RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 CDC37L1Q7L3B6 337 aa20.53■□□□□ 0.88
PRKCB-210ENST00000498739 MTMR14Q8NCE2 650 aa20.53■□□□□ 0.88
PRKCB-210ENST00000498739 ZBED3Q96IU2 234 aaPredicted RBP20.53■□□□□ 0.88
PRKCB-210ENST00000498739 ZNF512BQ96KM6 892 aaPredicted RBP20.53■□□□□ 0.88
PRKCB-210ENST00000498739 SNRKQ9NRH2 765 aa20.53■□□□□ 0.88
PRKCB-210ENST00000498739 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
PRKCB-210ENST00000498739 SPDYE2BA6NHP3 402 aa20.52■□□□□ 0.88
PRKCB-210ENST00000498739 TRAF5O00463 557 aa20.52■□□□□ 0.88
PRKCB-210ENST00000498739 SPDYE6P0CI01 402 aa20.52■□□□□ 0.88
PRKCB-210ENST00000498739 HDAC1Q13547 482 aaPredicted RBP20.52■□□□□ 0.88
PRKCB-210ENST00000498739 KRT26Q7Z3Y9 468 aa20.52■□□□□ 0.88
PRKCB-210ENST00000498739 USP48Q86UV5 1035 aa20.52■□□□□ 0.88
PRKCB-210ENST00000498739 TEKT1Q969V4 418 aa20.52■□□□□ 0.88
PRKCB-210ENST00000498739 ADM5C9JUS6 153 aa20.51■□□□□ 0.87
PRKCB-210ENST00000498739 MYO1BO43795 1136 aa20.51■□□□□ 0.87
PRKCB-210ENST00000498739 APLP1P51693 650 aa20.51■□□□□ 0.87
PRKCB-210ENST00000498739 HDLBPQ00341 1268 aaKnown RBP20.51■□□□□ 0.87
PRKCB-210ENST00000498739 FMR1Q06787 632 aaKnown RBP eCLIP20.51■□□□□ 0.871e-6■■■□□ 19
PRKCB-210ENST00000498739 SULF1Q8IWU6 871 aa20.51■□□□□ 0.87
PRKCB-210ENST00000498739 PRMT6Q96LA8 375 aaPredicted RBP20.51■□□□□ 0.87
PRKCB-210ENST00000498739 PITPNM2Q9BZ72 1349 aa20.51■□□□□ 0.87
PRKCB-210ENST00000498739 SPTY2D1Q68D10 685 aaPredicted RBP20.5■□□□□ 0.87
PRKCB-210ENST00000498739 TBC1D9Q6ZT07 1266 aa20.5■□□□□ 0.87
PRKCB-210ENST00000498739 RWDD1Q9H446 243 aaPredicted RBP20.5■□□□□ 0.87
PRKCB-210ENST00000498739 SCAF8Q9UPN6 1271 aaKnown RBP20.5■□□□□ 0.87
PRKCB-210ENST00000498739 CLRN2A0PK11 232 aa20.49■□□□□ 0.87
PRKCB-210ENST00000498739 ZAP70P43403 619 aa20.49■□□□□ 0.87
PRKCB-210ENST00000498739 DIXDC1Q155Q3 683 aa20.49■□□□□ 0.87
PRKCB-210ENST00000498739 DLK2Q6UY11 383 aa20.49■□□□□ 0.87
PRKCB-210ENST00000498739 ERICH6Q7L0X2 663 aa20.49■□□□□ 0.87
PRKCB-210ENST00000498739 DZIP1Q86YF9 867 aaKnown RBP20.49■□□□□ 0.87
PRKCB-210ENST00000498739 GCC1Q96CN9 775 aa20.49■□□□□ 0.87
PRKCB-210ENST00000498739 AOX1Q06278 1338 aa20.49■□□□□ 0.87
PRKCB-210ENST00000498739 MRIQ9BWK5 157 aa20.48■□□□□ 0.87
PRKCB-210ENST00000498739 TDRD3Q9H7E2 651 aaKnown RBP20.48■□□□□ 0.87
PRKCB-210ENST00000498739 ZNF408Q9H9D4 720 aa20.48■□□□□ 0.87
PRKCB-210ENST00000498739 CYP2E1P05181 493 aaPredicted RBP20.47■□□□□ 0.87
PRKCB-210ENST00000498739 HHIPL2Q6UWX4 724 aa20.47■□□□□ 0.87
PRKCB-210ENST00000498739 APOBEC3FQ8IUX4 373 aaKnown RBP20.47■□□□□ 0.87
PRKCB-210ENST00000498739 ZDHHC15Q96MV8 337 aa20.47■□□□□ 0.87
PRKCB-210ENST00000498739 VEZTQ9HBM0 779 aa20.47■□□□□ 0.87
PRKCB-210ENST00000498739 RAI14Q9P0K7 980 aa20.47■□□□□ 0.87
PRKCB-210ENST00000498739 LRP2BPQ9P2M1 347 aa20.47■□□□□ 0.87
PRKCB-210ENST00000498739 ZBTB47Q9UFB7 747 aaPredicted RBP20.47■□□□□ 0.87
PRKCB-210ENST00000498739 NDUFB9Q9Y6M9 179 aa20.47■□□□□ 0.87
PRKCB-210ENST00000498739 IGHDP01880 384 aa20.46■□□□□ 0.87
PRKCB-210ENST00000498739 HTRA3P83110 453 aa20.46■□□□□ 0.87
PRKCB-210ENST00000498739 MECOMQ03112 1051 aa20.46■□□□□ 0.87
PRKCB-210ENST00000498739 ANKRD45Q5TZF3 282 aa20.46■□□□□ 0.87
PRKCB-210ENST00000498739 ZNF70Q9UC06 446 aaPredicted RBP20.46■□□□□ 0.87
PRKCB-210ENST00000498739 DAGLAQ9Y4D2 1042 aa20.46■□□□□ 0.87
PRKCB-210ENST00000498739 TMEM88BA6NKF7 163 aa20.45■□□□□ 0.86
PRKCB-210ENST00000498739 CELF2O95319 508 aaKnown RBP20.45■□□□□ 0.86
PRKCB-210ENST00000498739 CENPBP07199 599 aaPredicted RBP20.45■□□□□ 0.86
PRKCB-210ENST00000498739 SPDYE2Q495Y8 402 aa20.45■□□□□ 0.86
PRKCB-210ENST00000498739 APOBEC3HQ6NTF7 200 aaKnown RBP20.45■□□□□ 0.86
PRKCB-210ENST00000498739 SLF2Q8IX21 1173 aa20.45■□□□□ 0.86
PRKCB-210ENST00000498739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.45■□□□□ 0.86
PRKCB-210ENST00000498739 ECM29Q5VYK3 1845 aa20.45■□□□□ 0.86
PRKCB-210ENST00000498739 AKAP11Q9UKA4 1901 aa20.45■□□□□ 0.86
PRKCB-210ENST00000498739 NSUN4Q96CB9 384 aaKnown RBP20.44■□□□□ 0.86
PRKCB-210ENST00000498739 CDCA5Q96FF9 252 aa20.44■□□□□ 0.86
PRKCB-210ENST00000498739 DNAJC2Q99543 621 aaKnown RBP20.44■□□□□ 0.86
PRKCB-210ENST00000498739 PIH1D3Q9NQM4 214 aaKnown RBP20.44■□□□□ 0.86
PRKCB-210ENST00000498739 ATP5JP18859 108 aa20.43■□□□□ 0.86
PRKCB-210ENST00000498739 GSTO1P78417 241 aa20.43■□□□□ 0.86
PRKCB-210ENST00000498739 PRAMEF18Q5VWM3 479 aa20.43■□□□□ 0.86
PRKCB-210ENST00000498739 CST9Q5W186 159 aa20.43■□□□□ 0.86
PRKCB-210ENST00000498739 GPATCH3Q96I76 525 aa20.43■□□□□ 0.86
PRKCB-210ENST00000498739 BOLA2Q9H3K6 86 aa20.43■□□□□ 0.86
PRKCB-210ENST00000498739 ANTXR1Q9H6X2 564 aa20.43■□□□□ 0.86
PRKCB-210ENST00000498739 CREBZFQ9NS37 354 aa20.43■□□□□ 0.86
PRKCB-210ENST00000498739 CACNB3P54284 484 aa20.42■□□□□ 0.86
PRKCB-210ENST00000498739 SMC5Q8IY18 1101 aa20.42■□□□□ 0.86
PRKCB-210ENST00000498739 ZNF384Q8TF68 577 aa20.42■□□□□ 0.86
PRKCB-210ENST00000498739 DEFB129Q9H1M3 183 aa20.42■□□□□ 0.86
PRKCB-210ENST00000498739 ECHDC1Q9NTX5 307 aa20.42■□□□□ 0.86
PRKCB-210ENST00000498739 TMOD2Q9NZR1 351 aa20.42■□□□□ 0.86
PRKCB-210ENST00000498739 MROH7-TTC4A0A0A0MT08 1334 aa20.42■□□□□ 0.86
PRKCB-210ENST00000498739 GAKO14976 1311 aa20.42■□□□□ 0.86
PRKCB-210ENST00000498739 TCP10L2B9ZVM9 353 aa20.41■□□□□ 0.86
PRKCB-210ENST00000498739 IDH1O75874 414 aaKnown RBP20.41■□□□□ 0.86
PRKCB-210ENST00000498739 LDHCP07864 332 aa20.41■□□□□ 0.86
PRKCB-210ENST00000498739 TNFAIP1Q13829 316 aa20.41■□□□□ 0.86
PRKCB-210ENST00000498739 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
PRKCB-210ENST00000498739 NAA16Q6N069 864 aaPredicted RBP20.41■□□□□ 0.86
PRKCB-210ENST00000498739 ABT1Q9ULW3 272 aaKnown RBP20.41■□□□□ 0.86
PRKCB-210ENST00000498739 MAST2Q6P0Q8 1798 aa20.41■□□□□ 0.86
PRKCB-210ENST00000498739 POLR2AP24928 1970 aaKnown RBP20.41■□□□□ 0.86
PRKCB-210ENST00000498739 GOLIM4O00461 696 aa20.4■□□□□ 0.86
PRKCB-210ENST00000498739 BTDP43251 543 aa20.4■□□□□ 0.86
PRKCB-210ENST00000498739 TNNI2P48788 182 aa20.4■□□□□ 0.86
PRKCB-210ENST00000498739 TTF1Q15361 905 aaPredicted RBP20.4■□□□□ 0.86
PRKCB-210ENST00000498739 TSHZ3Q63HK5 1081 aa20.4■□□□□ 0.86
PRKCB-210ENST00000498739 CDC42EP5Q6NZY7 148 aa20.4■□□□□ 0.86
PRKCB-210ENST00000498739 OTUD7AQ8TE49 926 aaPredicted RBP20.4■□□□□ 0.86
PRKCB-210ENST00000498739 FAM163AQ96GL9 167 aaPredicted RBP20.4■□□□□ 0.86
PRKCB-210ENST00000498739 USP40Q9NVE5 1235 aa20.4■□□□□ 0.86
PRKCB-210ENST00000498739 PPP2R3BQ9Y5P8 575 aa20.4■□□□□ 0.86
PRKCB-210ENST00000498739 TRPM7Q96QT4 1865 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms