RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 NLGN1Q8N2Q7 840 aa18.7■□□□□ 0.58
RPN1-207ENST00000497289 GTF3C6Q969F1 213 aa18.7■□□□□ 0.58
RPN1-207ENST00000497289 LRRC2Q9BYS8 371 aa18.7■□□□□ 0.58
RPN1-207ENST00000497289 ARMT1Q9H993 441 aa18.7■□□□□ 0.58
RPN1-207ENST00000497289 IRS2Q9Y4H2 1338 aa18.7■□□□□ 0.58
RPN1-207ENST00000497289 STX6O43752 255 aa18.7■□□□□ 0.58
RPN1-207ENST00000497289 CYP7A1P22680 504 aa18.7■□□□□ 0.58
RPN1-207ENST00000497289 STK3Q13188 491 aa18.7■□□□□ 0.58
RPN1-207ENST00000497289 RALYLQ86SE5 291 aaKnown RBP18.7■□□□□ 0.58
RPN1-207ENST00000497289 COL23A1Q86Y22 540 aaPredicted RBP18.7■□□□□ 0.58
RPN1-207ENST00000497289 SYT1P21579 422 aa18.69■□□□□ 0.58
RPN1-207ENST00000497289 PDIA4P13667 645 aaKnown RBP18.68■□□□□ 0.58
RPN1-207ENST00000497289 MCM5P33992 734 aa18.68■□□□□ 0.58
RPN1-207ENST00000497289 MB21D2Q8IYB1 491 aaPredicted RBP18.68■□□□□ 0.58
RPN1-207ENST00000497289 IFNL3Q8IZI9 196 aa18.68■□□□□ 0.58
RPN1-207ENST00000497289 LCORLQ8N3X6 602 aa18.68■□□□□ 0.58
RPN1-207ENST00000497289 FBXL16Q8N461 479 aa18.68■□□□□ 0.58
RPN1-207ENST00000497289 NAPBQ9H115 298 aa18.68■□□□□ 0.58
RPN1-207ENST00000497289 WDR19Q8NEZ3 1342 aa18.68■□□□□ 0.58
RPN1-207ENST00000497289 QSER1Q2KHR3 1735 aa18.68■□□□□ 0.58
RPN1-207ENST00000497289 ZSCAN22P10073 491 aaPredicted RBP18.68■□□□□ 0.58
RPN1-207ENST00000497289 TRDNQ13061 729 aa18.68■□□□□ 0.58
RPN1-207ENST00000497289 NACAP1Q9BZK3 213 aa18.68■□□□□ 0.58
RPN1-207ENST00000497289 HOXA10P31260 410 aaPredicted RBP18.67■□□□□ 0.58
RPN1-207ENST00000497289 EPB41L4AQ9HCS5 686 aaPredicted RBP18.67■□□□□ 0.58
RPN1-207ENST00000497289 SLC4A4Q9Y6R1 1079 aa18.67■□□□□ 0.58
RPN1-207ENST00000497289 DUOX1Q9NRD9 1551 aa18.67■□□□□ 0.58
RPN1-207ENST00000497289 MAGEB6P1A0A0J9YX57 407 aa18.67■□□□□ 0.58
RPN1-207ENST00000497289 KLRG2A4D1S0 409 aaPredicted RBP18.67■□□□□ 0.58
RPN1-207ENST00000497289 PFKFB2O60825 505 aa18.67■□□□□ 0.58
RPN1-207ENST00000497289 APOBRQ0VD83 1088 aa18.67■□□□□ 0.58
RPN1-207ENST00000497289 LTBP1Q14766 1721 aa18.67■□□□□ 0.58
RPN1-207ENST00000497289 MIGA1Q8NAN2 632 aa18.67■□□□□ 0.58
RPN1-207ENST00000497289 CRAMP1Q96RY5 1269 aa18.67■□□□□ 0.58
RPN1-207ENST00000497289 NBPF3Q9H094 633 aa18.67■□□□□ 0.58
RPN1-207ENST00000497289 TCHHQ07283 1943 aa18.66■□□□□ 0.58
RPN1-207ENST00000497289 GSG1L2A8MUP6 293 aa18.66■□□□□ 0.58
RPN1-207ENST00000497289 PRC1O43663 620 aa18.66■□□□□ 0.58
RPN1-207ENST00000497289 BBOX1O75936 387 aa18.66■□□□□ 0.58
RPN1-207ENST00000497289 PDCP20941 246 aa18.66■□□□□ 0.58
RPN1-207ENST00000497289 NAA16Q6N069 864 aaPredicted RBP18.66■□□□□ 0.58
RPN1-207ENST00000497289 POTEAQ6S8J7 498 aa18.66■□□□□ 0.58
RPN1-207ENST00000497289 C15orf52Q6ZUT6 534 aaKnown RBP18.66■□□□□ 0.58
RPN1-207ENST00000497289 CHST3Q7LGC8 479 aa18.66■□□□□ 0.58
RPN1-207ENST00000497289 TBC1D10CQ8IV04 446 aa18.66■□□□□ 0.58
RPN1-207ENST00000497289 COL11A2P13942 1736 aaPredicted RBP18.66■□□□□ 0.58
RPN1-207ENST00000497289 TMED8Q6PL24 325 aaPredicted RBP18.65■□□□□ 0.58
RPN1-207ENST00000497289 TXNRD3Q86VQ6 643 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 CHMP4CQ96CF2 233 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 LAMB1P07942 1786 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 F13A1P00488 732 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 ATP2B4P23634 1241 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 TDO2P48775 406 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 GPSM2P81274 684 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 CHAF1AQ13111 956 aaPredicted RBP18.65■□□□□ 0.58
RPN1-207ENST00000497289 TMC4Q7Z404 712 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 ZNF804AQ7Z570 1209 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 ADGRA1Q86SQ6 560 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 ZNF274Q96GC6 653 aaPredicted RBP18.65■□□□□ 0.58
RPN1-207ENST00000497289 LLPHQ9BRT6 129 aaKnown RBP18.65■□□□□ 0.58
RPN1-207ENST00000497289 LMBRD1Q9NUN5 540 aa18.65■□□□□ 0.58
RPN1-207ENST00000497289 SCRN1Q12765 414 aa18.64■□□□□ 0.57
RPN1-207ENST00000497289 BRIP1Q9BX63 1249 aa18.64■□□□□ 0.57
RPN1-207ENST00000497289 ATP6V1DQ9Y5K8 247 aa18.64■□□□□ 0.57
RPN1-207ENST00000497289 PRKAB2O43741 272 aa18.64■□□□□ 0.57
RPN1-207ENST00000497289 IGSF3O75054 1194 aa18.64■□□□□ 0.57
RPN1-207ENST00000497289 LARP1BQ659C4 914 aaKnown RBP18.64■□□□□ 0.57
RPN1-207ENST00000497289 MTMR6Q9Y217 621 aa18.64■□□□□ 0.57
RPN1-207ENST00000497289 BAZ2AQ9UIF9 1905 aaKnown RBP18.63■□□□□ 0.57
RPN1-207ENST00000497289 EVCP57679 992 aa18.63■□□□□ 0.57
RPN1-207ENST00000497289 ANTXR2P58335 489 aa18.63■□□□□ 0.57
RPN1-207ENST00000497289 SPTY2D1Q68D10 685 aaPredicted RBP18.63■□□□□ 0.57
RPN1-207ENST00000497289 SLC51AQ86UW1 340 aa18.63■□□□□ 0.57
RPN1-207ENST00000497289 NSUN4Q96CB9 384 aaKnown RBP18.63■□□□□ 0.57
RPN1-207ENST00000497289 GGA1Q9UJY5 639 aa18.63■□□□□ 0.57
RPN1-207ENST00000497289 SALL1Q9NSC2 1324 aa18.63■□□□□ 0.57
RPN1-207ENST00000497289 UFL1O94874 794 aa18.62■□□□□ 0.57
RPN1-207ENST00000497289 KLHL40Q2TBA0 621 aa18.62■□□□□ 0.57
RPN1-207ENST00000497289 RIOK1Q9BRS2 568 aaKnown RBP18.62■□□□□ 0.57
RPN1-207ENST00000497289 NSFL1CQ9UNZ2 370 aaKnown RBP18.62■□□□□ 0.57
RPN1-207ENST00000497289 PARP3Q9Y6F1 533 aa18.62■□□□□ 0.57
RPN1-207ENST00000497289 DDX49Q9Y6V7 483 aaKnown RBP18.62■□□□□ 0.57
RPN1-207ENST00000497289 VPS37CA5D8V6 355 aaPredicted RBP18.62■□□□□ 0.57
RPN1-207ENST00000497289 PRPF40AO75400 957 aaKnown RBP18.62■□□□□ 0.57
RPN1-207ENST00000497289 MECOMQ03112 1051 aa18.62■□□□□ 0.57
RPN1-207ENST00000497289 TDRD7Q8NHU6 1098 aaKnown RBP18.62■□□□□ 0.57
RPN1-207ENST00000497289 WDR66Q8TBY9 1149 aa18.62■□□□□ 0.57
RPN1-207ENST00000497289 GZF1Q9H116 711 aaPredicted RBP18.62■□□□□ 0.57
RPN1-207ENST00000497289 CNNM2Q9H8M5 875 aa18.62■□□□□ 0.57
RPN1-207ENST00000497289 PODXL2Q9NZ53 605 aa18.62■□□□□ 0.57
RPN1-207ENST00000497289 NAP1L2Q9ULW6 460 aaPredicted RBP18.62■□□□□ 0.57
RPN1-207ENST00000497289 NEDD4P46934 1319 aa18.61■□□□□ 0.57
RPN1-207ENST00000497289 PPEF1O14829 653 aaPredicted RBP18.61■□□□□ 0.57
RPN1-207ENST00000497289 DTNBO60941 627 aa18.61■□□□□ 0.57
RPN1-207ENST00000497289 PDIA3P30101 505 aaKnown RBP18.61■□□□□ 0.57
RPN1-207ENST00000497289 SMARCC2Q8TAQ2 1214 aa18.61■□□□□ 0.57
RPN1-207ENST00000497289 MYH15Q9Y2K3 1946 aa18.61■□□□□ 0.57
RPN1-207ENST00000497289 MMP10P09238 476 aa18.61■□□□□ 0.57
RPN1-207ENST00000497289 CTDSPL2Q05D32 466 aa18.61■□□□□ 0.57
RPN1-207ENST00000497289 AKNAD1Q5T1N1 836 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms