RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 DUOX1Q9NRD9 1551 aa12.75□□□□□ -0.37
PTPRN-218ENST00000497977 MKRN1Q9UHC7 482 aaKnown RBP12.75□□□□□ -0.37
PTPRN-218ENST00000497977 SCN4AP35499 1836 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 LRRC37AA6NMS7 1700 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 COL4A1P02462 1669 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 PDS5AQ29RF7 1337 aaKnown RBP12.74□□□□□ -0.37
PTPRN-218ENST00000497977 SALL1Q9NSC2 1324 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 EGFRP00533 1210 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 HUNKP57058 714 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 TMED8Q6PL24 325 aaPredicted RBP12.74□□□□□ -0.37
PTPRN-218ENST00000497977 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 SAPCD2Q86UD0 394 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 CERS5Q8N5B7 392 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 JMYQ8N9B5 988 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 KIF1BPQ96EK5 621 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 CRBNQ96SW2 442 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 NOL10Q9BSC4 688 aaKnown RBP12.74□□□□□ -0.37
PTPRN-218ENST00000497977 DEFB129Q9H1M3 183 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 JAG2Q9Y219 1238 aa12.74□□□□□ -0.37
PTPRN-218ENST00000497977 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
PTPRN-218ENST00000497977 IFIT2P09913 472 aaKnown RBP12.73□□□□□ -0.37
PTPRN-218ENST00000497977 TNNI3KQ59H18 835 aa12.73□□□□□ -0.37
PTPRN-218ENST00000497977 DZIP1Q86YF9 867 aaKnown RBP12.73□□□□□ -0.37
PTPRN-218ENST00000497977 CDCA5Q96FF9 252 aa12.73□□□□□ -0.37
PTPRN-218ENST00000497977 PRMT6Q96LA8 375 aaPredicted RBP12.73□□□□□ -0.37
PTPRN-218ENST00000497977 ZDHHC15Q96MV8 337 aa12.73□□□□□ -0.37
PTPRN-218ENST00000497977 VEZTQ9HBM0 779 aa12.73□□□□□ -0.37
PTPRN-218ENST00000497977 ABCF2Q9UG63 623 aa12.73□□□□□ -0.37
PTPRN-218ENST00000497977 FPGT-TNNI3KV9GXZ4 949 aa12.73□□□□□ -0.37
PTPRN-218ENST00000497977 TIAM2Q8IVF5 1701 aa12.73□□□□□ -0.37
PTPRN-218ENST00000497977 A0A1B0GUL6 1792 aa12.72□□□□□ -0.37
PTPRN-218ENST00000497977 WDR33Q9C0J8 1336 aaKnown RBP12.72□□□□□ -0.37
PTPRN-218ENST00000497977 PHKA1P46020 1223 aa12.72□□□□□ -0.37
PTPRN-218ENST00000497977 ZNF157P51786 506 aaPredicted RBP12.72□□□□□ -0.37
PTPRN-218ENST00000497977 HTRA3P83110 453 aa12.72□□□□□ -0.37
PTPRN-218ENST00000497977 NOGQ13253 232 aa12.72□□□□□ -0.37
PTPRN-218ENST00000497977 FKBP1CQ5VVH2 108 aa12.72□□□□□ -0.37
PTPRN-218ENST00000497977 SPATA5Q8NB90 893 aa12.72□□□□□ -0.37
PTPRN-218ENST00000497977 ZBED3Q96IU2 234 aaPredicted RBP12.72□□□□□ -0.37
PTPRN-218ENST00000497977 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
PTPRN-218ENST00000497977 LRP2BPQ9P2M1 347 aa12.72□□□□□ -0.37
PTPRN-218ENST00000497977 DICER1Q9UPY3 1922 aaKnown RBP12.72□□□□□ -0.37
PTPRN-218ENST00000497977 CNTNAP1P78357 1384 aa12.71□□□□□ -0.37
PTPRN-218ENST00000497977 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
PTPRN-218ENST00000497977 BAG3O95817 575 aa12.71□□□□□ -0.37
PTPRN-218ENST00000497977 VEGFBP49765 207 aa12.71□□□□□ -0.37
PTPRN-218ENST00000497977 RGMBQ6NW40 437 aa12.71□□□□□ -0.37
PTPRN-218ENST00000497977 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
PTPRN-218ENST00000497977 CAPNS2Q96L46 248 aa12.71□□□□□ -0.37
PTPRN-218ENST00000497977 TDRD3Q9H7E2 651 aaKnown RBP12.71□□□□□ -0.37
PTPRN-218ENST00000497977 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
PTPRN-218ENST00000497977 CA12O43570 354 aa12.7□□□□□ -0.38
PTPRN-218ENST00000497977 IREB2P48200 963 aaKnown RBP12.7□□□□□ -0.38
PTPRN-218ENST00000497977 RASA3Q14644 834 aa12.7□□□□□ -0.38
PTPRN-218ENST00000497977 TTF1Q15361 905 aaPredicted RBP12.7□□□□□ -0.38
PTPRN-218ENST00000497977 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
PTPRN-218ENST00000497977 RHPN1Q8TCX5 695 aa12.7□□□□□ -0.38
PTPRN-218ENST00000497977 FAM163AQ96GL9 167 aaPredicted RBP12.7□□□□□ -0.38
PTPRN-218ENST00000497977 CLRN2A0PK11 232 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 NEFLP07196 543 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 ARID4AP29374 1257 aaPredicted RBP12.69□□□□□ -0.38
PTPRN-218ENST00000497977 ADORA1P30542 326 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 INHBEP58166 350 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 GRM1Q13255 1194 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 SPDYE2Q495Y8 402 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 SLC10A4Q96EP9 437 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 GPATCH3Q96I76 525 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 LRRCC1Q9C099 1032 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 USP40Q9NVE5 1235 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 RAI14Q9P0K7 980 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 HMG20BQ9P0W2 317 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 EXOC6BQ9Y2D4 811 aa12.69□□□□□ -0.38
PTPRN-218ENST00000497977 PLCG2P16885 1265 aa12.68□□□□□ -0.38
PTPRN-218ENST00000497977 RASGRF1Q13972 1273 aa12.68□□□□□ -0.38
PTPRN-218ENST00000497977 DCAF15Q66K64 600 aa12.68□□□□□ -0.38
PTPRN-218ENST00000497977 AACSQ86V21 672 aa12.68□□□□□ -0.38
PTPRN-218ENST00000497977 EXOC6Q8TAG9 804 aa12.68□□□□□ -0.38
PTPRN-218ENST00000497977 CCDC8Q9H0W5 538 aaPredicted RBP12.68□□□□□ -0.38
PTPRN-218ENST00000497977 ASTN2O75129 1339 aaPredicted RBP12.67□□□□□ -0.38
PTPRN-218ENST00000497977 TCP10L2B9ZVM9 353 aa12.67□□□□□ -0.38
PTPRN-218ENST00000497977 FMR1Q06787 632 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPRN-218ENST00000497977 MAP3K12Q12852 859 aa12.67□□□□□ -0.38
PTPRN-218ENST00000497977 CYP4F22Q6NT55 531 aa12.67□□□□□ -0.38
PTPRN-218ENST00000497977 APOBEC3HQ6NTF7 200 aaKnown RBP12.67□□□□□ -0.38
PTPRN-218ENST00000497977 FAM151AQ8WW52 585 aa12.67□□□□□ -0.38
PTPRN-218ENST00000497977 EAF2Q96CJ1 260 aaPredicted RBP12.67□□□□□ -0.38
PTPRN-218ENST00000497977 DBNDD2Q9BQY9 259 aa12.67□□□□□ -0.38
PTPRN-218ENST00000497977 COL1A1P02452 1464 aaPredicted RBP12.66□□□□□ -0.38
PTPRN-218ENST00000497977 LTBP1Q14766 1721 aa12.66□□□□□ -0.38
PTPRN-218ENST00000497977 APBB1O00213 710 aa12.66□□□□□ -0.38
PTPRN-218ENST00000497977 PRDX5P30044 214 aa12.66□□□□□ -0.38
PTPRN-218ENST00000497977 OTUD7BQ6GQQ9 843 aa12.66□□□□□ -0.38
PTPRN-218ENST00000497977 NAA16Q6N069 864 aaPredicted RBP12.66□□□□□ -0.38
PTPRN-218ENST00000497977 ANKRD13AQ8IZ07 590 aa12.66□□□□□ -0.38
PTPRN-218ENST00000497977 ANGEL1Q9UNK9 670 aaKnown RBP12.66□□□□□ -0.38
PTPRN-218ENST00000497977 CCDC88AQ3V6T2 1871 aa12.65□□□□□ -0.38
PTPRN-218ENST00000497977 UBE2Q2LH0YL09 131 aa12.65□□□□□ -0.38
PTPRN-218ENST00000497977 ENTPD3O75355 529 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms