RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 AOPEPQ8N6M6 819 aa12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 BRF1Q92994 677 aa12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 SYT17Q9BSW7 474 aa12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 ST7Q9NRC1 585 aa12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 MKRN1Q9UHC7 482 aaKnown RBP12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 CCDC151A5D8V7 595 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 EIF3JO75822 258 aaKnown RBP12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 OAS2P29728 719 aaKnown RBP12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 ACTN2P35609 894 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 TAF7Q15545 349 aaPredicted RBP12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 CCDC191Q8NCU4 936 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 HNRNPLLQ8WVV9 542 aaKnown RBP12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 MRPS27Q92552 414 aaKnown RBP12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 RSPH14Q9UHP6 348 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 CCNL1Q9UK58 526 aaPredicted RBP12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 A0A1B0GUL7 405 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 ALDH1L1O75891 902 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 TMC6Q7Z403 805 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 SRLQ86TD4 932 aa12.72□□□□□ -0.37
AC055717.1-201ENST00000502221 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 C4BP0C0L5 1744 aa12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 POLR3GO15318 223 aaPredicted RBP12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 TBC1D8O95759 1140 aa12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 NOP2P46087 812 aaKnown RBP12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 ARMCX5Q6P1M9 558 aa12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 MPRIPQ6WCQ1 1025 aa12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 SDF4Q9BRK5 362 aa12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 FAM107BQ9H098 131 aa12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 TMX1Q9H3N1 280 aa12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 KIAA1468Q9P260 1216 aa12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 U3KPZ7 1027 aaPredicted RBP12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 MED23Q9ULK4 1368 aa12.71□□□□□ -0.37
AC055717.1-201ENST00000502221 NPHP1O15259 732 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 ARHGAP6O43182 974 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 URI1O94763 535 aaPredicted RBP12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 YY1P25490 414 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 ADD1P35611 737 aaKnown RBP12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 EVCP57679 992 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 NLRP12P59046 1061 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 MAP3K9P80192 1104 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 GOLGA1Q92805 767 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 SMARCE1Q969G3 411 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 NEK1Q96PY6 1258 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 XPO4Q9C0E2 1151 aaKnown RBP12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 MIS18AQ9NYP9 233 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 CHD4Q14839 1912 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 PALLDQ8WX93 1383 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 PFKFB2O60825 505 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 ERLIN1O75477 346 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 MAGEA9P43362 315 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 NMIQ13287 307 aaPredicted RBP12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 HDGFL1Q5TGJ6 251 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 ICE2Q659A1 982 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 ZNF530Q6P9A1 599 aaPredicted RBP12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 TRIM65Q6PJ69 517 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 FSIP1Q8NA03 581 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 NEK11Q8NG66 645 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 KCNG4Q8TDN1 519 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 DNAAF4Q8WXU2 420 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 ACBD3Q9H3P7 528 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 TFCP2L1Q9NZI6 479 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 IFNKQ9P0W0 207 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 MYH15Q9Y2K3 1946 aa12.7□□□□□ -0.38
AC055717.1-201ENST00000502221 UTRNP46939 3433 aa12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 BEND3Q5T5X7 828 aa12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 RSRC2Q7L4I2 434 aaKnown RBP12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 AMIGO3Q86WK7 504 aa12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 FMR1NBQ8N0W7 255 aaPredicted RBP12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 GBP3Q9H0R5 595 aa12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 ADAM21Q9UKJ8 722 aa12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 DHX16O60231 1041 aaKnown RBP12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 YEATS4O95619 227 aa12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 TXLNAP40222 546 aa12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 ME1P48163 572 aa12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 GTF2A1P52655 376 aaPredicted RBP12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 SMIM5Q71RC9 77 aa12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 COL23A1Q86Y22 540 aaPredicted RBP12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 RRP15Q9Y3B9 282 aaKnown RBP12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 PARP3Q9Y6F1 533 aa12.69□□□□□ -0.38
AC055717.1-201ENST00000502221 MAP2K7O14733 419 aa12.68□□□□□ -0.38
AC055717.1-201ENST00000502221 HDXQ7Z353 690 aa12.68□□□□□ -0.38
AC055717.1-201ENST00000502221 PPM1EQ8WY54 764 aa12.68□□□□□ -0.38
AC055717.1-201ENST00000502221 PIGBQ92521 554 aa12.68□□□□□ -0.38
AC055717.1-201ENST00000502221 CARD6Q9BX69 1037 aa12.68□□□□□ -0.38
AC055717.1-201ENST00000502221 FUT8Q9BYC5 575 aa12.68□□□□□ -0.38
AC055717.1-201ENST00000502221 PLEKHG2Q9H7P9 1386 aa12.68□□□□□ -0.38
AC055717.1-201ENST00000502221 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 NKX1-1Q15270 411 aaPredicted RBP12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 AMOTQ4VCS5 1084 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 GOLPH3LQ9H4A5 285 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 ATG3Q9NT62 314 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 STX10O60499 249 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 SLC3A2P08195 630 aaKnown RBP12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 PHKG2P15735 406 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms