RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 ZNF384Q8TF68 577 aa21.61■■□□□ 1.05
LINC00535-201ENST00000501400 RPGRQ92834 1020 aaKnown RBP21.61■■□□□ 1.05
LINC00535-201ENST00000501400 ABCF2Q9UG63 623 aa21.61■■□□□ 1.05
LINC00535-201ENST00000501400 LTBP1Q14766 1721 aa21.6■■□□□ 1.05
LINC00535-201ENST00000501400 HIBADHP31937 336 aaKnown RBP21.6■■□□□ 1.05
LINC00535-201ENST00000501400 FBXL16Q8N461 479 aa21.6■■□□□ 1.05
LINC00535-201ENST00000501400 LMBRD1Q9NUN5 540 aa21.6■■□□□ 1.05
LINC00535-201ENST00000501400 ZBTB22O15209 634 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 ZSCAN22P10073 491 aaPredicted RBP21.59■■□□□ 1.05
LINC00535-201ENST00000501400 ANTXR2P58335 489 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 MIGA1Q8NAN2 632 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 NKX2-3Q8TAU0 364 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 TCHHQ07283 1943 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 XDHP47989 1333 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 KLRG2A4D1S0 409 aaPredicted RBP21.59■■□□□ 1.05
LINC00535-201ENST00000501400 GSG1L2A8MUP6 293 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 PATL2C9JE40 543 aaKnown RBP21.59■■□□□ 1.05
LINC00535-201ENST00000501400 PRKAB2O43741 272 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 APPP05067 770 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 CYP7A1P22680 504 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 APOBRQ0VD83 1088 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
LINC00535-201ENST00000501400 KIAA1551Q9HCM1 1747 aa21.58■■□□□ 1.05
LINC00535-201ENST00000501400 COL11A2P13942 1736 aaPredicted RBP21.58■■□□□ 1.05
LINC00535-201ENST00000501400 SCRN1Q12765 414 aa21.58■■□□□ 1.04
LINC00535-201ENST00000501400 IFNL3Q8IZI9 196 aa21.58■■□□□ 1.04
LINC00535-201ENST00000501400 GPHNQ9NQX3 736 aaPredicted RBP21.58■■□□□ 1.04
LINC00535-201ENST00000501400 RAI14Q9P0K7 980 aa21.58■■□□□ 1.04
LINC00535-201ENST00000501400 MTMR6Q9Y217 621 aa21.58■■□□□ 1.04
LINC00535-201ENST00000501400 PFKFB2O60825 505 aa21.57■■□□□ 1.04
LINC00535-201ENST00000501400 HOXA10P31260 410 aaPredicted RBP21.57■■□□□ 1.04
LINC00535-201ENST00000501400 FGD1P98174 961 aa21.57■■□□□ 1.04
LINC00535-201ENST00000501400 NCOA7Q8NI08 942 aa21.57■■□□□ 1.04
LINC00535-201ENST00000501400 ANKIB1Q9P2G1 1089 aa21.57■■□□□ 1.04
LINC00535-201ENST00000501400 LEMD3Q9Y2U8 911 aa21.57■■□□□ 1.04
LINC00535-201ENST00000501400 CCDC88AQ3V6T2 1871 aa21.57■■□□□ 1.04
LINC00535-201ENST00000501400 GZF1Q9H116 711 aaPredicted RBP21.57■■□□□ 1.04
LINC00535-201ENST00000501400 PRC1O43663 620 aa21.56■■□□□ 1.04
LINC00535-201ENST00000501400 JAK2O60674 1132 aa21.56■■□□□ 1.04
LINC00535-201ENST00000501400 EVCP57679 992 aa21.56■■□□□ 1.04
LINC00535-201ENST00000501400 GPSM2P81274 684 aa21.56■■□□□ 1.04
LINC00535-201ENST00000501400 SKOR2Q2VWA4 1001 aaPredicted RBP21.56■■□□□ 1.04
LINC00535-201ENST00000501400 RBM17Q96I25 401 aaKnown RBP21.56■■□□□ 1.04
LINC00535-201ENST00000501400 RIOK1Q9BRS2 568 aaKnown RBP21.56■■□□□ 1.04
LINC00535-201ENST00000501400 NEDD4P46934 1319 aa21.56■■□□□ 1.04
LINC00535-201ENST00000501400 WDR19Q8NEZ3 1342 aa21.56■■□□□ 1.04
LINC00535-201ENST00000501400 F13A1P00488 732 aa21.55■■□□□ 1.04
LINC00535-201ENST00000501400 GNAT2P19087 354 aa21.55■■□□□ 1.04
LINC00535-201ENST00000501400 MCM5P33992 734 aa21.55■■□□□ 1.04
LINC00535-201ENST00000501400 NAPBQ9H115 298 aa21.55■■□□□ 1.04
LINC00535-201ENST00000501400 SLC4A4Q9Y6R1 1079 aa21.55■■□□□ 1.04
LINC00535-201ENST00000501400 RALYLQ86SE5 291 aaKnown RBP21.55■■□□□ 1.04
LINC00535-201ENST00000501400 GPR101Q96P66 508 aaPredicted RBP21.55■■□□□ 1.04
LINC00535-201ENST00000501400 TACC3Q9Y6A5 838 aa21.55■■□□□ 1.04
LINC00535-201ENST00000501400 KLHL40Q2TBA0 621 aa21.54■■□□□ 1.04
LINC00535-201ENST00000501400 C15orf52Q6ZUT6 534 aaKnown RBP21.54■■□□□ 1.04
LINC00535-201ENST00000501400 NLGN1Q8N2Q7 840 aa21.54■■□□□ 1.04
LINC00535-201ENST00000501400 NSUN4Q96CB9 384 aaKnown RBP21.54■■□□□ 1.04
LINC00535-201ENST00000501400 PRDX5P30044 214 aa21.53■■□□□ 1.04
LINC00535-201ENST00000501400 PDIA3P30101 505 aaKnown RBP21.53■■□□□ 1.04
LINC00535-201ENST00000501400 CHAF1AQ13111 956 aaPredicted RBP21.53■■□□□ 1.04
LINC00535-201ENST00000501400 CYB5R4Q7L1T6 521 aa21.53■■□□□ 1.04
LINC00535-201ENST00000501400 SMARCC2Q8TAQ2 1214 aa21.53■■□□□ 1.04
LINC00535-201ENST00000501400 CRAMP1Q96RY5 1269 aa21.53■■□□□ 1.04
LINC00535-201ENST00000501400 BAZ2AQ9UIF9 1905 aaKnown RBP21.53■■□□□ 1.04
LINC00535-201ENST00000501400 MAGEB6P1A0A0J9YX57 407 aa21.53■■□□□ 1.04
LINC00535-201ENST00000501400 PRPF40AO75400 957 aaKnown RBP21.53■■□□□ 1.04
LINC00535-201ENST00000501400 CTDNEP1O95476 244 aa21.53■■□□□ 1.04
LINC00535-201ENST00000501400 FOXD4L6Q3SYB3 417 aaPredicted RBP21.53■■□□□ 1.04
LINC00535-201ENST00000501400 NAA16Q6N069 864 aaPredicted RBP21.53■■□□□ 1.04
LINC00535-201ENST00000501400 FOXD4L3Q6VB84 417 aaPredicted RBP21.53■■□□□ 1.04
LINC00535-201ENST00000501400 ZNF274Q96GC6 653 aaPredicted RBP21.53■■□□□ 1.04
LINC00535-201ENST00000501400 MECOMQ03112 1051 aa21.52■■□□□ 1.04
LINC00535-201ENST00000501400 CDC37L1Q7L3B6 337 aa21.52■■□□□ 1.04
LINC00535-201ENST00000501400 NSUN7Q8NE18 718 aaKnown RBP21.52■■□□□ 1.04
LINC00535-201ENST00000501400 FLAD1Q8NFF5 587 aa21.52■■□□□ 1.04
LINC00535-201ENST00000501400 JAG2Q9Y219 1238 aa21.52■■□□□ 1.04
LINC00535-201ENST00000501400 VPS37CA5D8V6 355 aaPredicted RBP21.51■■□□□ 1.03
LINC00535-201ENST00000501400 DYNLL1P63167 89 aaKnown RBP21.51■■□□□ 1.03
LINC00535-201ENST00000501400 CTDSPL2Q05D32 466 aa21.51■■□□□ 1.03
LINC00535-201ENST00000501400 LARP1BQ659C4 914 aaKnown RBP21.51■■□□□ 1.03
LINC00535-201ENST00000501400 TDRD7Q8NHU6 1098 aaKnown RBP21.51■■□□□ 1.03
LINC00535-201ENST00000501400 SDR42E1Q8WUS8 393 aa21.51■■□□□ 1.03
LINC00535-201ENST00000501400 NCOA5Q9HCD5 579 aaKnown RBP21.51■■□□□ 1.03
LINC00535-201ENST00000501400 INCENPQ9NQS7 918 aa21.51■■□□□ 1.03
LINC00535-201ENST00000501400 BRPF3Q9ULD4 1205 aa21.51■■□□□ 1.03
LINC00535-201ENST00000501400 DDX49Q9Y6V7 483 aaKnown RBP21.51■■□□□ 1.03
LINC00535-201ENST00000501400 SALL1Q9NSC2 1324 aa21.51■■□□□ 1.03
LINC00535-201ENST00000501400 B4E1Z4 1266 aa21.51■■□□□ 1.03
LINC00535-201ENST00000501400 BBOX1O75936 387 aa21.51■■□□□ 1.03
LINC00535-201ENST00000501400 TDO2P48775 406 aa21.51■■□□□ 1.03
LINC00535-201ENST00000501400 LLPHQ9BRT6 129 aaKnown RBP21.51■■□□□ 1.03
LINC00535-201ENST00000501400 ANO8Q9HCE9 1232 aaPredicted RBP21.51■■□□□ 1.03
LINC00535-201ENST00000501400 QSER1Q2KHR3 1735 aa21.5■■□□□ 1.03
LINC00535-201ENST00000501400 DUOX1Q9NRD9 1551 aa21.5■■□□□ 1.03
LINC00535-201ENST00000501400 UFL1O94874 794 aa21.5■■□□□ 1.03
LINC00535-201ENST00000501400 PDCP20941 246 aa21.5■■□□□ 1.03
LINC00535-201ENST00000501400 CCT2P78371 535 aaKnown RBP21.5■■□□□ 1.03
LINC00535-201ENST00000501400 TRDNQ13061 729 aa21.5■■□□□ 1.03
LINC00535-201ENST00000501400 GPT2Q8TD30 523 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 353.3 ms