RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 IMPDH2P12268 514 aa11.45□□□□□ -0.58
SNX13-212ENST00000498463 CLCQ05315 142 aa11.45□□□□□ -0.58
SNX13-212ENST00000498463 IFFO2Q5TF58 517 aa11.45□□□□□ -0.58
SNX13-212ENST00000498463 STRN4Q9NRL3 753 aa11.45□□□□□ -0.58
SNX13-212ENST00000498463 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
SNX13-212ENST00000498463 PDE2AO00408 941 aaPredicted RBP11.44□□□□□ -0.58
SNX13-212ENST00000498463 GJB6O95452 261 aa11.44□□□□□ -0.58
SNX13-212ENST00000498463 S100BP04271 92 aaPredicted RBP11.44□□□□□ -0.58
SNX13-212ENST00000498463 MASP1P48740 699 aa11.44□□□□□ -0.58
SNX13-212ENST00000498463 LBRQ14739 615 aaKnown RBP11.44□□□□□ -0.58
SNX13-212ENST00000498463 DHX32Q7L7V1 743 aaKnown RBP11.44□□□□□ -0.58
SNX13-212ENST00000498463 RBBP8NLQ8NC74 664 aaPredicted RBP11.44□□□□□ -0.58
SNX13-212ENST00000498463 THAP3Q8WTV1 239 aaPredicted RBP11.44□□□□□ -0.58
SNX13-212ENST00000498463 CHPF2Q9P2E5 772 aa11.44□□□□□ -0.58
SNX13-212ENST00000498463 SAMM50Q9Y512 469 aa11.44□□□□□ -0.58
SNX13-212ENST00000498463 PCDHGC4Q9Y5F7 938 aa11.44□□□□□ -0.58
SNX13-212ENST00000498463 ZNF157P51786 506 aaPredicted RBP11.43□□□□□ -0.58
SNX13-212ENST00000498463 CASP7P55210 303 aa11.43□□□□□ -0.58
SNX13-212ENST00000498463 PPP2R3AQ06190 1150 aa11.43□□□□□ -0.58
SNX13-212ENST00000498463 SPEM2Q0P670 501 aa11.43□□□□□ -0.58
SNX13-212ENST00000498463 LAMC2Q13753 1193 aa11.43□□□□□ -0.58
SNX13-212ENST00000498463 JMYQ8N9B5 988 aa11.43□□□□□ -0.58
SNX13-212ENST00000498463 BPNT1O95861 308 aa11.42□□□□□ -0.58
SNX13-212ENST00000498463 THBS1P07996 1170 aa11.42□□□□□ -0.58
SNX13-212ENST00000498463 BMP6P22004 513 aa11.42□□□□□ -0.58
SNX13-212ENST00000498463 TNP2Q05952 138 aa11.42□□□□□ -0.58
SNX13-212ENST00000498463 MUC3BQ9H195 1237 aa11.42□□□□□ -0.58
SNX13-212ENST00000498463 EFCC1Q9HA90 598 aa11.42□□□□□ -0.58
SNX13-212ENST00000498463 DIAPH1O60610 1272 aaKnown RBP11.41□□□□□ -0.58
SNX13-212ENST00000498463 HCLS1P14317 486 aaPredicted RBP11.41□□□□□ -0.58
SNX13-212ENST00000498463 NRLP54845 237 aa11.41□□□□□ -0.58
SNX13-212ENST00000498463 PPP2R5EQ16537 467 aa11.41□□□□□ -0.58
SNX13-212ENST00000498463 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
SNX13-212ENST00000498463 TRIM67Q6ZTA4 783 aa11.41□□□□□ -0.58
SNX13-212ENST00000498463 RAB44Q7Z6P3 723 aaPredicted RBP11.41□□□□□ -0.58
SNX13-212ENST00000498463 BHMTQ93088 406 aa11.41□□□□□ -0.58
SNX13-212ENST00000498463 TYW1Q9NV66 732 aaKnown RBP11.41□□□□□ -0.58
SNX13-212ENST00000498463 PFDN2Q9UHV9 154 aa11.41□□□□□ -0.58
SNX13-212ENST00000498463 CYP8B1Q9UNU6 501 aa11.41□□□□□ -0.58
SNX13-212ENST00000498463 PTCH2Q9Y6C5 1203 aa11.41□□□□□ -0.58
SNX13-212ENST00000498463 VIL1P09327 827 aaKnown RBP11.4□□□□□ -0.58
SNX13-212ENST00000498463 MAPTP10636 758 aaKnown RBP11.4□□□□□ -0.58
SNX13-212ENST00000498463 NME2P22392 152 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 PRR20EP86478 221 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 PRR20CP86479 221 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 PRR20DP86480 221 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 PRR20BP86481 221 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 PRR20AP86496 221 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 SCARF1Q14162 830 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 HSP90AB2PQ58FF8 381 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 CERS3Q8IU89 383 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 GAL3ST3Q96A11 431 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 PBX4Q9BYU1 374 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 RASSF4Q9H2L5 321 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 HCN2Q9UL51 889 aa11.4□□□□□ -0.58
SNX13-212ENST00000498463 G3BP2Q9UN86 482 aaKnown RBP11.4□□□□□ -0.58
SNX13-212ENST00000498463 KDM2BQ8NHM5 1336 aa11.39□□□□□ -0.59
SNX13-212ENST00000498463 B2RBV5 119 aa11.39□□□□□ -0.59
SNX13-212ENST00000498463 DDAH1O94760 285 aa11.39□□□□□ -0.59
SNX13-212ENST00000498463 PDGFRBP09619 1106 aa11.39□□□□□ -0.59
SNX13-212ENST00000498463 ATP11AP98196 1134 aa11.39□□□□□ -0.59
SNX13-212ENST00000498463 TCEA2Q15560 299 aa11.39□□□□□ -0.59
SNX13-212ENST00000498463 SPATC1Q76KD6 591 aa11.39□□□□□ -0.59
SNX13-212ENST00000498463 C19orf47Q8N9M1 422 aaKnown RBP11.39□□□□□ -0.59
SNX13-212ENST00000498463 SLC30A3Q99726 388 aa11.39□□□□□ -0.59
SNX13-212ENST00000498463 CLEC4MQ9H2X3 399 aaPredicted RBP11.39□□□□□ -0.59
SNX13-212ENST00000498463 EHMT1Q9H9B1 1298 aa11.39□□□□□ -0.59
SNX13-212ENST00000498463 PCDHB14Q9Y5E9 798 aa11.39□□□□□ -0.59
SNX13-212ENST00000498463 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
SNX13-212ENST00000498463 UBAP2LQ14157 1087 aaKnown RBP11.38□□□□□ -0.59
SNX13-212ENST00000498463 LLGL2Q6P1M3 1020 aa11.38□□□□□ -0.59
SNX13-212ENST00000498463 SULF2Q8IWU5 870 aa11.38□□□□□ -0.59
SNX13-212ENST00000498463 SLC52A1Q9NWF4 448 aa11.38□□□□□ -0.59
SNX13-212ENST00000498463 MARK1Q9P0L2 795 aa11.38□□□□□ -0.59
SNX13-212ENST00000498463 FAN1Q9Y2M0 1017 aa11.38□□□□□ -0.59
SNX13-212ENST00000498463 BMP1P13497 986 aa11.37□□□□□ -0.59
SNX13-212ENST00000498463 GPLD1P80108 840 aa11.37□□□□□ -0.59
SNX13-212ENST00000498463 SSRP1Q08945 709 aaKnown RBP11.37□□□□□ -0.59
SNX13-212ENST00000498463 LRRC14Q15048 493 aa11.37□□□□□ -0.59
SNX13-212ENST00000498463 C6orf15Q6UXA7 325 aaPredicted RBP11.37□□□□□ -0.59
SNX13-212ENST00000498463 RUFY4Q6ZNE9 571 aa11.37□□□□□ -0.59
SNX13-212ENST00000498463 ST13P5Q8NFI4 369 aaPredicted RBP11.37□□□□□ -0.59
SNX13-212ENST00000498463 STK35Q8TDR2 534 aa11.37□□□□□ -0.59
SNX13-212ENST00000498463 ZMYM5Q9UJ78 669 aa11.37□□□□□ -0.59
SNX13-212ENST00000498463 DNMT3LQ9UJW3 386 aa11.37□□□□□ -0.59
SNX13-212ENST00000498463 POLR3KQ9Y2Y1 108 aaPredicted RBP11.37□□□□□ -0.59
SNX13-212ENST00000498463 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
SNX13-212ENST00000498463 ASMTLO95671 621 aa11.36□□□□□ -0.59
SNX13-212ENST00000498463 B3GALT4O96024 378 aa11.36□□□□□ -0.59
SNX13-212ENST00000498463 SIK1P57059 783 aa11.36□□□□□ -0.59
SNX13-212ENST00000498463 MLLT1Q03111 559 aaPredicted RBP11.36□□□□□ -0.59
SNX13-212ENST00000498463 PCDH1Q08174 1060 aa11.36□□□□□ -0.59
SNX13-212ENST00000498463 DALRD3Q5D0E6 543 aaKnown RBP11.36□□□□□ -0.59
SNX13-212ENST00000498463 SYNPOQ8N3V7 929 aa11.36□□□□□ -0.59
SNX13-212ENST00000498463 GRIN3AQ8TCU5 1115 aa11.36□□□□□ -0.59
SNX13-212ENST00000498463 CD2APQ9Y5K6 639 aa11.36□□□□□ -0.59
SNX13-212ENST00000498463 J3QW42 95 aa11.35□□□□□ -0.59
SNX13-212ENST00000498463 RPL6Q02878 288 aaKnown RBP11.35□□□□□ -0.59
SNX13-212ENST00000498463 RIPOR1Q6ZS17 1223 aa11.35□□□□□ -0.59
SNX13-212ENST00000498463 FAM178BQ8IXR5 827 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms