RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 KLRG2A4D1S0 409 aaPredicted RBP7.33□□□□□ -1.24
UBE3C-208ENST00000497368 ZBBXA8MT70 800 aa7.33□□□□□ -1.24
UBE3C-208ENST00000497368 HTATSF1O43719 755 aaKnown RBP7.33□□□□□ -1.24
UBE3C-208ENST00000497368 FBXO45P0C2W1 286 aa7.33□□□□□ -1.24
UBE3C-208ENST00000497368 SRGNP10124 158 aa7.33□□□□□ -1.24
UBE3C-208ENST00000497368 PROSER3Q2NL68 480 aa7.33□□□□□ -1.24
UBE3C-208ENST00000497368 CCDC116Q8IYX3 515 aa7.33□□□□□ -1.24
UBE3C-208ENST00000497368 BRIP1Q9BX63 1249 aa7.33□□□□□ -1.24
UBE3C-208ENST00000497368 ZNF330Q9Y3S2 320 aaPredicted RBP7.33□□□□□ -1.24
UBE3C-208ENST00000497368 SNRPA1P09661 255 aaKnown RBP7.32□□□□□ -1.24
UBE3C-208ENST00000497368 RAB15P59190 212 aa7.32□□□□□ -1.24
UBE3C-208ENST00000497368 KRT24Q2M2I5 525 aa7.32□□□□□ -1.24
UBE3C-208ENST00000497368 PRPF40BQ6NWY9 871 aaKnown RBP7.32□□□□□ -1.24
UBE3C-208ENST00000497368 TTLL6Q8N841 843 aa7.32□□□□□ -1.24
UBE3C-208ENST00000497368 CNBD1Q8NA66 436 aa7.32□□□□□ -1.24
UBE3C-208ENST00000497368 TRIM47Q96LD4 638 aa7.32□□□□□ -1.24
UBE3C-208ENST00000497368 TEX13AQ9BXU3 409 aaPredicted RBP7.32□□□□□ -1.24
UBE3C-208ENST00000497368 SCN9AQ15858 1988 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 ZNF541Q9H0D2 1346 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 C21orf2O43822 256 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 TOMM70O94826 608 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 NTSR2O95665 410 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 ANXA1P04083 346 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 LMNB1P20700 586 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 TAF7Q15545 349 aaPredicted RBP7.31□□□□□ -1.24
UBE3C-208ENST00000497368 CRY2Q49AN0 593 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 INTS6LQ5JSJ4 861 aaKnown RBP7.31□□□□□ -1.24
UBE3C-208ENST00000497368 PPP1R26Q5T8A7 1209 aaPredicted RBP7.31□□□□□ -1.24
UBE3C-208ENST00000497368 STYK1Q6J9G0 422 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 MRPL14Q6P1L8 145 aaKnown RBP7.31□□□□□ -1.24
UBE3C-208ENST00000497368 ZNF775Q96BV0 537 aaPredicted RBP7.31□□□□□ -1.24
UBE3C-208ENST00000497368 SENP2Q9HC62 589 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 CDV3Q9UKY7 258 aaKnown RBP7.31□□□□□ -1.24
UBE3C-208ENST00000497368 NUDCQ9Y266 331 aa7.31□□□□□ -1.24
UBE3C-208ENST00000497368 MAP3K15Q6ZN16 1313 aa7.3□□□□□ -1.24
UBE3C-208ENST00000497368 MYBBP1AQ9BQG0 1328 aaKnown RBP7.3□□□□□ -1.24
UBE3C-208ENST00000497368 TRPM7Q96QT4 1865 aa7.3□□□□□ -1.24
UBE3C-208ENST00000497368 H0YIN7 160 aa7.3□□□□□ -1.24
UBE3C-208ENST00000497368 CLEC4GQ6UXB4 293 aa7.3□□□□□ -1.24
UBE3C-208ENST00000497368 ZFP42Q96MM3 310 aa7.3□□□□□ -1.24
UBE3C-208ENST00000497368 PURBQ96QR8 312 aaKnown RBP7.3□□□□□ -1.24
UBE3C-208ENST00000497368 RRAGCQ9HB90 399 aa7.3□□□□□ -1.24
UBE3C-208ENST00000497368 PCDHB9Q9Y5E1 797 aa7.3□□□□□ -1.24
UBE3C-208ENST00000497368 MYH3P11055 1940 aa7.3□□□□□ -1.24
UBE3C-208ENST00000497368 GLTPD2A6NH11 291 aa7.29□□□□□ -1.24
UBE3C-208ENST00000497368 APBB1O00213 710 aa7.29□□□□□ -1.24
UBE3C-208ENST00000497368 TMPOP42166 694 aaKnown RBP7.29□□□□□ -1.24
UBE3C-208ENST00000497368 NR1H3Q13133 447 aa7.29□□□□□ -1.24
UBE3C-208ENST00000497368 NBPF20Q3BBV1 942 aa7.29□□□□□ -1.24
UBE3C-208ENST00000497368 CCDC146Q8IYE0 955 aa7.29□□□□□ -1.24
UBE3C-208ENST00000497368 ZNF34Q8IZ26 560 aa7.29□□□□□ -1.24
UBE3C-208ENST00000497368 RTF1Q92541 710 aaKnown RBP7.29□□□□□ -1.24
UBE3C-208ENST00000497368 ZNF622Q969S3 477 aaKnown RBP eCLIP7.29□□□□□ -1.24
UBE3C-208ENST00000497368 SETDB2Q96T68 719 aa7.29□□□□□ -1.24
UBE3C-208ENST00000497368 NIP7Q9Y221 180 aaKnown RBP eCLIP7.29□□□□□ -1.24
UBE3C-208ENST00000497368 RRP7AQ9Y3A4 280 aaKnown RBP7.29□□□□□ -1.24
UBE3C-208ENST00000497368 PDE6BP35913 854 aa7.28□□□□□ -1.24
UBE3C-208ENST00000497368 CBLBQ13191 982 aa7.28□□□□□ -1.24
UBE3C-208ENST00000497368 DDX10Q13206 875 aaKnown RBP7.28□□□□□ -1.24
UBE3C-208ENST00000497368 CCDC184Q52MB2 194 aa7.28□□□□□ -1.24
UBE3C-208ENST00000497368 C6orf118Q5T5N4 469 aa7.28□□□□□ -1.24
UBE3C-208ENST00000497368 SUSD4Q5VX71 490 aa7.28□□□□□ -1.24
UBE3C-208ENST00000497368 MEIOBQ8N635 442 aa7.28□□□□□ -1.24
UBE3C-208ENST00000497368 KIFC2Q96AC6 838 aa7.28□□□□□ -1.24
UBE3C-208ENST00000497368 MASTLQ96GX5 879 aa7.28□□□□□ -1.24
UBE3C-208ENST00000497368 TMPRSS4Q9NRS4 437 aa7.28□□□□□ -1.24
UBE3C-208ENST00000497368 PGPEP1Q9NXJ5 209 aa7.28□□□□□ -1.24
UBE3C-208ENST00000497368 ERBB4Q15303 1308 aa7.27□□□□□ -1.24
UBE3C-208ENST00000497368 KDM2BQ8NHM5 1336 aa7.27□□□□□ -1.24
UBE3C-208ENST00000497368 FAM177BA6PVY3 158 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 ERVV-1B6SEH8 477 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 DDNO94850 711 aaPredicted RBP7.27□□□□□ -1.25
UBE3C-208ENST00000497368 MYL6BP14649 208 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 NPR1P16066 1061 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 GPTP24298 496 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 ST5P78524 1137 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 FSTL1Q12841 308 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 SCARF1Q14162 830 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 MCM6Q14566 821 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 RALBP1Q15311 655 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 NBPF5PQ86XG9 351 aaPredicted RBP7.27□□□□□ -1.25
UBE3C-208ENST00000497368 SYNE4Q8N205 404 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 JMYQ8N9B5 988 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 TAOK3Q9H2K8 898 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 PRKRIP1Q9H875 184 aaPredicted RBP7.27□□□□□ -1.25
UBE3C-208ENST00000497368 PASKQ96RG2 1323 aa7.27□□□□□ -1.25
UBE3C-208ENST00000497368 ESPNB1AK53 854 aa7.26□□□□□ -1.25
UBE3C-208ENST00000497368 ERVH48-1M5A8F1 160 aa7.26□□□□□ -1.25
UBE3C-208ENST00000497368 CHL1O00533 1208 aa7.26□□□□□ -1.25
UBE3C-208ENST00000497368 ZNF853P0CG23 659 aa7.26□□□□□ -1.25
UBE3C-208ENST00000497368 HOXA10P31260 410 aaPredicted RBP7.26□□□□□ -1.25
UBE3C-208ENST00000497368 RIPK4P57078 832 aa7.26□□□□□ -1.25
UBE3C-208ENST00000497368 FKBP4Q02790 459 aaKnown RBP eCLIP7.26□□□□□ -1.25
UBE3C-208ENST00000497368 DHX9Q08211 1270 aaKnown RBP7.26□□□□□ -1.25
UBE3C-208ENST00000497368 IRF5Q13568 498 aa7.26□□□□□ -1.25
UBE3C-208ENST00000497368 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
UBE3C-208ENST00000497368 NGEFQ8N5V2 710 aa7.26□□□□□ -1.25
UBE3C-208ENST00000497368 CNKSR1Q969H4 720 aa7.26□□□□□ -1.25
UBE3C-208ENST00000497368 KLRG1Q96E93 195 aa7.26□□□□□ -1.25
UBE3C-208ENST00000497368 GDPD2Q9HCC8 539 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms