RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 NXPE3Q969Y0 559 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 ANAPC16Q96DE5 110 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 PBX4Q9BYU1 374 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 CEP44Q9C0F1 390 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 ZNF576Q9H609 170 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 LRRC4BQ9NT99 713 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 DNAJB12Q9NXW2 375 aaKnown RBP5.46□□□□□ -1.54
CALD1-224ENST00000498254 SUPT16HQ9Y5B9 1047 aaKnown RBP5.46□□□□□ -1.54
CALD1-224ENST00000498254 RLBP1P12271 317 aa5.45□□□□□ -1.54
CALD1-224ENST00000498254 LMNB1P20700 586 aa5.45□□□□□ -1.54
CALD1-224ENST00000498254 ITPKAP23677 461 aa5.45□□□□□ -1.54
CALD1-224ENST00000498254 ETFBP38117 255 aa5.45□□□□□ -1.54
CALD1-224ENST00000498254 CRKP46108 304 aa5.45□□□□□ -1.54
CALD1-224ENST00000498254 PCBP4P57723 403 aaKnown RBP5.45□□□□□ -1.54
CALD1-224ENST00000498254 APOBRQ0VD83 1088 aa5.45□□□□□ -1.54
CALD1-224ENST00000498254 TMEM102Q8N9M5 508 aaPredicted RBP5.45□□□□□ -1.54
CALD1-224ENST00000498254 FBXO27Q8NI29 283 aa5.45□□□□□ -1.54
CALD1-224ENST00000498254 JARID2Q92833 1246 aaPredicted RBP5.45□□□□□ -1.54
CALD1-224ENST00000498254 SEC16BQ96JE7 1060 aa5.45□□□□□ -1.54
CALD1-224ENST00000498254 NECAB3Q96P71 396 aaPredicted RBP5.45□□□□□ -1.54
CALD1-224ENST00000498254 BHLHE41Q9C0J9 482 aaPredicted RBP5.45□□□□□ -1.54
CALD1-224ENST00000498254 LACRTQ9GZZ8 138 aa5.45□□□□□ -1.54
CALD1-224ENST00000498254 TMA7Q9Y2S6 64 aaKnown RBP5.45□□□□□ -1.54
CALD1-224ENST00000498254 PCDHB5Q9Y5E4 795 aa5.45□□□□□ -1.54
CALD1-224ENST00000498254 CCDC85CA6NKD9 419 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 HMGB1P09429 215 aaKnown RBP5.44□□□□□ -1.54
CALD1-224ENST00000498254 FURINP09958 794 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 GARTP22102 1010 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 LMNB2Q03252 620 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 SEPT6Q14141 434 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 SEZ6Q53EL9 994 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 RASIP1Q5U651 963 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 ADAMTSL4Q6UY14 1074 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 BNC2Q6ZN30 1099 aaPredicted RBP5.44□□□□□ -1.54
CALD1-224ENST00000498254 ANKS3Q6ZW76 656 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 NOP9Q86U38 636 aaKnown RBP5.44□□□□□ -1.54
CALD1-224ENST00000498254 FAM35AQ86V20 835 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 MICALL1Q8N3F8 863 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 TRPM4Q8TD43 1214 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 HNRNPLLQ8WVV9 542 aaKnown RBP5.44□□□□□ -1.54
CALD1-224ENST00000498254 NKD1Q969G9 470 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 ACDQ96AP0 544 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 TRERF1Q96PN7 1200 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 POP1Q99575 1024 aaKnown RBP5.44□□□□□ -1.54
CALD1-224ENST00000498254 RBSNQ9H1K0 784 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 PPT2Q9UMR5 302 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 PHF24Q9UPV7 400 aa5.44□□□□□ -1.54
CALD1-224ENST00000498254 SCO2A0A1W2PP80 73 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 PPM1GO15355 546 aaPredicted RBP5.43□□□□□ -1.54
CALD1-224ENST00000498254 SMNDC1O75940 238 aaKnown RBP eCLIP5.43□□□□□ -1.54
CALD1-224ENST00000498254 F13A1P00488 732 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 BMP4P12644 408 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 HOXD8P13378 290 aaPredicted RBP5.43□□□□□ -1.54
CALD1-224ENST00000498254 CDC25BP30305 580 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 MCM4P33991 863 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 ZMYM1Q5SVZ6 1142 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 SOGA3Q5TF21 947 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 FBXW10Q5XX13 1052 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 AGMOQ6ZNB7 445 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 ZNF662Q6ZS27 426 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 ANKRD24Q8TF21 1146 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 PLD4Q96BZ4 506 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 NT5C1AQ9BXI3 368 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 TRIM55Q9BYV6 548 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 EFCC1Q9HA90 598 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 ZFYVE1Q9HBF4 777 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 CBX8Q9HC52 389 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 TMEM39AQ9NV64 488 aa5.43□□□□□ -1.54
CALD1-224ENST00000498254 CADPSQ9ULU8 1353 aa5.42□□□□□ -1.54
CALD1-224ENST00000498254 ARID1BQ8NFD5 2236 aaPredicted RBP5.42□□□□□ -1.54
CALD1-224ENST00000498254 ANKRD62A6NC57 917 aa5.42□□□□□ -1.54
CALD1-224ENST00000498254 C2CD2LO14523 706 aa5.42□□□□□ -1.54
CALD1-224ENST00000498254 PCDH1Q08174 1060 aa5.42□□□□□ -1.54
CALD1-224ENST00000498254 JAZF1Q86VZ6 243 aa5.42□□□□□ -1.54
CALD1-224ENST00000498254 STK35Q8TDR2 534 aa5.42□□□□□ -1.54
CALD1-224ENST00000498254 BSNDQ8WZ55 320 aa5.42□□□□□ -1.54
CALD1-224ENST00000498254 SMG9Q9H0W8 520 aaKnown RBP5.42□□□□□ -1.54
CALD1-224ENST00000498254 MIR1-1HGQ9H1L0 117 aa5.42□□□□□ -1.54
CALD1-224ENST00000498254 CLEC4MQ9H2X3 399 aaPredicted RBP5.42□□□□□ -1.54
CALD1-224ENST00000498254 SH2B1Q9NRF2 756 aaPredicted RBP5.42□□□□□ -1.54
CALD1-224ENST00000498254 NAGPAQ9UK23 515 aa5.42□□□□□ -1.54
CALD1-224ENST00000498254 NSFL1CQ9UNZ2 370 aaKnown RBP5.42□□□□□ -1.54
CALD1-224ENST00000498254 TRIM33Q9UPN9 1127 aa5.42□□□□□ -1.54
CALD1-224ENST00000498254 CDK11AQ9UQ88 783 aaPredicted RBP5.42□□□□□ -1.54
CALD1-224ENST00000498254 TLDC2A0PJX2 215 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 GREM1O60565 184 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 MX2P20592 715 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 CDK11BP21127 795 aaKnown RBP5.41□□□□□ -1.54
CALD1-224ENST00000498254 CANXP27824 592 aaKnown RBP5.41□□□□□ -1.54
CALD1-224ENST00000498254 SOX9P48436 509 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 PPP2R3AQ06190 1150 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 PERM1Q5SV97 790 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 FAM182BQ5T319 152 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 ZNF468Q5VIY5 522 aaPredicted RBP5.41□□□□□ -1.54
CALD1-224ENST00000498254 SDE2Q6IQ49 451 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 GDF6Q6KF10 455 aaPredicted RBP5.41□□□□□ -1.54
CALD1-224ENST00000498254 ELMSAN1Q6PJG2 1045 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 FAM196AQ6ZSG2 479 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 NBPF11Q86T75 865 aa5.41□□□□□ -1.54
CALD1-224ENST00000498254 SULF2Q8IWU5 870 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms