RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 TAF1DQ9H5J8 278 aaPredicted RBP10.16□□□□□ -0.78
CRNDE-202ENST00000502066 DDX21Q9NR30 783 aaKnown RBP eCLIP10.16□□□□□ -0.78
CRNDE-202ENST00000502066 GDF2Q9UK05 429 aaPredicted RBP10.16□□□□□ -0.78
CRNDE-202ENST00000502066 C5P01031 1676 aa10.15□□□□□ -0.78
CRNDE-202ENST00000502066 LINC00114Q6XXX2 140 aa10.15□□□□□ -0.78
CRNDE-202ENST00000502066 DEFB123Q8N688 67 aa10.15□□□□□ -0.78
CRNDE-202ENST00000502066 NDUFB9Q9Y6M9 179 aa10.15□□□□□ -0.78
CRNDE-202ENST00000502066 WDR17Q8IZU2 1322 aa10.14□□□□□ -0.79
CRNDE-202ENST00000502066 ABCC6O95255 1503 aa10.14□□□□□ -0.79
CRNDE-202ENST00000502066 BRCA2P51587 3418 aa10.14□□□□□ -0.79
CRNDE-202ENST00000502066 FGFR3P22607 806 aa10.14□□□□□ -0.79
CRNDE-202ENST00000502066 PKN2Q16513 984 aaKnown RBP10.14□□□□□ -0.79
CRNDE-202ENST00000502066 GOLGA6L1Q8N7Z2 621 aa10.14□□□□□ -0.79
CRNDE-202ENST00000502066 ZNF592Q92610 1267 aa10.14□□□□□ -0.79
CRNDE-202ENST00000502066 IQCA1LA6NCM1 817 aa10.13□□□□□ -0.79
CRNDE-202ENST00000502066 EFHC2Q5JST6 749 aa10.13□□□□□ -0.79
CRNDE-202ENST00000502066 Q7L0L9 218 aa10.13□□□□□ -0.79
CRNDE-202ENST00000502066 ZIC5Q96T25 663 aa10.13□□□□□ -0.79
CRNDE-202ENST00000502066 ETNK1Q9HBU6 452 aa10.13□□□□□ -0.79
CRNDE-202ENST00000502066 CCDC87Q9NVE4 849 aa10.13□□□□□ -0.79
CRNDE-202ENST00000502066 ATXN7L1Q9ULK2 861 aaPredicted RBP10.13□□□□□ -0.79
CRNDE-202ENST00000502066 PAPPA2Q9BXP8 1791 aa10.12□□□□□ -0.79
CRNDE-202ENST00000502066 AKAP4Q5JQC9 854 aa10.12□□□□□ -0.79
CRNDE-202ENST00000502066 BTBD6Q96KE9 485 aa10.12□□□□□ -0.79
CRNDE-202ENST00000502066 P2RX7Q99572 595 aaKnown RBP10.12□□□□□ -0.79
CRNDE-202ENST00000502066 CARD10Q9BWT7 1032 aa10.12□□□□□ -0.79
CRNDE-202ENST00000502066 NDFIP2Q9NV92 336 aa10.12□□□□□ -0.79
CRNDE-202ENST00000502066 ANKARQ7Z5J8 1434 aa10.12□□□□□ -0.79
CRNDE-202ENST00000502066 TOGARAM1Q9Y4F4 1720 aa10.12□□□□□ -0.79
CRNDE-202ENST00000502066 PIEZO1Q92508 2521 aa10.11□□□□□ -0.79
CRNDE-202ENST00000502066 MYOM3Q5VTT5 1437 aa10.11□□□□□ -0.79
CRNDE-202ENST00000502066 C1QTNF9BB2RNN3 333 aa10.11□□□□□ -0.79
CRNDE-202ENST00000502066 IGSF5Q9NSI5 407 aa10.11□□□□□ -0.79
CRNDE-202ENST00000502066 CHIC2Q9UKJ5 165 aa10.11□□□□□ -0.79
CRNDE-202ENST00000502066 SCN4AP35499 1836 aa10.11□□□□□ -0.79
CRNDE-202ENST00000502066 TTC28Q96AY4 2481 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 NEURL1BA8MQ27 555 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 TRPA1O75762 1119 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 GCP02774 474 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 PLA2G4AP47712 749 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 LBRQ14739 615 aaKnown RBP10.1□□□□□ -0.79
CRNDE-202ENST00000502066 TLR1Q15399 786 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 CST9Q5W186 159 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 Q8N3U1 123 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 BANK1Q8NDB2 785 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 SLIT3O75094 1523 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 ADAMTSL1Q8N6G6 1762 aa10.1□□□□□ -0.79
CRNDE-202ENST00000502066 UBR3Q6ZT12 1888 aa10.09□□□□□ -0.79
CRNDE-202ENST00000502066 EN2P19622 333 aaPredicted RBP10.09□□□□□ -0.79
CRNDE-202ENST00000502066 CHRNA5P30532 468 aa10.09□□□□□ -0.79
CRNDE-202ENST00000502066 NBPF1Q3BBV0 1214 aa10.09□□□□□ -0.79
CRNDE-202ENST00000502066 SLCO4C1Q6ZQN7 724 aa10.09□□□□□ -0.79
CRNDE-202ENST00000502066 PPARGC1BQ86YN6 1023 aaKnown RBP10.09□□□□□ -0.79
CRNDE-202ENST00000502066 RHBDD1Q8TEB9 315 aa10.09□□□□□ -0.79
CRNDE-202ENST00000502066 DOLKQ9UPQ8 538 aa10.09□□□□□ -0.79
CRNDE-202ENST00000502066 TAF1LQ8IZX4 1826 aa10.09□□□□□ -0.79
CRNDE-202ENST00000502066 PPIP5K1Q6PFW1 1433 aa10.08□□□□□ -0.8
CRNDE-202ENST00000502066 EPXP11678 715 aa10.08□□□□□ -0.8
CRNDE-202ENST00000502066 SAFB2Q14151 953 aaKnown RBP eCLIP10.08□□□□□ -0.8
CRNDE-202ENST00000502066 OXLD1Q5BKU9 147 aa10.08□□□□□ -0.8
CRNDE-202ENST00000502066 TMEM132EQ6IEE7 984 aa10.08□□□□□ -0.8
CRNDE-202ENST00000502066 CD163Q86VB7 1156 aa10.08□□□□□ -0.8
CRNDE-202ENST00000502066 ZCCHC2Q9C0B9 1178 aaKnown RBP10.08□□□□□ -0.8
CRNDE-202ENST00000502066 MTMR10Q9NXD2 777 aa10.08□□□□□ -0.8
CRNDE-202ENST00000502066 SAGE1Q9NXZ1 904 aa10.08□□□□□ -0.8
CRNDE-202ENST00000502066 ABCC11Q96J66 1382 aa10.08□□□□□ -0.8
CRNDE-202ENST00000502066 PPLO60437 1756 aa10.08□□□□□ -0.8
CRNDE-202ENST00000502066 TRPM7Q96QT4 1865 aa10.08□□□□□ -0.8
CRNDE-202ENST00000502066 DICER1Q9UPY3 1922 aaKnown RBP10.07□□□□□ -0.8
CRNDE-202ENST00000502066 GNB5O14775 395 aa10.07□□□□□ -0.8
CRNDE-202ENST00000502066 FBXO46Q6PJ61 603 aaPredicted RBP10.07□□□□□ -0.8
CRNDE-202ENST00000502066 RNF135Q8IUD6 432 aa10.07□□□□□ -0.8
CRNDE-202ENST00000502066 PRO3102Q9H379 93 aa10.07□□□□□ -0.8
CRNDE-202ENST00000502066 HDAC9Q9UKV0 1011 aa10.07□□□□□ -0.8
CRNDE-202ENST00000502066 HCN2Q9UL51 889 aa10.07□□□□□ -0.8
CRNDE-202ENST00000502066 BAHCC1Q9P281 2608 aa10.07□□□□□ -0.8
CRNDE-202ENST00000502066 MUC3AQ02505 3323 aa10.07□□□□□ -0.8
CRNDE-202ENST00000502066 ANKRD30AQ9BXX3 1397 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 NFKBIEO00221 500 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 CHRNA4P43681 627 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 USP4Q13107 963 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 TBC1D9Q6ZT07 1266 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 SAPCD2Q86UD0 394 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 ABTB2Q8N961 1025 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 CRISPLD1Q9H336 500 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 DNAAF2Q9NVR5 837 aaKnown RBP10.06□□□□□ -0.8
CRNDE-202ENST00000502066 RNF186Q9NXI6 227 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 TBC1D2BQ9UPU7 963 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 C4BP0C0L5 1744 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 SCN11AQ9UI33 1791 aa10.06□□□□□ -0.8
CRNDE-202ENST00000502066 NSD2O96028 1365 aa10.05□□□□□ -0.8
CRNDE-202ENST00000502066 SYNE4Q8N205 404 aa10.05□□□□□ -0.8
CRNDE-202ENST00000502066 LAMA2P24043 3122 aaKnown RBP10.05□□□□□ -0.8
CRNDE-202ENST00000502066 C4AP0C0L4 1744 aa10.04□□□□□ -0.8
CRNDE-202ENST00000502066 USP47Q96K76 1375 aa10.04□□□□□ -0.8
CRNDE-202ENST00000502066 RGPD5Q99666 1765 aa10.04□□□□□ -0.8
CRNDE-202ENST00000502066 DCDC2BA2VCK2 349 aa10.04□□□□□ -0.8
CRNDE-202ENST00000502066 TRAF5O00463 557 aa10.04□□□□□ -0.8
CRNDE-202ENST00000502066 CD33P20138 364 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms