RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 CAMKK2Q96RR4 588 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 SLC6A16Q9GZN6 736 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 RBSNQ9H1K0 784 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 TNKS2Q9H2K2 1166 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 CAAP1Q9H8G2 361 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 ARHGEF10LQ9HCE6 1279 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 ABCB6Q9NP58 842 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 ST7Q9NRC1 585 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 RAB6BQ9NRW1 208 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 ZNRF3Q9ULT6 936 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 KCNMB2Q9Y691 235 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 TARBP1Q13395 1621 aaKnown RBP2.49□□□□□ -2.01
UBR4-217ENST00000497018 MAP3K4Q9Y6R4 1608 aa2.49□□□□□ -2.01
UBR4-217ENST00000497018 KDM2BQ8NHM5 1336 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 POTEB2H3BUK9 544 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 IRS4O14654 1257 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 EREGO14944 169 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 PRPF3O43395 683 aaKnown RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 PDE8AO60658 829 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 PHACTR2O75167 634 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 ZPR1O75312 459 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 MICAL2O94851 1124 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 TRIM37O94972 964 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 KIF4AO95239 1232 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 RASGRP1O95267 797 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 KRT18P05783 430 aaKnown RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 FAM163BP0C2L3 166 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 RLBP1P12271 317 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 MYCLP1P12525 358 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 ATF3P18847 181 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 TFE3P19532 575 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 CNGA1P29973 690 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 ADD1P35611 737 aaKnown RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 SOX5P35711 763 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 GGCXP38435 758 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 EIF6P56537 245 aaKnown RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 PIN1Q13526 163 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 CAMK2GQ13555 558 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 SAFB2Q14151 953 aaKnown RBP eCLIP2.48□□□□□ -2.01
UBR4-217ENST00000497018 C21orf62-AS1Q17RA5 79 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 INO80DQ53TQ3 878 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 C10orf62Q5T681 223 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 ACBD5Q5T8D3 534 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 PEAR1Q5VY43 1037 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 ERAP2Q6P179 960 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 ANKRD13DQ6ZTN6 518 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 LSRQ86X29 649 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 TCEAL8Q8IYN2 117 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 SPICE1Q8N0Z3 855 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 GPATCH11Q8N954 259 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 C19orf47Q8N9M1 422 aaKnown RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 GOLM1Q8NBJ4 401 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 RBBP8NLQ8NC74 664 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 ZSWIM2Q8NEG5 633 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 OR6P1Q8NGX9 317 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 FBXO27Q8NI29 283 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 CPLX3Q8WVH0 158 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 PPM1EQ8WY54 764 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 NKD1Q969G9 470 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 L3MBTL2Q969R5 705 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 FAM13BQ9NYF5 915 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 MAP3K20Q9NYL2 800 aaKnown RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 TMEM63CQ9P1W3 806 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 PFDN2Q9UHV9 154 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 NRBP1Q9UHY1 535 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 MCM8Q9UJA3 840 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 FBXO9Q9UK97 447 aaPredicted RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 TLR6Q9Y2C9 796 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 HCN4Q9Y3Q4 1203 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 R3HCC1Q9Y3T6 440 aaKnown RBP2.48□□□□□ -2.01
UBR4-217ENST00000497018 SHROOM2Q13796 1616 aa2.48□□□□□ -2.01
UBR4-217ENST00000497018 PBRM1Q86U86 1689 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 WDR97A6NE52 1622 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 A0A1W2PP55 124 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 FAM221AA4D161 298 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 KLRG2A4D1S0 409 aaPredicted RBP2.47□□□□□ -2.01
UBR4-217ENST00000497018 HRO43593 1189 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 NRDCO43847 1150 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 FBXO24O75426 580 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 KATNA1O75449 491 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 ABLIM3O94929 683 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 RAPGEF3O95398 923 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 F2P00734 622 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 FOSP01100 380 aaPredicted RBP2.47□□□□□ -2.01
UBR4-217ENST00000497018 FAM153BP0C7A2 387 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 SRGNP10124 158 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 VARSP26640 1264 aaKnown RBP2.47□□□□□ -2.01
UBR4-217ENST00000497018 INPP5BP32019 993 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 TXLNAP40222 546 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 GRM5P41594 1212 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 SKOR1P84550 965 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 NFKB2Q00653 900 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 SSRP1Q08945 709 aaKnown RBP2.47□□□□□ -2.01
UBR4-217ENST00000497018 CLN3Q13286 438 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 PABPC4Q13310 644 aaKnown RBP eCLIP2.47□□□□□ -2.01
UBR4-217ENST00000497018 OS9Q13438 667 aaPredicted RBP2.47□□□□□ -2.01
UBR4-217ENST00000497018 MTMR1Q13613 665 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 MORC3Q14149 939 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 CBX2Q14781 532 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms