RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	FOXO4	P98177	505 aa		13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	CHRND	Q07001	517 aa		13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	LDHAL6A	Q6ZMR3	332 aa		13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	CNTROB	Q8N137	903 aa		13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	SUCLG2	Q96I99	432 aa		13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	RBM27	Q9P2N5	1060 aa	Known RBP	13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	CNOT7	Q9UIV1	285 aa	Known RBP	13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	LEMD3	Q9Y2U8	911 aa		13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	ZNF804B	A4D1E1	1349 aa		13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	CEP350	Q5VT06	3117 aa		13.37	□□□□□ -0.27
CDK11A-222	ENST00000498810	RBM26	Q5T8P6	1007 aa	Known RBP	13.37	□□□□□ -0.27
CDK11A-222	ENST00000498810	KLRG1	Q96E93	195 aa		13.37	□□□□□ -0.27
CDK11A-222	ENST00000498810	ABT1	Q9ULW3	272 aa	Known RBP	13.37	□□□□□ -0.27
CDK11A-222	ENST00000498810	NOB1	Q9ULX3	412 aa	Known RBP	13.37	□□□□□ -0.27
CDK11A-222	ENST00000498810	TMEM88B	A6NKF7	163 aa		13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	C3orf80	F5H4A9	247 aa		13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	UBTFL1	P0CB47	393 aa	Predicted RBP	13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	PODN	Q7Z5L7	613 aa		13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	TRMT2A	Q8IZ69	625 aa	Known RBP	13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	TTC13	Q8NBP0	860 aa		13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	FRAT1	Q92837	279 aa	Predicted RBP	13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	ZNF594	Q96JF6	807 aa	Predicted RBP	13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	BICC1	Q9H694	974 aa	Known RBP	13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	ZNF408	Q9H9D4	720 aa		13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	POLR2A	P24928	1970 aa	Known RBP	13.36	□□□□□ -0.27
CDK11A-222	ENST00000498810	USP17L3	A6NCW0	530 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	USP17L4	A6NCW7	530 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	TAF5L	O75529	589 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	KIF4B	Q2VIQ3	1234 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	EPHA10	Q5JZY3	1008 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	USP17L1	Q7RTZ2	530 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	ZNF804A	Q7Z570	1209 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	HELB	Q8NG08	1087 aa	Predicted RBP	13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	TRPM4	Q8TD43	1214 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	DPF2	Q92785	391 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	COA1	Q9GZY4	146 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	MKRN1	Q9UHC7	482 aa	Known RBP	13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	HDAC5	Q9UQL6	1122 aa		13.35	□□□□□ -0.27
CDK11A-222	ENST00000498810	ZNF646	O15015	1829 aa	Predicted RBP	13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	ARAP2	Q8WZ64	1704 aa		13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	IPO8	O15397	1037 aa	Known RBP	13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	RARS	P54136	660 aa	Known RBP	13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	SAMD7	Q7Z3H4	446 aa		13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	AGBL3	Q8NEM8	1001 aa		13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	DCPS	Q96C86	337 aa	Known RBP	13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	KCNQ5	Q9NR82	932 aa		13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	UTY	O14607	1347 aa		13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	MYO3B	Q8WXR4	1341 aa		13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	PASK	Q96RG2	1323 aa		13.34	□□□□□ -0.27
CDK11A-222	ENST00000498810	SHTN1	A0MZ66	631 aa		13.33	□□□□□ -0.28
CDK11A-222	ENST00000498810	VIL1	P09327	827 aa	Known RBP	13.33	□□□□□ -0.28
CDK11A-222	ENST00000498810	METTL24	Q5JXM2	366 aa		13.33	□□□□□ -0.28
CDK11A-222	ENST00000498810	OGFOD1	Q8N543	542 aa		13.33	□□□□□ -0.28
CDK11A-222	ENST00000498810	TATDN2	Q93075	761 aa		13.33	□□□□□ -0.28
CDK11A-222	ENST00000498810	ECM29	Q5VYK3	1845 aa		13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	SMAP	O00193	183 aa		13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	ITGBL1	O95965	494 aa	Predicted RBP	13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	USP17L8	P0C7I0	530 aa		13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	KLRK1	P26718	216 aa		13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	GRM1	Q13255	1194 aa		13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	IFFO2	Q5TF58	517 aa		13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	VPS37D	Q86XT2	251 aa		13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	ZC3H15	Q8WU90	426 aa	Known RBP	13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	HDAC9	Q9UKV0	1011 aa		13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	ZBED9	Q6R2W3	1325 aa		13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	MROH5	Q6ZUA9	1318 aa		13.32	□□□□□ -0.28
CDK11A-222	ENST00000498810	WTIP	A6NIX2	430 aa	Predicted RBP	13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	TRAF5	O00463	557 aa		13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	CELF2	O95319	508 aa	Known RBP	13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	GTF2I	P78347	998 aa		13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	TTLL5	Q6EMB2	1281 aa		13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	CDC37L1	Q7L3B6	337 aa		13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	SULF1	Q8IWU6	871 aa		13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	FTSJ3	Q8IY81	847 aa	Known RBP	13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	USP44	Q9H0E7	712 aa		13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	GGA3	Q9NZ52	723 aa		13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	CNTNAP1	P78357	1384 aa		13.31	□□□□□ -0.28
CDK11A-222	ENST00000498810	ZNF609	O15014	1411 aa		13.3	□□□□□ -0.28
CDK11A-222	ENST00000498810	SEMA3E	O15041	775 aa		13.3	□□□□□ -0.28
CDK11A-222	ENST00000498810	FRAT2	O75474	233 aa	Predicted RBP	13.3	□□□□□ -0.28
CDK11A-222	ENST00000498810	RABL6	Q3YEC7	729 aa	Predicted RBP	13.3	□□□□□ -0.28
CDK11A-222	ENST00000498810	STRIP1	Q5VSL9	837 aa		13.3	□□□□□ -0.28
CDK11A-222	ENST00000498810	KRT26	Q7Z3Y9	468 aa		13.3	□□□□□ -0.28
CDK11A-222	ENST00000498810	TXNRD3	Q86VQ6	643 aa		13.3	□□□□□ -0.28
CDK11A-222	ENST00000498810	DNAJC5G	Q8N7S2	189 aa		13.3	□□□□□ -0.28
CDK11A-222	ENST00000498810	ANKRD44	Q8N8A2	993 aa		13.3	□□□□□ -0.28
CDK11A-222	ENST00000498810	WBP1L	Q9NX94	342 aa		13.3	□□□□□ -0.28
CDK11A-222	ENST00000498810	SNAP23	O00161	211 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	GNAI3	P08754	354 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	BRPF1	P55201	1214 aa	Predicted RBP	13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	ZKSCAN2	Q63HK3	967 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	NYAP1	Q6ZVC0	841 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	USP48	Q86UV5	1035 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	ARHGAP45	Q92619	1136 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	CLUAP1	Q96AJ1	413 aa		13.29	□□□□□ -0.28

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