RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 TMEM63CQ9P1W3 806 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 HAND2P61296 217 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 PARP10Q53GL7 1025 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 ZNF589Q86UQ0 364 aaPredicted RBP9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 SLF2Q8IX21 1173 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 SDF4Q9BRK5 362 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 NAPBQ9H115 298 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 TPCN1Q9ULQ1 816 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 ZDHHC9Q9Y397 364 aa9.31□□□□□ -0.92
HLA-DMB-262ENST00000498020 SH3TC1Q8TE82 1336 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 SMCR8Q8TEV9 937 aaPredicted RBP9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 ISCA1Q9BUE6 129 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 IL25Q9H293 177 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 STRCQ7RTU9 1775 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 RAD17O75943 681 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 RFX5P48382 616 aaPredicted RBP9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 DOK7Q18PE1 504 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 SLC9C2Q5TAH2 1124 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 CCAR2Q8N163 923 aaKnown RBP9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 GPT2Q8TD30 523 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 SEC62Q99442 399 aaKnown RBP9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 MTMR6Q9Y217 621 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 CLCN1P35523 988 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 ME1P48163 572 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 FOXO4P98177 505 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 ZMYM1Q5SVZ6 1142 aa9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 PUS3Q9BZE2 481 aaKnown RBP9.3□□□□□ -0.92
HLA-DMB-262ENST00000498020 IL6STP40189 918 aaPredicted RBP9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 CTSWP56202 376 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 C8orf76Q96K31 380 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 RBSNQ9H1K0 784 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 CCDC69A6NI79 296 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 GOLGA8BA8MQT2 603 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 CRKLP46109 303 aaKnown RBP9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 HS1BP3Q53T59 392 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 PCMTD1Q96MG8 357 aaPredicted RBP9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 LDHCP07864 332 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 TNNI2P48788 182 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 JMYQ8N9B5 988 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 GGA1Q9UJY5 639 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 SOCS7O14512 581 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 GPS2Q13227 327 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 KIF22Q14807 665 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 SUPT20HQ8NEM7 779 aa9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 THRAP3Q9Y2W1 955 aaKnown RBP9.29□□□□□ -0.92
HLA-DMB-262ENST00000498020 APOBRQ0VD83 1088 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 GTF3C6Q969F1 213 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 SCLT1Q96NL6 688 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 ZBTB1Q9Y2K1 713 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 KLF18A0A0U1RQI7 1052 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 ERVV-1B6SEH8 477 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 CTAGE5O15320 804 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 GADD45BO75293 160 aaPredicted RBP9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 HSPD1P10809 573 aaKnown RBP9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 ATP2B1P20020 1258 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 ZAP70P43403 619 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 PUM3Q15397 648 aaKnown RBP9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 ZNF804AQ7Z570 1209 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 NLRP10Q86W26 655 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 NAT10Q9H0A0 1025 aaKnown RBP9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 ORC3Q9UBD5 711 aaPredicted RBP9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 PRC1O43663 620 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 HLA-DOAP06340 250 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 CYP21A2P08686 494 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 DLGAP5Q15398 846 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 TSGA10IPQ3SY00 556 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 LPIN2Q92539 896 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 IL17RAQ96F46 866 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 CHAMP1Q96JM3 812 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 TAOK3Q9H2K8 898 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 LTN1O94822 1766 aa9.28□□□□□ -0.92
HLA-DMB-262ENST00000498020 PTPDC1A2A3K4 754 aa9.27□□□□□ -0.92
HLA-DMB-262ENST00000498020 XBP1P17861 261 aa9.27□□□□□ -0.92
HLA-DMB-262ENST00000498020 GIMAP6Q6P9H5 292 aa9.27□□□□□ -0.92
HLA-DMB-262ENST00000498020 CACNA1FO60840 1977 aa9.27□□□□□ -0.92
HLA-DMB-262ENST00000498020 LARGE1O95461 756 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 CCDC96Q2M329 555 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 ATL3Q6DD88 541 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 KIAA0825Q8IV33 1275 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 RNF41Q9H4P4 317 aaPredicted RBP9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 MROH5Q6ZUA9 1318 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 COL15A1P39059 1388 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 E7EWF7 191 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 GPAA1O43292 621 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 PPP1R12BO60237 982 aaPredicted RBP9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 GUCY1B3Q02153 619 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 CAMK4Q16566 473 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 WASF1Q92558 559 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 KCNB2Q92953 911 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 TRIM5Q9C035 493 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 ALDH8A1Q9H2A2 487 aaPredicted RBP9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 WDR70Q9NW82 654 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 ATG9AQ7Z3C6 839 aa9.27□□□□□ -0.93
HLA-DMB-262ENST00000498020 BAG3O95817 575 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 SLC15A2Q16348 729 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 CDC37L1Q7L3B6 337 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 PPP1R9BQ96SB3 815 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms