RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 USP2O75604 605 aaPredicted RBP13.82□□□□□ -0.2
LSAMP-206ENST00000498645 IFIT1P09914 478 aaKnown RBP13.82□□□□□ -0.2
LSAMP-206ENST00000498645 PUM3Q15397 648 aaKnown RBP13.82□□□□□ -0.2
LSAMP-206ENST00000498645 CDAN1Q8IWY9 1227 aa13.82□□□□□ -0.2
LSAMP-206ENST00000498645 VGLL2Q8N8G2 317 aa13.82□□□□□ -0.2
LSAMP-206ENST00000498645 R3HDMLQ9H3Y0 253 aa13.82□□□□□ -0.2
LSAMP-206ENST00000498645 ALDH1A1P00352 501 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 UBTFL1P0CB47 393 aaPredicted RBP13.81□□□□□ -0.2
LSAMP-206ENST00000498645 ZBTB48P10074 688 aaPredicted RBP13.81□□□□□ -0.2
LSAMP-206ENST00000498645 TNNI2P48788 182 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 CACNB3P54284 484 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 IFNL1Q8IU54 200 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 ANKRD13AQ8IZ07 590 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 TBC1D22AQ8WUA7 517 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 TEKT1Q969V4 418 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 TMEM39BQ9GZU3 492 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 SIL1Q9H173 461 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 ELP3Q9H9T3 547 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 HPS5Q9UPZ3 1129 aa13.81□□□□□ -0.2
LSAMP-206ENST00000498645 EYA2O00167 538 aa13.8□□□□□ -0.2
LSAMP-206ENST00000498645 IGF2BP3O00425 579 aaKnown RBP eCLIP13.8□□□□□ -0.2
LSAMP-206ENST00000498645 FKTNO75072 461 aa13.8□□□□□ -0.2
LSAMP-206ENST00000498645 SLC5A1P13866 664 aa13.8□□□□□ -0.2
LSAMP-206ENST00000498645 NOB1Q9ULX3 412 aaKnown RBP13.8□□□□□ -0.2
LSAMP-206ENST00000498645 PDE4DIPQ5VU43 2346 aa13.79□□□□□ -0.2
LSAMP-206ENST00000498645 GJA5P36382 358 aa13.79□□□□□ -0.2
LSAMP-206ENST00000498645 RFX5P48382 616 aaPredicted RBP13.79□□□□□ -0.2
LSAMP-206ENST00000498645 INHBEP58166 350 aa13.79□□□□□ -0.2
LSAMP-206ENST00000498645 PKN2Q16513 984 aaKnown RBP13.79□□□□□ -0.2
LSAMP-206ENST00000498645 OPTNQ96CV9 577 aa13.79□□□□□ -0.2
LSAMP-206ENST00000498645 TMOD2Q9NZR1 351 aa13.79□□□□□ -0.2
LSAMP-206ENST00000498645 AK9Q5TCS8 1911 aa13.79□□□□□ -0.2
LSAMP-206ENST00000498645 UNCXA6NJT0 531 aa13.78□□□□□ -0.2
LSAMP-206ENST00000498645 FGFR2P21802 821 aa13.78□□□□□ -0.2
LSAMP-206ENST00000498645 NOM1Q5C9Z4 860 aaKnown RBP13.78□□□□□ -0.2
LSAMP-206ENST00000498645 OTUD7BQ6GQQ9 843 aa13.78□□□□□ -0.2
LSAMP-206ENST00000498645 TEPSINQ96N21 525 aa13.78□□□□□ -0.2
LSAMP-206ENST00000498645 CFHR5Q9BXR6 569 aa13.78□□□□□ -0.2
LSAMP-206ENST00000498645 LRRFIP2Q9Y608 721 aaKnown RBP13.78□□□□□ -0.2
LSAMP-206ENST00000498645 MAST3O60307 1309 aa13.78□□□□□ -0.2
LSAMP-206ENST00000498645 HDLBPQ00341 1268 aaKnown RBP13.77□□□□□ -0.21
LSAMP-206ENST00000498645 VGLL4Q14135 290 aa13.77□□□□□ -0.21
LSAMP-206ENST00000498645 ATP2B3Q16720 1220 aa13.77□□□□□ -0.21
LSAMP-206ENST00000498645 FBXO46Q6PJ61 603 aaPredicted RBP13.77□□□□□ -0.21
LSAMP-206ENST00000498645 ATG9AQ7Z3C6 839 aa13.77□□□□□ -0.21
LSAMP-206ENST00000498645 TRMT2AQ8IZ69 625 aaKnown RBP13.77□□□□□ -0.21
LSAMP-206ENST00000498645 CNKSR2Q8WXI2 1034 aa13.77□□□□□ -0.21
LSAMP-206ENST00000498645 LPIN2Q92539 896 aa13.77□□□□□ -0.21
LSAMP-206ENST00000498645 KIF16BQ96L93 1317 aa13.77□□□□□ -0.21
LSAMP-206ENST00000498645 API5Q9BZZ5 524 aaKnown RBP13.77□□□□□ -0.21
LSAMP-206ENST00000498645 CSADQ9Y600 493 aa13.77□□□□□ -0.21
LSAMP-206ENST00000498645 CT47B1P0C2W7 299 aaPredicted RBP13.76□□□□□ -0.21
LSAMP-206ENST00000498645 CRHR2Q13324 411 aa13.76□□□□□ -0.21
LSAMP-206ENST00000498645 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.76□□□□□ -0.21
LSAMP-206ENST00000498645 OTUD5Q96G74 571 aa13.76□□□□□ -0.21
LSAMP-206ENST00000498645 ZDHHC15Q96MV8 337 aa13.76□□□□□ -0.21
LSAMP-206ENST00000498645 CEP126Q9P2H0 1117 aa13.76□□□□□ -0.21
LSAMP-206ENST00000498645 PA2G4Q9UQ80 394 aaKnown RBP13.76□□□□□ -0.21
LSAMP-206ENST00000498645 TRIM17Q9Y577 477 aa13.76□□□□□ -0.21
LSAMP-206ENST00000498645 MAP3K9P80192 1104 aa13.75□□□□□ -0.21
LSAMP-206ENST00000498645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.75□□□□□ -0.21
LSAMP-206ENST00000498645 WDR66Q8TBY9 1149 aa13.75□□□□□ -0.21
LSAMP-206ENST00000498645 MEIS3Q99687 375 aa13.75□□□□□ -0.21
LSAMP-206ENST00000498645 PTPN18Q99952 460 aa13.75□□□□□ -0.21
LSAMP-206ENST00000498645 HTTP42858 3142 aa13.75□□□□□ -0.21
LSAMP-206ENST00000498645 CCL15-CCL14A0A0B4J2E2 113 aa13.74□□□□□ -0.21
LSAMP-206ENST00000498645 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
LSAMP-206ENST00000498645 CIAO1O76071 339 aa13.74□□□□□ -0.21
LSAMP-206ENST00000498645 DIXDC1Q155Q3 683 aa13.74□□□□□ -0.21
LSAMP-206ENST00000498645 CCL15Q16663 113 aa13.74□□□□□ -0.21
LSAMP-206ENST00000498645 APOBEC3HQ6NTF7 200 aaKnown RBP13.74□□□□□ -0.21
LSAMP-206ENST00000498645 CD99L2Q8TCZ2 262 aa13.74□□□□□ -0.21
LSAMP-206ENST00000498645 WRNIP1Q96S55 665 aa13.74□□□□□ -0.21
LSAMP-206ENST00000498645 GNL3LQ9NVN8 582 aaKnown RBP13.74□□□□□ -0.21
LSAMP-206ENST00000498645 HDAC5Q9UQL6 1122 aa13.74□□□□□ -0.21
LSAMP-206ENST00000498645 SUGT1Q9Y2Z0 365 aa13.74□□□□□ -0.21
LSAMP-206ENST00000498645 MYH2Q9UKX2 1941 aa13.73□□□□□ -0.21
LSAMP-206ENST00000498645 PRDX5P30044 214 aa13.73□□□□□ -0.21
LSAMP-206ENST00000498645 GTF2A2P52657 109 aa13.73□□□□□ -0.21
LSAMP-206ENST00000498645 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
LSAMP-206ENST00000498645 TCP10Q12799 353 aa13.73□□□□□ -0.21
LSAMP-206ENST00000498645 HHIPL2Q6UWX4 724 aa13.73□□□□□ -0.21
LSAMP-206ENST00000498645 OTOP1Q7RTM1 612 aa13.73□□□□□ -0.21
LSAMP-206ENST00000498645 BRI3BPQ8WY22 251 aa13.73□□□□□ -0.21
LSAMP-206ENST00000498645 ZKSCAN4Q969J2 545 aaPredicted RBP13.73□□□□□ -0.21
LSAMP-206ENST00000498645 ERO1AQ96HE7 468 aa13.73□□□□□ -0.21
LSAMP-206ENST00000498645 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
LSAMP-206ENST00000498645 TESPA1A2RU30 521 aaPredicted RBP13.72□□□□□ -0.21
LSAMP-206ENST00000498645 LDHBP07195 334 aaKnown RBP13.72□□□□□ -0.21
LSAMP-206ENST00000498645 ADORA1P30542 326 aa13.72□□□□□ -0.21
LSAMP-206ENST00000498645 IL15P40933 162 aaPredicted RBP13.72□□□□□ -0.21
LSAMP-206ENST00000498645 PHKA1P46020 1223 aa13.72□□□□□ -0.21
LSAMP-206ENST00000498645 TAF1CQ15572 869 aaPredicted RBP13.72□□□□□ -0.21
LSAMP-206ENST00000498645 DCAF15Q66K64 600 aa13.72□□□□□ -0.21
LSAMP-206ENST00000498645 MIGA2Q7L4E1 593 aa13.72□□□□□ -0.21
LSAMP-206ENST00000498645 FAM83AQ86UY5 434 aa13.72□□□□□ -0.21
LSAMP-206ENST00000498645 HOOK2Q96ED9 719 aa13.72□□□□□ -0.21
LSAMP-206ENST00000498645 MRIQ9BWK5 157 aa13.72□□□□□ -0.21
LSAMP-206ENST00000498645 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
LSAMP-206ENST00000498645 DAGLAQ9Y4D2 1042 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms