RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ADAMTSL4Q6UY14 1074 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 ARMC5Q96C12 935 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 SEC16BQ96JE7 1060 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 RHOVQ96L33 236 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 KCNQ5Q9NR82 932 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 ERBB4Q15303 1308 aa8.4□□□□□ -1.06
SSR3-208ENST00000496050 TFE3P19532 575 aaPredicted RBP8.4□□□□□ -1.06
SSR3-208ENST00000496050 FAM160A1Q05DH4 1040 aa8.4□□□□□ -1.06
SSR3-208ENST00000496050 GOLM1Q8NBJ4 401 aa8.4□□□□□ -1.06
SSR3-208ENST00000496050 WNT8BQ93098 351 aa8.4□□□□□ -1.06
SSR3-208ENST00000496050 EAF1Q96JC9 268 aaPredicted RBP8.4□□□□□ -1.06
SSR3-208ENST00000496050 BTBD6Q96KE9 485 aa8.4□□□□□ -1.06
SSR3-208ENST00000496050 MIR1-1HGQ9H1L0 117 aa8.4□□□□□ -1.06
SSR3-208ENST00000496050 SOX17Q9H6I2 414 aaPredicted RBP8.4□□□□□ -1.06
SSR3-208ENST00000496050 CBX8Q9HC52 389 aa8.4□□□□□ -1.06
SSR3-208ENST00000496050 LOC105371045A0A1W2PR82 267 aa8.39□□□□□ -1.07
SSR3-208ENST00000496050 OIP5O43482 229 aa8.39□□□□□ -1.07
SSR3-208ENST00000496050 EPHA1P21709 976 aa8.39□□□□□ -1.07
SSR3-208ENST00000496050 CDC25BP30305 580 aa8.39□□□□□ -1.07
SSR3-208ENST00000496050 GTF2F1P35269 517 aaKnown RBP eCLIP8.39□□□□□ -1.07
SSR3-208ENST00000496050 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
SSR3-208ENST00000496050 PIP4K2BP78356 416 aa8.39□□□□□ -1.07
SSR3-208ENST00000496050 AP3B2Q13367 1082 aa8.39□□□□□ -1.07
SSR3-208ENST00000496050 COL9A2Q14055 689 aaPredicted RBP8.39□□□□□ -1.07
SSR3-208ENST00000496050 GRIK5Q16478 980 aa8.39□□□□□ -1.07
SSR3-208ENST00000496050 SULF2Q8IWU5 870 aa8.39□□□□□ -1.07
SSR3-208ENST00000496050 TRIM42Q8IWZ5 723 aa8.39□□□□□ -1.07
SSR3-208ENST00000496050 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.39□□□□□ -1.071e-13■□□□□ 8.2
SSR3-208ENST00000496050 LRRC4BQ9NT99 713 aa8.39□□□□□ -1.07
SSR3-208ENST00000496050 ALBP02768 609 aa8.38□□□□□ -1.07
SSR3-208ENST00000496050 GARTP22102 1010 aa8.38□□□□□ -1.07
SSR3-208ENST00000496050 GSTM4Q03013 218 aa8.38□□□□□ -1.07
SSR3-208ENST00000496050 C19orf57Q0VDD7 668 aa8.38□□□□□ -1.07
SSR3-208ENST00000496050 SCARA3Q6AZY7 606 aa8.38□□□□□ -1.07
SSR3-208ENST00000496050 WFDC8Q8IUA0 241 aa8.38□□□□□ -1.07
SSR3-208ENST00000496050 OSGEPQ9NPF4 335 aa8.38□□□□□ -1.07
SSR3-208ENST00000496050 LINC01387J3KSC0 135 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 M0R082 166 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 CYP11A1P05108 521 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 BCRP11274 1271 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 BAG6P46379 1132 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 KRT76Q01546 638 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 APOBRQ0VD83 1088 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 SOGA3Q5TF21 947 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 LLGL2Q6P1M3 1020 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 C1orf229Q6ZS94 237 aaPredicted RBP8.37□□□□□ -1.07
SSR3-208ENST00000496050 FAM196AQ6ZSG2 479 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 CHSY3Q70JA7 882 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 ZNF417Q8TAU3 575 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 SLC7A3Q8WY07 619 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 DHX38Q92620 1227 aaKnown RBP8.37□□□□□ -1.07
SSR3-208ENST00000496050 JARID2Q92833 1246 aaPredicted RBP8.37□□□□□ -1.07
SSR3-208ENST00000496050 NKD1Q969G9 470 aa8.37□□□□□ -1.07
SSR3-208ENST00000496050 ZNF587Q96SQ5 575 aaPredicted RBP8.37□□□□□ -1.07
SSR3-208ENST00000496050 SLURP2P0DP57 97 aa8.36□□□□□ -1.07
SSR3-208ENST00000496050 MSL1Q68DK7 614 aa8.36□□□□□ -1.07
SSR3-208ENST00000496050 MCF2L2Q86YR7 1114 aa8.36□□□□□ -1.07
SSR3-208ENST00000496050 GATAD2BQ8WXI9 593 aa8.36□□□□□ -1.07
SSR3-208ENST00000496050 HIRIP3Q9BW71 556 aaPredicted RBP8.36□□□□□ -1.07
SSR3-208ENST00000496050 PRDM6Q9NQX0 595 aa8.36□□□□□ -1.07
SSR3-208ENST00000496050 UBP1Q9NZI7 540 aa8.36□□□□□ -1.07
SSR3-208ENST00000496050 EFR3BQ9Y2G0 817 aa8.36□□□□□ -1.07
SSR3-208ENST00000496050 PCDHB5Q9Y5E4 795 aa8.36□□□□□ -1.07
SSR3-208ENST00000496050 FSCN2O14926 492 aa8.35□□□□□ -1.07
SSR3-208ENST00000496050 STK10O94804 968 aaKnown RBP8.35□□□□□ -1.07
SSR3-208ENST00000496050 SSBP05455 408 aaKnown RBP eCLIP8.35□□□□□ -1.07
SSR3-208ENST00000496050 AMPD1P23109 780 aa8.35□□□□□ -1.07
SSR3-208ENST00000496050 NASPP49321 788 aaPredicted RBP8.35□□□□□ -1.07
SSR3-208ENST00000496050 RBL2Q08999 1139 aa8.35□□□□□ -1.07
SSR3-208ENST00000496050 GRIN3AQ8TCU5 1115 aa8.35□□□□□ -1.07
SSR3-208ENST00000496050 F13A1P00488 732 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 GSTP1P09211 210 aaKnown RBP8.34□□□□□ -1.07
SSR3-208ENST00000496050 FGRP09769 529 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 HNRNPUQ00839 825 aaKnown RBP eCLIP8.34□□□□□ -1.07
SSR3-208ENST00000496050 ZNF252P-AS1Q0IIN9 211 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 BNC2Q6ZN30 1099 aaPredicted RBP8.34□□□□□ -1.07
SSR3-208ENST00000496050 C8orf86Q6ZUL3 223 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 MAP4K3Q8IVH8 894 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 SLITRK4Q8IW52 837 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 KLHL23Q8NBE8 558 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 STK35Q8TDR2 534 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 CPLX3Q8WVH0 158 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 KCNB2Q92953 911 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 CORO1BQ9BR76 489 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 GINM1Q9NU53 330 aa8.34□□□□□ -1.07
SSR3-208ENST00000496050 TRIM37O94972 964 aa8.33□□□□□ -1.08
SSR3-208ENST00000496050 BPNT1O95861 308 aa8.33□□□□□ -1.08
SSR3-208ENST00000496050 SOX9P48436 509 aa8.33□□□□□ -1.08
SSR3-208ENST00000496050 MPP2Q14168 576 aa8.33□□□□□ -1.08
SSR3-208ENST00000496050 POU4F3Q15319 338 aa8.33□□□□□ -1.08
SSR3-208ENST00000496050 CWF19L2Q2TBE0 894 aaKnown RBP8.33□□□□□ -1.08
SSR3-208ENST00000496050 SEZ6Q53EL9 994 aa8.33□□□□□ -1.08
SSR3-208ENST00000496050 RASIP1Q5U651 963 aa8.33□□□□□ -1.08
SSR3-208ENST00000496050 TXNDC11Q6PKC3 985 aa8.33□□□□□ -1.08
SSR3-208ENST00000496050 DNAJC2Q99543 621 aaKnown RBP8.33□□□□□ -1.08
SSR3-208ENST00000496050 STRIP2Q9ULQ0 834 aa8.33□□□□□ -1.08
SSR3-208ENST00000496050 FAM221AA4D161 298 aa8.32□□□□□ -1.08
SSR3-208ENST00000496050 CILPO75339 1184 aa8.32□□□□□ -1.08
SSR3-208ENST00000496050 CELA2BP08218 269 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms