RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 SEC62Q99442 399 aaKnown RBP13.25□□□□□ -0.29
PBX1-211ENST00000498497 PSMD1Q99460 953 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 LMCD1Q9NZU5 365 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 TRIM68Q6AZZ1 485 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 RSRC1Q96IZ7 334 aaKnown RBP13.24□□□□□ -0.29
PBX1-211ENST00000498497 HDAC6Q9UBN7 1215 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 ZNF232Q9UNY5 417 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 CCP110O43303 1012 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 LAMB3Q13751 1172 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 C1QTNF12Q5T7M4 302 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 HHATQ5VTY9 493 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 OTUD7BQ6GQQ9 843 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 SLC35F6Q8N357 371 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 NLRP3Q96P20 1036 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 STK31Q9BXU1 1019 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 GBP3Q9H0R5 595 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 PPANQ9NQ55 473 aaKnown RBP13.24□□□□□ -0.29
PBX1-211ENST00000498497 TPX2Q9ULW0 747 aaKnown RBP13.24□□□□□ -0.29
PBX1-211ENST00000498497 TFR2Q9UP52 801 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 HGSO14964 777 aaPredicted RBP13.24□□□□□ -0.29
PBX1-211ENST00000498497 HPDP32754 393 aaPredicted RBP13.24□□□□□ -0.29
PBX1-211ENST00000498497 SPRED3Q2MJR0 410 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 GPIHBP1Q8IV16 184 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 KIFC2Q96AC6 838 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 IL17RAQ96F46 866 aa13.24□□□□□ -0.29
PBX1-211ENST00000498497 POLR3DP05423 398 aaPredicted RBP13.23□□□□□ -0.29
PBX1-211ENST00000498497 B4GALNT2Q8NHY0 566 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 TSGA10Q9BZW7 698 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 GOLGA6BA6NDN3 693 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 MEFVO15553 781 aaPredicted RBP13.23□□□□□ -0.29
PBX1-211ENST00000498497 KIF5CO60282 957 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 POLD1P28340 1107 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 FNTAP49354 379 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 TRAF1Q13077 416 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 PARP9Q8IXQ6 854 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 TRMT44Q8IYL2 757 aaKnown RBP13.23□□□□□ -0.29
PBX1-211ENST00000498497 KLHL23Q8NBE8 558 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 STAG1Q8WVM7 1258 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 TCP11Q8WWU5 503 aa13.23□□□□□ -0.29
PBX1-211ENST00000498497 RRP36Q96EU6 259 aaKnown RBP13.23□□□□□ -0.29
PBX1-211ENST00000498497 IMPACTQ9P2X3 320 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 ABCC4O15439 1325 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 TRPM1Q7Z4N2 1603 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 SGSM2O43147 1006 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 CLTAP09496 248 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 SND1Q7KZF4 910 aaKnown RBP eCLIP13.22□□□□□ -0.29
PBX1-211ENST00000498497 FAM228AQ86W67 206 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 RAB11FIP4Q86YS3 637 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 RPAP2Q8IXW5 612 aaPredicted RBP13.22□□□□□ -0.29
PBX1-211ENST00000498497 PSMB7Q99436 277 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 HPCAL4Q9UM19 191 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 hCG_2014768A0A024R1R8 64 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 EIF3HO15372 352 aaKnown RBP eCLIP13.22□□□□□ -0.29
PBX1-211ENST00000498497 PECAM1P16284 738 aaPredicted RBP13.22□□□□□ -0.29
PBX1-211ENST00000498497 RAB27AP51159 221 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 NDUFA8P51970 172 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 HDLBPQ00341 1268 aaKnown RBP13.22□□□□□ -0.29
PBX1-211ENST00000498497 PSME1Q06323 249 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 TMEM62Q0P6H9 643 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 AKNAD1Q5T1N1 836 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 CYB5D1Q6P9G0 228 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 Q6ZUG5 572 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 ACRBPQ8NEB7 543 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 MYO6Q9UM54 1294 aa13.22□□□□□ -0.29
PBX1-211ENST00000498497 COBLO75128 1261 aa13.21□□□□□ -0.29
PBX1-211ENST00000498497 PLEKHF1Q96S99 279 aa13.21□□□□□ -0.29
PBX1-211ENST00000498497 RUFY1Q96T51 708 aa13.21□□□□□ -0.29
PBX1-211ENST00000498497 FCHSD2O94868 740 aa13.21□□□□□ -0.3
PBX1-211ENST00000498497 PRPF6O94906 941 aaKnown RBP13.21□□□□□ -0.3
PBX1-211ENST00000498497 SLC4A2P04920 1241 aa13.21□□□□□ -0.3
PBX1-211ENST00000498497 ARL8AQ96BM9 186 aa13.21□□□□□ -0.3
PBX1-211ENST00000498497 SLC39A2Q9NP94 309 aa13.21□□□□□ -0.3
PBX1-211ENST00000498497 CDC23Q9UJX2 597 aa13.21□□□□□ -0.3
PBX1-211ENST00000498497 IQSEC2Q5JU85 1478 aa13.2□□□□□ -0.3
PBX1-211ENST00000498497 E7EVH7 732 aa13.2□□□□□ -0.3
PBX1-211ENST00000498497 KCNV2Q8TDN2 545 aa13.2□□□□□ -0.3
PBX1-211ENST00000498497 KDM4CQ9H3R0 1056 aa13.2□□□□□ -0.3
PBX1-211ENST00000498497 SAMD9Q5K651 1589 aa13.2□□□□□ -0.3
PBX1-211ENST00000498497 ARHGAP6O43182 974 aa13.2□□□□□ -0.3
PBX1-211ENST00000498497 SMIM24O75264 130 aa13.2□□□□□ -0.3
PBX1-211ENST00000498497 MAGEA10P43363 369 aaPredicted RBP13.2□□□□□ -0.3
PBX1-211ENST00000498497 RBM43Q6ZSC3 357 aaKnown RBP13.2□□□□□ -0.3
PBX1-211ENST00000498497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
PBX1-211ENST00000498497 TRIM10Q9UDY6 481 aa13.2□□□□□ -0.3
PBX1-211ENST00000498497 CTAGE9A4FU28 777 aa13.19□□□□□ -0.3
PBX1-211ENST00000498497 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
PBX1-211ENST00000498497 PDCP20941 246 aa13.19□□□□□ -0.3
PBX1-211ENST00000498497 DNA2P51530 1060 aa13.19□□□□□ -0.3
PBX1-211ENST00000498497 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
PBX1-211ENST00000498497 SYCP3Q8IZU3 236 aa13.19□□□□□ -0.3
PBX1-211ENST00000498497 CCDC148Q8NFR7 591 aa13.19□□□□□ -0.3
PBX1-211ENST00000498497 SMARCC2Q8TAQ2 1214 aa13.19□□□□□ -0.3
PBX1-211ENST00000498497 MTRQ99707 1265 aa13.19□□□□□ -0.3
PBX1-211ENST00000498497 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
PBX1-211ENST00000498497 KRT14P02533 472 aa13.19□□□□□ -0.3
PBX1-211ENST00000498497 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
PBX1-211ENST00000498497 MARCKSP29966 332 aaPredicted RBP13.19□□□□□ -0.3
PBX1-211ENST00000498497 SLC7A5Q01650 507 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms