RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 GTF2A2P52657 109 aa9.01□□□□□ -0.97
SH3RF1-202ENST00000502315 PRMT2P55345 433 aa9.01□□□□□ -0.97
SH3RF1-202ENST00000502315 NBPF11Q86T75 865 aa9.01□□□□□ -0.97
SH3RF1-202ENST00000502315 HELBQ8NG08 1087 aaPredicted RBP9.01□□□□□ -0.97
SH3RF1-202ENST00000502315 CHMP3Q9Y3E7 222 aa9.01□□□□□ -0.97
SH3RF1-202ENST00000502315 PDE8BO95263 885 aa9□□□□□ -0.97
SH3RF1-202ENST00000502315 RBM5P52756 815 aaKnown RBP eCLIP9□□□□□ -0.97
SH3RF1-202ENST00000502315 SOX10P56693 466 aa9□□□□□ -0.97
SH3RF1-202ENST00000502315 MAP3K9P80192 1104 aa9□□□□□ -0.97
SH3RF1-202ENST00000502315 SP3Q02447 781 aa9□□□□□ -0.97
SH3RF1-202ENST00000502315 NBPF12Q5TAG4 269 aaPredicted RBP9□□□□□ -0.97
SH3RF1-202ENST00000502315 HHIPL2Q6UWX4 724 aa9□□□□□ -0.97
SH3RF1-202ENST00000502315 OTOP1Q7RTM1 612 aa9□□□□□ -0.97
SH3RF1-202ENST00000502315 VPS37DQ86XT2 251 aa9□□□□□ -0.97
SH3RF1-202ENST00000502315 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
SH3RF1-202ENST00000502315 ARMC5Q96C12 935 aa9□□□□□ -0.97
SH3RF1-202ENST00000502315 ZDHHC15Q96MV8 337 aa9□□□□□ -0.97
SH3RF1-202ENST00000502315 ZNF70Q9UC06 446 aaPredicted RBP9□□□□□ -0.97
SH3RF1-202ENST00000502315 TTF2Q9UNY4 1162 aaKnown RBP9□□□□□ -0.97
SH3RF1-202ENST00000502315 F6X3S4 739 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 CT47B1P0C2W7 299 aaPredicted RBP8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 CRKP46108 304 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 CCDC184Q52MB2 194 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 WDR66Q8TBY9 1149 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 TEKT1Q969V4 418 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 MS4A4AQ96JQ5 239 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 VEZTQ9HBM0 779 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 ZFYVE28Q9HCC9 887 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 TMOD2Q9NZR1 351 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 PTPN22Q9Y2R2 807 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 TRIM17Q9Y577 477 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 CSADQ9Y600 493 aa8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 RPAP1Q9BWH6 1393 aaPredicted RBP8.99□□□□□ -0.97
SH3RF1-202ENST00000502315 PDE4DIPQ5VU43 2346 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 CLRN2A0PK11 232 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 E9PSI1 815 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 IGF2BP3O00425 579 aaKnown RBP eCLIP8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 IFIT1P09914 478 aaKnown RBP8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 CETPP11597 493 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 ALDH1L2Q3SY69 923 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 EPHA10Q5JZY3 1008 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 DCAF15Q66K64 600 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 ERO1BQ86YB8 467 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 OPTNQ96CV9 577 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 TEPSINQ96N21 525 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 EFCC1Q9HA90 598 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 SCAF8Q9UPN6 1271 aaKnown RBP8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 ZNF521Q96K83 1311 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 SPEF2Q9C093 1822 aa8.98□□□□□ -0.97
SH3RF1-202ENST00000502315 SPDYE5A6NIY4 337 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 F8W031 263 aaPredicted RBP8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 SNAP23O00161 211 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 SEMA3EO15041 775 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 TNRC18O15417 2968 aaPredicted RBP8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 PLIN1O60240 522 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 FRAT2O75474 233 aaPredicted RBP8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 PPATQ06203 517 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 CRHR2Q13324 411 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 PRKG1Q13976 671 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 PUM3Q15397 648 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 METTL24Q5JXM2 366 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 SLC4A10Q6U841 1118 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 VGLL2Q8N8G2 317 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 LPIN2Q92539 896 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 KAZALD1Q96I82 304 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 ZNF594Q96JF6 807 aaPredicted RBP8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 CLMNQ96JQ2 1002 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 PTPN18Q99952 460 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 TDRD3Q9H7E2 651 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 SSC5DA1L4H1 1573 aa8.97□□□□□ -0.97
SH3RF1-202ENST00000502315 ZNF316A6NFI3 1004 aaPredicted RBP8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 TLR2O60603 784 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 IGSF3O75054 1194 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 CIAO1O76071 339 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 NBPF7P0C2Y1 421 aaPredicted RBP8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 FGFR2P21802 821 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 HOXD10P28358 340 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 GYG1P46976 350 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 MKRN3Q13064 507 aaKnown RBP8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 PPIL2Q13356 520 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 SNAPC2Q13487 334 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 KIF22Q14807 665 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 ZGPATQ8N5A5 531 aaKnown RBP8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 SUCLG2Q96I99 432 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 TMEM106CQ9BVX2 250 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 R3HDMLQ9H3Y0 253 aa8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 BICC1Q9H694 974 aaKnown RBP8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 GNL3LQ9NVN8 582 aaKnown RBP8.96□□□□□ -0.98
SH3RF1-202ENST00000502315 A0A1B0GUL6 1792 aa8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 MAP4K4O95819 1239 aaPredicted RBP8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 SLC5A1P13866 664 aa8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 GJA5P36382 358 aa8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 VGLL4Q14135 290 aa8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 TAF1CQ15572 869 aaPredicted RBP8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 APOBEC3HQ6NTF7 200 aaKnown RBP8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 MRPL50Q8N5N7 158 aaKnown RBP8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 FAM151AQ8WW52 585 aa8.95□□□□□ -0.98
SH3RF1-202ENST00000502315 PUS3Q9BZE2 481 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms