RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 GPRC5DQ9NZD1 345 aa17.13■□□□□ 0.33
VPS26A-209ENST00000497564 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
VPS26A-209ENST00000497564 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
VPS26A-209ENST00000497564 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
VPS26A-209ENST00000497564 KLRK1P26718 216 aa17.12■□□□□ 0.33
VPS26A-209ENST00000497564 HIBADHP31937 336 aaKnown RBP17.12■□□□□ 0.33
VPS26A-209ENST00000497564 TXNRD3Q86VQ6 643 aa17.12■□□□□ 0.33
VPS26A-209ENST00000497564 ZC3H12CQ9C0D7 883 aaKnown RBP17.12■□□□□ 0.33
VPS26A-209ENST00000497564 ANTXR1Q9H6X2 564 aa17.12■□□□□ 0.33
VPS26A-209ENST00000497564 DENND2AQ9ULE3 1009 aa17.12■□□□□ 0.33
VPS26A-209ENST00000497564 ZFYP08048 801 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-209ENST00000497564 LMOD1P29536 600 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-209ENST00000497564 NMIQ13287 307 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-209ENST00000497564 MAP1SQ66K74 1059 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-209ENST00000497564 PI16Q6UXB8 463 aa17.11■□□□□ 0.33
VPS26A-209ENST00000497564 VPS37DQ86XT2 251 aa17.11■□□□□ 0.33
VPS26A-209ENST00000497564 DNAJC5GQ8N7S2 189 aa17.11■□□□□ 0.33
VPS26A-209ENST00000497564 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
VPS26A-209ENST00000497564 RBM25P49756 843 aaKnown RBP17.1■□□□□ 0.33
VPS26A-209ENST00000497564 TNIP1Q15025 636 aa17.1■□□□□ 0.33
VPS26A-209ENST00000497564 ZSCAN25Q6NSZ9 544 aa17.1■□□□□ 0.33
VPS26A-209ENST00000497564 CWC27Q6UX04 472 aaKnown RBP17.1■□□□□ 0.33
VPS26A-209ENST00000497564 ZNF804AQ7Z570 1209 aa17.1■□□□□ 0.33
VPS26A-209ENST00000497564 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
VPS26A-209ENST00000497564 C22orf23Q9BZE7 217 aa17.1■□□□□ 0.33
VPS26A-209ENST00000497564 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
VPS26A-209ENST00000497564 IGSF3O75054 1194 aa17.09■□□□□ 0.33
VPS26A-209ENST00000497564 ITGBL1O95965 494 aaPredicted RBP17.09■□□□□ 0.33
VPS26A-209ENST00000497564 ZMYM1Q5SVZ6 1142 aa17.09■□□□□ 0.33
VPS26A-209ENST00000497564 PNMA8AQ86V59 439 aaPredicted RBP17.09■□□□□ 0.33
VPS26A-209ENST00000497564 TRPM4Q8TD43 1214 aa17.09■□□□□ 0.33
VPS26A-209ENST00000497564 FAM227BQ96M60 508 aa17.09■□□□□ 0.33
VPS26A-209ENST00000497564 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.33
VPS26A-209ENST00000497564 IL25Q9H293 177 aa17.09■□□□□ 0.33
VPS26A-209ENST00000497564 PIH1D3Q9NQM4 214 aaKnown RBP17.09■□□□□ 0.33
VPS26A-209ENST00000497564 HELLSQ9NRZ9 838 aa17.09■□□□□ 0.33
VPS26A-209ENST00000497564 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
VPS26A-209ENST00000497564 PASKQ96RG2 1323 aa17.08■□□□□ 0.32
VPS26A-209ENST00000497564 A0A0D9SFI3 127 aa17.08■□□□□ 0.32
VPS26A-209ENST00000497564 HIRAP54198 1017 aaPredicted RBP17.08■□□□□ 0.32
VPS26A-209ENST00000497564 FMR1Q06787 632 aaKnown RBP eCLIP17.08■□□□□ 0.32
VPS26A-209ENST00000497564 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.32
VPS26A-209ENST00000497564 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
VPS26A-209ENST00000497564 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
VPS26A-209ENST00000497564 EGFRP00533 1210 aa17.07■□□□□ 0.32
VPS26A-209ENST00000497564 IL1R1P14778 569 aa17.07■□□□□ 0.32
VPS26A-209ENST00000497564 UBE3CQ15386 1083 aa17.07■□□□□ 0.32
VPS26A-209ENST00000497564 MICALL2Q8IY33 904 aa17.07■□□□□ 0.32
VPS26A-209ENST00000497564 ADARB2Q9NS39 739 aaKnown RBP17.07■□□□□ 0.32
VPS26A-209ENST00000497564 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
VPS26A-209ENST00000497564 G3V3G9 751 aa17.06■□□□□ 0.32
VPS26A-209ENST00000497564 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
VPS26A-209ENST00000497564 ADD2P35612 726 aa17.06■□□□□ 0.32
VPS26A-209ENST00000497564 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
VPS26A-209ENST00000497564 DCAF8Q5TAQ9 597 aa17.06■□□□□ 0.32
VPS26A-209ENST00000497564 TMED8Q6PL24 325 aaPredicted RBP17.06■□□□□ 0.32
VPS26A-209ENST00000497564 USP50Q70EL3 339 aaPredicted RBP17.06■□□□□ 0.32
VPS26A-209ENST00000497564 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
VPS26A-209ENST00000497564 LSG1Q9H089 658 aaKnown RBP17.06■□□□□ 0.32
VPS26A-209ENST00000497564 CDK5RAP2Q96SN8 1893 aa17.05■□□□□ 0.32
VPS26A-209ENST00000497564 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
VPS26A-209ENST00000497564 KIAA1211Q6ZU35 1233 aa17.05■□□□□ 0.32
VPS26A-209ENST00000497564 APPBP2Q92624 585 aa17.05■□□□□ 0.32
VPS26A-209ENST00000497564 MXD3Q9BW11 206 aa17.05■□□□□ 0.32
VPS26A-209ENST00000497564 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
VPS26A-209ENST00000497564 ANO2Q9NQ90 1003 aa17.05■□□□□ 0.32
VPS26A-209ENST00000497564 IQSEC3Q9UPP2 1182 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-209ENST00000497564 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
VPS26A-209ENST00000497564 TCRBV5S4A2TA0A5A2 114 aa17.04■□□□□ 0.32
VPS26A-209ENST00000497564 PDE6AP16499 860 aa17.04■□□□□ 0.32
VPS26A-209ENST00000497564 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
VPS26A-209ENST00000497564 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
VPS26A-209ENST00000497564 WDR66Q8TBY9 1149 aa17.04■□□□□ 0.32
VPS26A-209ENST00000497564 DPF2Q92785 391 aa17.04■□□□□ 0.32
VPS26A-209ENST00000497564 COA1Q9GZY4 146 aa17.04■□□□□ 0.32
VPS26A-209ENST00000497564 MAST3O60307 1309 aa17.03■□□□□ 0.32
VPS26A-209ENST00000497564 FAM205AQ6ZU69 1335 aa17.03■□□□□ 0.32
VPS26A-209ENST00000497564 TRAF5O00463 557 aa17.03■□□□□ 0.32
VPS26A-209ENST00000497564 FRAT2O75474 233 aaPredicted RBP17.03■□□□□ 0.32
VPS26A-209ENST00000497564 IDH1O75874 414 aaKnown RBP17.03■□□□□ 0.32
VPS26A-209ENST00000497564 CHGBP05060 677 aa17.03■□□□□ 0.32
VPS26A-209ENST00000497564 ANP32AP39687 249 aaKnown RBP17.03■□□□□ 0.32
VPS26A-209ENST00000497564 SLC9C2Q5TAH2 1124 aa17.03■□□□□ 0.32
VPS26A-209ENST00000497564 RSBN1LQ6PCB5 846 aaPredicted RBP17.03■□□□□ 0.32
VPS26A-209ENST00000497564 ZNF589Q86UQ0 364 aaPredicted RBP17.03■□□□□ 0.32
VPS26A-209ENST00000497564 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
VPS26A-209ENST00000497564 GMLQ99445 158 aa17.03■□□□□ 0.32
VPS26A-209ENST00000497564 USP17L3A6NCW0 530 aa17.02■□□□□ 0.32
VPS26A-209ENST00000497564 USP17L4A6NCW7 530 aa17.02■□□□□ 0.32
VPS26A-209ENST00000497564 H7C1D1 291 aa17.02■□□□□ 0.32
VPS26A-209ENST00000497564 MCCP23508 829 aa17.02■□□□□ 0.32
VPS26A-209ENST00000497564 RPS12P25398 132 aaKnown RBP17.02■□□□□ 0.32
VPS26A-209ENST00000497564 DLK2Q6UY11 383 aa17.02■□□□□ 0.32
VPS26A-209ENST00000497564 USP17L1Q7RTZ2 530 aa17.02■□□□□ 0.32
VPS26A-209ENST00000497564 PODNQ7Z5L7 613 aa17.02■□□□□ 0.32
VPS26A-209ENST00000497564 MAP4K1Q92918 833 aa17.02■□□□□ 0.32
VPS26A-209ENST00000497564 OSBP2Q969R2 916 aa17.02■□□□□ 0.32
VPS26A-209ENST00000497564 KLRG1Q96E93 195 aa17.02■□□□□ 0.32
VPS26A-209ENST00000497564 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
VPS26A-209ENST00000497564 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms