RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 FRAT2O75474 233 aaPredicted RBP22.88■■□□□ 1.25
ATPAF2-209ENST00000497871 ALDH1L2Q3SY69 923 aa22.88■■□□□ 1.25
ATPAF2-209ENST00000497871 IQSEC3Q9UPP2 1182 aaPredicted RBP22.88■■□□□ 1.25
ATPAF2-209ENST00000497871 TNNI2P48788 182 aa22.87■■□□□ 1.25
ATPAF2-209ENST00000497871 FBXO46Q6PJ61 603 aaPredicted RBP22.87■■□□□ 1.25
ATPAF2-209ENST00000497871 KLHDC4Q8TBB5 520 aa22.87■■□□□ 1.25
ATPAF2-209ENST00000497871 TEPSINQ96N21 525 aa22.87■■□□□ 1.25
ATPAF2-209ENST00000497871 MRIQ9BWK5 157 aa22.87■■□□□ 1.25
ATPAF2-209ENST00000497871 IGF2BP3O00425 579 aaKnown RBP eCLIP22.86■■□□□ 1.25
ATPAF2-209ENST00000497871 BCAMP50895 628 aa22.86■■□□□ 1.25
ATPAF2-209ENST00000497871 CHAF1AQ13111 956 aaPredicted RBP22.86■■□□□ 1.25
ATPAF2-209ENST00000497871 GRIK5Q16478 980 aa22.86■■□□□ 1.25
ATPAF2-209ENST00000497871 OTUD7BQ6GQQ9 843 aa22.86■■□□□ 1.25
ATPAF2-209ENST00000497871 TCP10L2B9ZVM9 353 aa22.85■■□□□ 1.25
ATPAF2-209ENST00000497871 KIF16BQ96L93 1317 aa22.84■■□□□ 1.25
ATPAF2-209ENST00000497871 TESPA1A2RU30 521 aaPredicted RBP22.84■■□□□ 1.25
ATPAF2-209ENST00000497871 IFIT1P09914 478 aaKnown RBP22.84■■□□□ 1.25
ATPAF2-209ENST00000497871 FGFR2P21802 821 aa22.84■■□□□ 1.25
ATPAF2-209ENST00000497871 GJA5P36382 358 aa22.84■■□□□ 1.25
ATPAF2-209ENST00000497871 PUM3Q15397 648 aaKnown RBP22.84■■□□□ 1.25
ATPAF2-209ENST00000497871 TEKT1Q969V4 418 aa22.84■■□□□ 1.25
ATPAF2-209ENST00000497871 TMEM39BQ9GZU3 492 aa22.84■■□□□ 1.25
ATPAF2-209ENST00000497871 SUGT1Q9Y2Z0 365 aa22.84■■□□□ 1.25
ATPAF2-209ENST00000497871 ECM29Q5VYK3 1845 aa22.84■■□□□ 1.25
ATPAF2-209ENST00000497871 EYA2O00167 538 aa22.83■■□□□ 1.25
ATPAF2-209ENST00000497871 RFX5P48382 616 aaPredicted RBP22.83■■□□□ 1.25
ATPAF2-209ENST00000497871 CDCA7LQ96GN5 454 aa22.83■■□□□ 1.25
ATPAF2-209ENST00000497871 MAP3K9P80192 1104 aa22.82■■□□□ 1.24
ATPAF2-209ENST00000497871 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.82■■□□□ 1.24
ATPAF2-209ENST00000497871 CDAN1Q8IWY9 1227 aa22.82■■□□□ 1.24
ATPAF2-209ENST00000497871 TRMT2AQ8IZ69 625 aaKnown RBP22.82■■□□□ 1.24
ATPAF2-209ENST00000497871 OPTNQ96CV9 577 aa22.82■■□□□ 1.24
ATPAF2-209ENST00000497871 ELP3Q9H9T3 547 aa22.82■■□□□ 1.24
ATPAF2-209ENST00000497871 SMC4Q9NTJ3 1288 aa22.82■■□□□ 1.24
ATPAF2-209ENST00000497871 ZDHHC15Q96MV8 337 aa22.81■■□□□ 1.24
ATPAF2-209ENST00000497871 PTPN18Q99952 460 aa22.81■■□□□ 1.24
ATPAF2-209ENST00000497871 FKBP1CQ5VVH2 108 aa22.8■■□□□ 1.24
ATPAF2-209ENST00000497871 LPIN2Q92539 896 aa22.8■■□□□ 1.24
ATPAF2-209ENST00000497871 MAST3O60307 1309 aa22.8■■□□□ 1.24
ATPAF2-209ENST00000497871 CT47B1P0C2W7 299 aaPredicted RBP22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 SLC5A1P13866 664 aa22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 CRHR2Q13324 411 aa22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 APOBEC3HQ6NTF7 200 aaKnown RBP22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 HHIPL2Q6UWX4 724 aa22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 FAM83AQ86UY5 434 aa22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 ERO1AQ96HE7 468 aa22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 MS4A4AQ96JQ5 239 aa22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 TMOD2Q9NZR1 351 aa22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 FBXO3Q9UK99 471 aa22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 TRIM17Q9Y577 477 aa22.79■■□□□ 1.24
ATPAF2-209ENST00000497871 CACNB3P54284 484 aa22.78■■□□□ 1.24
ATPAF2-209ENST00000497871 ATG9AQ7Z3C6 839 aa22.78■■□□□ 1.24
ATPAF2-209ENST00000497871 WDR66Q8TBY9 1149 aa22.78■■□□□ 1.24
ATPAF2-209ENST00000497871 CSADQ9Y600 493 aa22.78■■□□□ 1.24
ATPAF2-209ENST00000497871 SLC34A2O95436 690 aa22.77■■□□□ 1.24
ATPAF2-209ENST00000497871 UBTFL1P0CB47 393 aaPredicted RBP22.77■■□□□ 1.24
ATPAF2-209ENST00000497871 VGLL4Q14135 290 aa22.77■■□□□ 1.24
ATPAF2-209ENST00000497871 OTOP1Q7RTM1 612 aa22.77■■□□□ 1.24
ATPAF2-209ENST00000497871 HOOK2Q96ED9 719 aa22.77■■□□□ 1.24
ATPAF2-209ENST00000497871 NOB1Q9ULX3 412 aaKnown RBP22.77■■□□□ 1.24
ATPAF2-209ENST00000497871 HDAC5Q9UQL6 1122 aa22.77■■□□□ 1.24
ATPAF2-209ENST00000497871 GTF2A2P52657 109 aa22.76■■□□□ 1.23
ATPAF2-209ENST00000497871 CNKSR2Q8WXI2 1034 aa22.76■■□□□ 1.23
ATPAF2-209ENST00000497871 TNRC18O15417 2968 aaPredicted RBP22.75■■□□□ 1.23
ATPAF2-209ENST00000497871 CIAO1O76071 339 aa22.75■■□□□ 1.23
ATPAF2-209ENST00000497871 SP3Q02447 781 aa22.75■■□□□ 1.23
ATPAF2-209ENST00000497871 BRI3BPQ8WY22 251 aa22.75■■□□□ 1.23
ATPAF2-209ENST00000497871 API5Q9BZZ5 524 aaKnown RBP22.75■■□□□ 1.23
ATPAF2-209ENST00000497871 CEP126Q9P2H0 1117 aa22.75■■□□□ 1.23
ATPAF2-209ENST00000497871 PDE4DIPQ5VU43 2346 aa22.75■■□□□ 1.23
ATPAF2-209ENST00000497871 CCL15-CCL14A0A0B4J2E2 113 aa22.74■■□□□ 1.23
ATPAF2-209ENST00000497871 CCL15Q16663 113 aa22.74■■□□□ 1.23
ATPAF2-209ENST00000497871 SPDYE5A6NIY4 337 aa22.73■■□□□ 1.23
ATPAF2-209ENST00000497871 INTS3Q68E01 1043 aaKnown RBP22.73■■□□□ 1.23
ATPAF2-209ENST00000497871 CD99L2Q8TCZ2 262 aa22.73■■□□□ 1.23
ATPAF2-209ENST00000497871 OTUD5Q96G74 571 aa22.73■■□□□ 1.23
ATPAF2-209ENST00000497871 SIL1Q9H173 461 aa22.73■■□□□ 1.23
ATPAF2-209ENST00000497871 EFCC1Q9HA90 598 aa22.73■■□□□ 1.23
ATPAF2-209ENST00000497871 ZFYVE28Q9HCC9 887 aa22.73■■□□□ 1.23
ATPAF2-209ENST00000497871 GNL3LQ9NVN8 582 aaKnown RBP22.73■■□□□ 1.23
ATPAF2-209ENST00000497871 PTPN22Q9Y2R2 807 aa22.73■■□□□ 1.23
ATPAF2-209ENST00000497871 ARAP2Q8WZ64 1704 aa22.73■■□□□ 1.23
ATPAF2-209ENST00000497871 ATP2B3Q16720 1220 aa22.72■■□□□ 1.23
ATPAF2-209ENST00000497871 DCAF15Q66K64 600 aa22.72■■□□□ 1.23
ATPAF2-209ENST00000497871 ERO1BQ86YB8 467 aa22.72■■□□□ 1.23
ATPAF2-209ENST00000497871 IL15P40933 162 aaPredicted RBP22.71■■□□□ 1.23
ATPAF2-209ENST00000497871 TAF1CQ15572 869 aaPredicted RBP22.71■■□□□ 1.23
ATPAF2-209ENST00000497871 WRNIP1Q96S55 665 aa22.71■■□□□ 1.23
ATPAF2-209ENST00000497871 SNCAIPQ9Y6H5 919 aa22.71■■□□□ 1.23
ATPAF2-209ENST00000497871 LAMB1P07942 1786 aa22.71■■□□□ 1.23
ATPAF2-209ENST00000497871 CETPP11597 493 aa22.7■■□□□ 1.22
ATPAF2-209ENST00000497871 ARHGEF6Q15052 776 aa22.7■■□□□ 1.22
ATPAF2-209ENST00000497871 FAM43AQ8N2R8 423 aa22.7■■□□□ 1.22
ATPAF2-209ENST00000497871 FAM151AQ8WW52 585 aa22.7■■□□□ 1.22
ATPAF2-209ENST00000497871 ZKSCAN4Q969J2 545 aaPredicted RBP22.7■■□□□ 1.22
ATPAF2-209ENST00000497871 LRRFIP2Q9Y608 721 aaKnown RBP22.7■■□□□ 1.22
ATPAF2-209ENST00000497871 RPAP1Q9BWH6 1393 aaPredicted RBP22.69■■□□□ 1.22
ATPAF2-209ENST00000497871 SEMA3EO15041 775 aa22.69■■□□□ 1.22
ATPAF2-209ENST00000497871 ZBTB22O15209 634 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms