.37
HTT-202ENST00000502820 NBPF3Q9H094 633 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 MINPP1Q9UNW1 487 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 TRIM35Q9UPQ4 493 aa6.5□□□□□ -1.37
HTT-202ENST00000502820 MED23Q9ULK4 1368 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 SPDYE2BA6NHP3 402 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 UNCXA6NJT0 531 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 SPDYE6P0CI01 402 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 IGHMBP2P38935 993 aaKnown RBP6.49□□□□□ -1.37
HTT-202ENST00000502820 TNNI2P48788 182 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 CACNB3P54284 484 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 GOLGA2Q08379 1002 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 LMOD3Q0VAK6 560 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 NEUROD2Q15784 382 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 TJAP1Q5JTD0 557 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 HDGFL1Q5TGJ6 251 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 MIGA2Q7L4E1 593 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 CERS5Q8N5B7 392 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 RUNDC1Q96C34 613 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 ISCA1Q9BUE6 129 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 ZNF70Q9UC06 446 aaPredicted RBP6.49□□□□□ -1.37
HTT-202ENST00000502820 ADAMTS8Q9UP79 889 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 SALL2Q9Y467 1007 aaPredicted RBP6.49□□□□□ -1.37
HTT-202ENST00000502820 COL4A1P02462 1669 aa6.49□□□□□ -1.37
HTT-202ENST00000502820 SPDYE5A6NIY4 337 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 POTEB2H3BUK9 544 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 SNAP23O00161 211 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 CHL1O00533 1208 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 NBR1Q14596 966 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 GSE1Q14687 1217 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 WDR43Q15061 677 aaKnown RBP eCLIP6.48□□□□□ -1.37
HTT-202ENST00000502820 GADL1Q6ZQY3 521 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 ERO1BQ86YB8 467 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 CCDC146Q8IYE0 955 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 SMCR8Q8TEV9 937 aaPredicted RBP6.48□□□□□ -1.37
HTT-202ENST00000502820 MPHOSPH8Q99549 860 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.48□□□□□ -1.37
HTT-202ENST00000502820 SEMA6BQ9H3T3 888 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 GREM2Q9H772 168 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 CD209Q9NNX6 404 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 PRKAG2Q9UGJ0 569 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 LAMB4A4D0S4 1761 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 NUP98P52948 1817 aa6.48□□□□□ -1.37
HTT-202ENST00000502820 TAF1P21675 1872 aa6.47□□□□□ -1.37
HTT-202ENST00000502820 RBBP6Q7Z6E9 1792 aaKnown RBP6.47□□□□□ -1.37
HTT-202ENST00000502820 DLG5Q8TDM6 1919 aa6.47□□□□□ -1.37
HTT-202ENST00000502820 TAF5LO75529 589 aa6.47□□□□□ -1.37
HTT-202ENST00000502820 MYCNP04198 464 aaPredicted RBP6.47□□□□□ -1.37
HTT-202ENST00000502820 MMP14P50281 582 aa6.47□□□□□ -1.37
HTT-202ENST00000502820 ALYREFQ86V81 257 aaKnown RBP6.47□□□□□ -1.37
HTT-202ENST00000502820 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.47□□□□□ -1.37
HTT-202ENST00000502820 COA7Q96BR5 231 aa6.47□□□□□ -1.37
HTT-202ENST00000502820 ZBED3Q96IU2 234 aaPredicted RBP6.47□□□□□ -1.37
HTT-202ENST00000502820 PARK7Q99497 189 aaKnown RBP6.47□□□□□ -1.37
HTT-202ENST00000502820 HMX1Q9NP08 348 aaPredicted RBP6.47□□□□□ -1.37
HTT-202ENST00000502820 BSDC1Q9NW68 430 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms