RNA–Protein interactions for RNA: ENST00000498822.5

PCBP4-218, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-218ENST00000498822 MICU3Q86XE3 530 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 TTLL11Q8NHH1 800 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 NCOA7Q8NI08 942 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 TRMT1Q9NXH9 659 aaKnown RBP18.6■□□□□ 0.57
PCBP4-218ENST00000498822 AKAP2Q9Y2D5 859 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 RIPOR2Q9Y4F9 1068 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 DDX60Q8IY21 1712 aaKnown RBP18.6■□□□□ 0.57
PCBP4-218ENST00000498822 B4E1Z4 1266 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 TNNT1P13805 278 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 CHAF1AQ13111 956 aaPredicted RBP18.6■□□□□ 0.57
PCBP4-218ENST00000498822 MYSM1Q5VVJ2 828 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 LRRC8AQ8IWT6 810 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 FBXO18Q8NFZ0 1043 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 CARD10Q9BWT7 1032 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 TBC1D2BQ9UPU7 963 aa18.6■□□□□ 0.57
PCBP4-218ENST00000498822 TPD52L1Q16890 204 aaPredicted RBP18.59■□□□□ 0.57
PCBP4-218ENST00000498822 RTEL1Q9NZ71 1219 aa18.59■□□□□ 0.57
PCBP4-218ENST00000498822 CSF1RP07333 972 aa18.59■□□□□ 0.57
PCBP4-218ENST00000498822 CDC27P30260 824 aa18.59■□□□□ 0.57
PCBP4-218ENST00000498822 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.59■□□□□ 0.57
PCBP4-218ENST00000498822 NLRP10Q86W26 655 aa18.59■□□□□ 0.57
PCBP4-218ENST00000498822 KLHL34Q8N239 644 aa18.59■□□□□ 0.57
PCBP4-218ENST00000498822 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.59■□□□□ 0.57
PCBP4-218ENST00000498822 CTNNA3Q9UI47 895 aa18.59■□□□□ 0.57
PCBP4-218ENST00000498822 ZBTB1Q9Y2K1 713 aa18.59■□□□□ 0.57
PCBP4-218ENST00000498822 ECM29Q5VYK3 1845 aa18.58■□□□□ 0.57
PCBP4-218ENST00000498822 SPDYE4A6NLX3 237 aa18.58■□□□□ 0.57
PCBP4-218ENST00000498822 WDHD1O75717 1129 aaPredicted RBP18.58■□□□□ 0.57
PCBP4-218ENST00000498822 EVCP57679 992 aa18.58■□□□□ 0.57
PCBP4-218ENST00000498822 PPP4R3BQ5MIZ7 849 aa18.58■□□□□ 0.57
PCBP4-218ENST00000498822 ZNF532Q9HCE3 1301 aa18.58■□□□□ 0.57
PCBP4-218ENST00000498822 A0A0G2JS52 829 aa18.58■□□□□ 0.56
PCBP4-218ENST00000498822 SPTLC2O15270 562 aa18.58■□□□□ 0.56
PCBP4-218ENST00000498822 CBX1P83916 185 aa18.58■□□□□ 0.56
PCBP4-218ENST00000498822 ADALQ6DHV7 355 aa18.58■□□□□ 0.56
PCBP4-218ENST00000498822 ITGB4P16144 1822 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 CCDC69A6NI79 296 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 KIF23Q02241 960 aaPredicted RBP18.57■□□□□ 0.56
PCBP4-218ENST00000498822 ANO10Q9NW15 660 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 ABCA3Q99758 1704 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 MAP3K15Q6ZN16 1313 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 CTAGE5O15320 804 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 ADD2P35612 726 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 CTSWP56202 376 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 NBPF11Q86T75 865 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 CEP57L1Q8IYX8 460 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 TRMT112Q9UI30 125 aaKnown RBP18.57■□□□□ 0.56
PCBP4-218ENST00000498822 TACC3Q9Y6A5 838 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 MYH3P11055 1940 aa18.57■□□□□ 0.56
PCBP4-218ENST00000498822 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
PCBP4-218ENST00000498822 ZFYP08048 801 aaPredicted RBP18.56■□□□□ 0.56
PCBP4-218ENST00000498822 SKILP12757 684 aa18.56■□□□□ 0.56
PCBP4-218ENST00000498822 SARM1Q6SZW1 724 aa18.56■□□□□ 0.56
PCBP4-218ENST00000498822 GIGYF2Q6Y7W6 1299 aaKnown RBP18.56■□□□□ 0.56
PCBP4-218ENST00000498822 PFKFB1P16118 471 aa18.56■□□□□ 0.56
PCBP4-218ENST00000498822 CTDSPL2Q05D32 466 aa18.56■□□□□ 0.56
PCBP4-218ENST00000498822 VGLL2Q8N8G2 317 aa18.56■□□□□ 0.56
PCBP4-218ENST00000498822 CCDC94Q9BW85 323 aaPredicted RBP18.56■□□□□ 0.56
PCBP4-218ENST00000498822 SLAIN2Q9P270 581 aa18.56■□□□□ 0.56
PCBP4-218ENST00000498822 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.56■□□□□ 0.56
PCBP4-218ENST00000498822 V9GYY5 206 aaPredicted RBP18.56■□□□□ 0.56
PCBP4-218ENST00000498822 U2AF2P26368 475 aaKnown RBP eCLIP18.55■□□□□ 0.564e-7■■■□□ 17.3
PCBP4-218ENST00000498822 CCZ1BP86790 482 aa18.55■□□□□ 0.56
PCBP4-218ENST00000498822 CCZ1P86791 482 aaPredicted RBP18.55■□□□□ 0.56
PCBP4-218ENST00000498822 CCDC102BQ68D86 513 aa18.55■□□□□ 0.56
PCBP4-218ENST00000498822 MRFAP1L1Q96HT8 127 aa18.55■□□□□ 0.56
PCBP4-218ENST00000498822 CLIC6Q96NY7 704 aa18.55■□□□□ 0.56
PCBP4-218ENST00000498822 UBN2Q6ZU65 1347 aa18.55■□□□□ 0.56
PCBP4-218ENST00000498822 ZNF202O95125 648 aa18.55■□□□□ 0.56
PCBP4-218ENST00000498822 METAP2P50579 478 aaKnown RBP eCLIP18.55■□□□□ 0.56
PCBP4-218ENST00000498822 AXDND1Q5T1B0 1012 aaPredicted RBP18.55■□□□□ 0.56
PCBP4-218ENST00000498822 ALG1Q9BT22 464 aa18.55■□□□□ 0.56
PCBP4-218ENST00000498822 KIAA1468Q9P260 1216 aa18.55■□□□□ 0.56
PCBP4-218ENST00000498822 SMC2O95347 1197 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 PDE6AP16499 860 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 SOS2Q07890 1332 aaPredicted RBP18.54■□□□□ 0.56
PCBP4-218ENST00000498822 NCBP1Q09161 790 aaKnown RBP18.54■□□□□ 0.56
PCBP4-218ENST00000498822 SPECC1Q5M775 1068 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 ANO1Q5XXA6 986 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 VPS37DQ86XT2 251 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 CMTR1Q8N1G2 835 aaKnown RBP18.54■□□□□ 0.56
PCBP4-218ENST00000498822 ZKSCAN3Q9BRR0 538 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 ZNF335Q9H4Z2 1342 aaPredicted RBP18.54■□□□□ 0.56
PCBP4-218ENST00000498822 POLR3EQ9NVU0 708 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 ANKRD18BA2A2Z9 1011 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 RANBP6O60518 1105 aaKnown RBP18.54■□□□□ 0.56
PCBP4-218ENST00000498822 CDC25BP30305 580 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 SYNE3Q6ZMZ3 975 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 XPO4Q9C0E2 1151 aaKnown RBP18.54■□□□□ 0.56
PCBP4-218ENST00000498822 BTG4Q9NY30 223 aa18.54■□□□□ 0.56
PCBP4-218ENST00000498822 ANGEL1Q9UNK9 670 aaKnown RBP18.54■□□□□ 0.56
PCBP4-218ENST00000498822 NUP98P52948 1817 aa18.53■□□□□ 0.56
PCBP4-218ENST00000498822 SLIT2O94813 1529 aa18.53■□□□□ 0.56
PCBP4-218ENST00000498822 PLEKHG2Q9H7P9 1386 aa18.53■□□□□ 0.56
PCBP4-218ENST00000498822 PLA2G12BQ9BX93 195 aa18.53■□□□□ 0.56
PCBP4-218ENST00000498822 EPB41L4AQ9HCS5 686 aaPredicted RBP18.53■□□□□ 0.56
PCBP4-218ENST00000498822 IFNKQ9P0W0 207 aa18.53■□□□□ 0.56
PCBP4-218ENST00000498822 SMIM22K7EJ46 135 aa18.53■□□□□ 0.56
PCBP4-218ENST00000498822 PRKAB2O43741 272 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms