RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 GLI3P10071 1580 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 TRPM3Q9HCF6 1732 aaPredicted RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 CAPN5O15484 640 aaPredicted RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 SART1O43290 800 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 APBA3O96018 575 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 CRHR2Q13324 411 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 C8orf34Q49A92 452 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 RC3H1Q5TC82 1133 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 FAM196AQ6ZSG2 479 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 USP53Q70EK8 1073 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 CYP2U1Q7Z449 544 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 RNF168Q8IYW5 571 aaPredicted RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 FERMT2Q96AC1 680 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 RUFY1Q96T51 708 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 HNRNPABQ99729 332 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 ANGPTL2Q9UKU9 493 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 FAF1Q9UNN5 650 aaPredicted RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 ARID1BQ8NFD5 2236 aaPredicted RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 FKTNO75072 461 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 WEE2P0C1S8 567 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 CD1EP15812 388 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 CANXP27824 592 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 OXTRP30559 389 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 CCR10P46092 362 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 LBRQ14739 615 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 TMEM31Q5JXX7 168 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 NUTM2GQ5VZR2 741 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 CRIPAKQ8N1N5 446 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 FBXO18Q8NFZ0 1043 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 SLC10A4Q96EP9 437 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 ESYT1Q9BSJ8 1104 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 IFIH1Q9BYX4 1025 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 CCSER1Q9C0I3 900 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 RTN4Q9NQC3 1192 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 IRF6O14896 467 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 SEMA3EO15041 775 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 ERN1O75460 977 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 INPP5BP32019 993 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 MMP16P51512 607 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 ARSDP51689 593 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 ZNF445P59923 1031 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 PDE4CQ08493 712 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 TXNDC11Q6PKC3 985 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 METTL3Q86U44 580 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 CCDC71Q8IV32 467 aaPredicted RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 TMEM151AQ8N4L1 468 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 GIMAP7Q8NHV1 300 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 SMAD5Q99717 465 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 TMEM121Q9BTD3 319 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 KRTAP4-8Q9BYQ9 185 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 C12orf65Q9H3J6 166 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 GNL3LQ9NVN8 582 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 STK32BQ9NY57 414 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 CYP46A1Q9Y6A2 500 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 NRXN3Q9Y4C0 1643 aa1.78□□□□□ -2.13
XRN1-214ENST00000498077 SH3TC1Q8TE82 1336 aa1.78□□□□□ -2.13
XRN1-214ENST00000498077 RNF223E7ERA6 249 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 MEN1O00255 615 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 USP12O75317 370 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 FSHBP01225 129 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 FOSL1P15407 271 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 CD46P15529 392 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 RAB6AP20340 208 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 MAP2K3P46734 347 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 CTDSPL2Q05D32 466 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 GALNT15Q8N3T1 639 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 ASAP3Q8TDY4 903 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 NUDT8Q8WV74 236 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 NACC1Q96RE7 527 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 BHLHE41Q9C0J9 482 aaPredicted RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 XPO5Q9HAV4 1204 aaKnown RBP eCLIP1.77□□□□□ -2.13
XRN1-214ENST00000498077 CROTQ9UKG9 612 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 FCF1Q9Y324 198 aaKnown RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 BUB1BO60566 1050 aaPredicted RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 MAOBP27338 520 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 BMP8BP34820 402 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 MAGEA4P43358 317 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 MTTPP55157 894 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 STIM1Q13586 685 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 CCDC6Q16204 474 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 KCNT1Q5JUK3 1230 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 MACC1Q6ZN28 852 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 CNTROBQ8N137 903 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 MED8Q96G25 268 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 LBHD1Q9BQE6 289 aaPredicted RBP1.77□□□□□ -2.13
XRN1-214ENST00000498077 FHOD1Q9Y613 1164 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 PLA2G2AP14555 144 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 GPX6P59796 221 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 MB21D1Q8N884 522 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 TMEM176AQ96HP8 235 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 ARHGAP9Q9BRR9 750 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 CDHR5Q9HBB8 845 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 SAGE1Q9NXZ1 904 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 AIPL1Q9NZN9 384 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 PLEKHM1Q9Y4G2 1056 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 CCDC18Q5T9S5 1454 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 IQCA1LA6NCM1 817 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 H7C1D1 291 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 RAD21O60216 631 aa1.77□□□□□ -2.13
XRN1-214ENST00000498077 KLF8O95600 359 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms