RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 TFE3P19532 575 aaPredicted RBP10.05□□□□□ -0.8
NEDD4-203ENST00000502612 SNRPNP63162 240 aaKnown RBP10.05□□□□□ -0.8
NEDD4-203ENST00000502612 PPP2R3AQ06190 1150 aa10.05□□□□□ -0.8
NEDD4-203ENST00000502612 ILDR2Q71H61 639 aa10.05□□□□□ -0.8
NEDD4-203ENST00000502612 CACTIN-AS1Q8N1I8 211 aa10.05□□□□□ -0.8
NEDD4-203ENST00000502612 NEDD1Q8NHV4 660 aa10.05□□□□□ -0.8
NEDD4-203ENST00000502612 RHOVQ96L33 236 aa10.05□□□□□ -0.8
NEDD4-203ENST00000502612 PCDHB5Q9Y5E4 795 aa10.05□□□□□ -0.8
NEDD4-203ENST00000502612 TM4SF5O14894 197 aa10.04□□□□□ -0.8
NEDD4-203ENST00000502612 PF4P02776 101 aa10.04□□□□□ -0.8
NEDD4-203ENST00000502612 SETDB1Q15047 1291 aa10.04□□□□□ -0.8
NEDD4-203ENST00000502612 MPRIPQ6WCQ1 1025 aa10.04□□□□□ -0.8
NEDD4-203ENST00000502612 GALNT11Q8NCW6 608 aa10.04□□□□□ -0.8
NEDD4-203ENST00000502612 KLHDC7BQ96G42 594 aa10.04□□□□□ -0.8
NEDD4-203ENST00000502612 DDX3YO15523 660 aaKnown RBP10.03□□□□□ -0.8
NEDD4-203ENST00000502612 IGSF3O75054 1194 aa10.03□□□□□ -0.8
NEDD4-203ENST00000502612 ARHGEF15O94989 841 aa10.03□□□□□ -0.8
NEDD4-203ENST00000502612 GARTP22102 1010 aa10.03□□□□□ -0.8
NEDD4-203ENST00000502612 NME2P22392 152 aa10.03□□□□□ -0.8
NEDD4-203ENST00000502612 PIP4K2BP78356 416 aa10.03□□□□□ -0.8
NEDD4-203ENST00000502612 PAK2Q13177 524 aa10.03□□□□□ -0.8
NEDD4-203ENST00000502612 AGMOQ6ZNB7 445 aa10.03□□□□□ -0.8
NEDD4-203ENST00000502612 TRIM11Q96F44 468 aa10.03□□□□□ -0.8
NEDD4-203ENST00000502612 ZC3H12CQ9C0D7 883 aaKnown RBP10.03□□□□□ -0.8
NEDD4-203ENST00000502612 NRSN2Q9GZP1 204 aa10.03□□□□□ -0.8
NEDD4-203ENST00000502612 DEAF1O75398 565 aaPredicted RBP10.02□□□□□ -0.81
NEDD4-203ENST00000502612 CTSBP07858 339 aa10.02□□□□□ -0.81
NEDD4-203ENST00000502612 LORP23490 312 aaPredicted RBP10.02□□□□□ -0.81
NEDD4-203ENST00000502612 EIF4A3P38919 411 aaKnown RBP10.02□□□□□ -0.81
NEDD4-203ENST00000502612 C19orf57Q0VDD7 668 aa10.02□□□□□ -0.81
NEDD4-203ENST00000502612 SEPT6Q14141 434 aa10.02□□□□□ -0.81
NEDD4-203ENST00000502612 FBXL19Q6PCT2 694 aa10.02□□□□□ -0.81
NEDD4-203ENST00000502612 PDZD3Q86UT5 571 aa10.02□□□□□ -0.81
NEDD4-203ENST00000502612 CBX8Q9HC52 389 aa10.02□□□□□ -0.81
NEDD4-203ENST00000502612 INPP5FQ9Y2H2 1132 aa10.02□□□□□ -0.81
NEDD4-203ENST00000502612 ADAM11O75078 769 aa10.01□□□□□ -0.81
NEDD4-203ENST00000502612 ARNTP27540 789 aa10.01□□□□□ -0.81
NEDD4-203ENST00000502612 CAMK2GQ13555 558 aaPredicted RBP10.01□□□□□ -0.81
NEDD4-203ENST00000502612 PWP1Q13610 501 aa10.01□□□□□ -0.81
NEDD4-203ENST00000502612 FAM117BQ6P1L5 589 aa10.01□□□□□ -0.81
NEDD4-203ENST00000502612 SPON2Q9BUD6 331 aa10.01□□□□□ -0.81
NEDD4-203ENST00000502612 KCNK4Q9NYG8 393 aa10.01□□□□□ -0.81
NEDD4-203ENST00000502612 RLBP1P12271 317 aa10□□□□□ -0.81
NEDD4-203ENST00000502612 NLRP12P59046 1061 aa10□□□□□ -0.81
NEDD4-203ENST00000502612 FOXD4L6Q3SYB3 417 aaPredicted RBP10□□□□□ -0.81
NEDD4-203ENST00000502612 TRAPPC3LQ5T215 181 aa10□□□□□ -0.81
NEDD4-203ENST00000502612 FOXD4L3Q6VB84 417 aaPredicted RBP10□□□□□ -0.81
NEDD4-203ENST00000502612 LINC00114Q6XXX2 140 aa10□□□□□ -0.81
NEDD4-203ENST00000502612 KIAA0825Q8IV33 1275 aa10□□□□□ -0.81
NEDD4-203ENST00000502612 ZNF296Q8WUU4 475 aaPredicted RBP10□□□□□ -0.81
NEDD4-203ENST00000502612 SOX17Q9H6I2 414 aaPredicted RBP10□□□□□ -0.81
NEDD4-203ENST00000502612 FAM229AH3BQW9 127 aa9.99□□□□□ -0.81
NEDD4-203ENST00000502612 RPS26P62854 115 aaKnown RBP9.99□□□□□ -0.81
NEDD4-203ENST00000502612 LMNB2Q03252 620 aa9.99□□□□□ -0.81
NEDD4-203ENST00000502612 PTPN11Q06124 597 aaPredicted RBP9.99□□□□□ -0.81
NEDD4-203ENST00000502612 ZNF252P-AS1Q0IIN9 211 aa9.99□□□□□ -0.81
NEDD4-203ENST00000502612 SNAP47Q5SQN1 464 aa9.99□□□□□ -0.81
NEDD4-203ENST00000502612 BNC2Q6ZN30 1099 aaPredicted RBP9.99□□□□□ -0.81
NEDD4-203ENST00000502612 GOLM1Q8NBJ4 401 aa9.99□□□□□ -0.81
NEDD4-203ENST00000502612 WNT8BQ93098 351 aa9.99□□□□□ -0.81
NEDD4-203ENST00000502612 GAL3ST3Q96A11 431 aa9.99□□□□□ -0.81
NEDD4-203ENST00000502612 EAF1Q96JC9 268 aaPredicted RBP9.99□□□□□ -0.81
NEDD4-203ENST00000502612 OSGEPQ9NPF4 335 aa9.99□□□□□ -0.81
NEDD4-203ENST00000502612 WIPF1O43516 503 aa9.98□□□□□ -0.81
NEDD4-203ENST00000502612 GSTP1P09211 210 aaKnown RBP9.98□□□□□ -0.81
NEDD4-203ENST00000502612 MAOBP27338 520 aa9.98□□□□□ -0.81
NEDD4-203ENST00000502612 ARL4DP49703 201 aa9.98□□□□□ -0.81
NEDD4-203ENST00000502612 AP3B2Q13367 1082 aa9.98□□□□□ -0.81
NEDD4-203ENST00000502612 MAP1SQ66K74 1059 aaPredicted RBP9.98□□□□□ -0.81
NEDD4-203ENST00000502612 LLGL2Q6P1M3 1020 aa9.98□□□□□ -0.81
NEDD4-203ENST00000502612 USP26Q9BXU7 913 aa9.98□□□□□ -0.81
NEDD4-203ENST00000502612 ENAMQ9NRM1 1142 aa9.98□□□□□ -0.81
NEDD4-203ENST00000502612 A0A0A0MRY4 1105 aa9.97□□□□□ -0.81
NEDD4-203ENST00000502612 F13A1P00488 732 aa9.97□□□□□ -0.81
NEDD4-203ENST00000502612 CRKP46108 304 aa9.97□□□□□ -0.81
NEDD4-203ENST00000502612 POU4F3Q15319 338 aa9.97□□□□□ -0.81
NEDD4-203ENST00000502612 FBXO27Q8NI29 283 aa9.97□□□□□ -0.81
NEDD4-203ENST00000502612 JARID2Q92833 1246 aaPredicted RBP9.97□□□□□ -0.81
NEDD4-203ENST00000502612 KCNB2Q92953 911 aa9.97□□□□□ -0.81
NEDD4-203ENST00000502612 KCNQ5Q9NR82 932 aa9.97□□□□□ -0.81
NEDD4-203ENST00000502612 UBP1Q9NZI7 540 aa9.97□□□□□ -0.81
NEDD4-203ENST00000502612 USP35Q9P2H5 1018 aa9.97□□□□□ -0.81
NEDD4-203ENST00000502612 SAMM50Q9Y512 469 aa9.97□□□□□ -0.81
NEDD4-203ENST00000502612 GREM1O60565 184 aa9.96□□□□□ -0.82
NEDD4-203ENST00000502612 DLGAP3O95886 979 aa9.96□□□□□ -0.82
NEDD4-203ENST00000502612 GJA8P48165 433 aa9.96□□□□□ -0.82
NEDD4-203ENST00000502612 SUZ12Q15022 739 aaKnown RBP9.96□□□□□ -0.82
NEDD4-203ENST00000502612 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.96□□□□□ -0.82
NEDD4-203ENST00000502612 TRIM42Q8IWZ5 723 aa9.96□□□□□ -0.82
NEDD4-203ENST00000502612 DDX54Q8TDD1 881 aaKnown RBP9.96□□□□□ -0.82
NEDD4-203ENST00000502612 UBASH3BQ8TF42 649 aa9.96□□□□□ -0.82
NEDD4-203ENST00000502612 GPRASP2Q96D09 838 aa9.96□□□□□ -0.82
NEDD4-203ENST00000502612 PLVAPQ9BX97 442 aa9.96□□□□□ -0.82
NEDD4-203ENST00000502612 CCDC86Q9H6F5 360 aaKnown RBP9.96□□□□□ -0.82
NEDD4-203ENST00000502612 CYP8B1Q9UNU6 501 aa9.96□□□□□ -0.82
NEDD4-203ENST00000502612 TLR3O15455 904 aaKnown RBP9.95□□□□□ -0.82
NEDD4-203ENST00000502612 SELPP16109 830 aa9.95□□□□□ -0.82
NEDD4-203ENST00000502612 DNAJA1P31689 397 aaKnown RBP9.95□□□□□ -0.82
NEDD4-203ENST00000502612 CD68P34810 354 aaPredicted RBP9.95□□□□□ -0.82
NEDD4-203ENST00000502612 CDK8P49336 464 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms