RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 A0A1W2PPZ6 126 aa8.69□□□□□ -1.02
SRRM1-219ENST00000495561 PCDH1Q08174 1060 aa8.69□□□□□ -1.02
SRRM1-219ENST00000495561 CPSF6Q16630 551 aaKnown RBP eCLIP8.69□□□□□ -1.028e-10■□□□□ 9.4
SRRM1-219ENST00000495561 ZNF423Q2M1K9 1284 aa8.69□□□□□ -1.02
SRRM1-219ENST00000495561 CCNJLQ8IV13 435 aa8.69□□□□□ -1.02
SRRM1-219ENST00000495561 EIF4EBP3O60516 100 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-219ENST00000495561 ADH5P11766 374 aa8.68□□□□□ -1.02
SRRM1-219ENST00000495561 ADMP35318 185 aa8.68□□□□□ -1.02
SRRM1-219ENST00000495561 GRIA4P48058 902 aa8.68□□□□□ -1.02
SRRM1-219ENST00000495561 SPRED3Q2MJR0 410 aa8.68□□□□□ -1.02
SRRM1-219ENST00000495561 GALNT12Q8IXK2 581 aa8.68□□□□□ -1.02
SRRM1-219ENST00000495561 EZH1Q92800 747 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-219ENST00000495561 TCF12Q99081 682 aa8.68□□□□□ -1.02
SRRM1-219ENST00000495561 CLEC4MQ9H2X3 399 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-219ENST00000495561 C1orf115Q9H7X2 142 aa8.68□□□□□ -1.02
SRRM1-219ENST00000495561 RNF114Q9Y508 228 aa8.68□□□□□ -1.02
SRRM1-219ENST00000495561 BTBD11A6QL63 1104 aa8.67□□□□□ -1.02
SRRM1-219ENST00000495561 CTSBP07858 339 aa8.67□□□□□ -1.02
SRRM1-219ENST00000495561 ABI1Q8IZP0 508 aa8.67□□□□□ -1.02
SRRM1-219ENST00000495561 LIN7BQ9HAP6 207 aa8.67□□□□□ -1.02
SRRM1-219ENST00000495561 PRKAG2Q9UGJ0 569 aa8.67□□□□□ -1.02
SRRM1-219ENST00000495561 MAOBP27338 520 aa8.66□□□□□ -1.02
SRRM1-219ENST00000495561 ZAR1Q86SH2 424 aa8.66□□□□□ -1.02
SRRM1-219ENST00000495561 TBC1D32Q96NH3 1257 aa8.66□□□□□ -1.02
SRRM1-219ENST00000495561 METTL22Q9BUU2 404 aaPredicted RBP8.66□□□□□ -1.02
SRRM1-219ENST00000495561 YIPF2Q9BWQ6 316 aa8.66□□□□□ -1.02
SRRM1-219ENST00000495561 CCDC39Q9UFE4 941 aa8.66□□□□□ -1.02
SRRM1-219ENST00000495561 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
SRRM1-219ENST00000495561 ACTL7BQ9Y614 415 aa8.66□□□□□ -1.02
SRRM1-219ENST00000495561 POU4F3Q15319 338 aa8.65□□□□□ -1.02
SRRM1-219ENST00000495561 USPL1Q5W0Q7 1092 aa8.65□□□□□ -1.02
SRRM1-219ENST00000495561 GATA6Q92908 595 aa8.65□□□□□ -1.02
SRRM1-219ENST00000495561 ICMTO60725 284 aa8.64□□□□□ -1.03
SRRM1-219ENST00000495561 PRNPP04156 253 aa8.64□□□□□ -1.03
SRRM1-219ENST00000495561 CYP11A1P05108 521 aa8.64□□□□□ -1.03
SRRM1-219ENST00000495561 NFXL1Q6ZNB6 911 aa8.64□□□□□ -1.03
SRRM1-219ENST00000495561 TRIM56Q9BRZ2 755 aaKnown RBP8.64□□□□□ -1.03
SRRM1-219ENST00000495561 EGFL7Q9UHF1 273 aa8.64□□□□□ -1.03
SRRM1-219ENST00000495561 FAM170BA6NMN3 283 aa8.63□□□□□ -1.03
SRRM1-219ENST00000495561 CYP26A1O43174 497 aa8.63□□□□□ -1.03
SRRM1-219ENST00000495561 ECEL1O95672 775 aa8.62□□□□□ -1.03
SRRM1-219ENST00000495561 NFICP08651 508 aa8.62□□□□□ -1.03
SRRM1-219ENST00000495561 RAB6AP20340 208 aa8.62□□□□□ -1.03
SRRM1-219ENST00000495561 ECM1Q16610 540 aa8.62□□□□□ -1.03
SRRM1-219ENST00000495561 AKAP4Q5JQC9 854 aa8.62□□□□□ -1.03
SRRM1-219ENST00000495561 HP1BP3Q5SSJ5 553 aaPredicted RBP8.62□□□□□ -1.03
SRRM1-219ENST00000495561 KIAA0319Q5VV43 1072 aa8.62□□□□□ -1.03
SRRM1-219ENST00000495561 VSIG10LQ86VR7 867 aa8.62□□□□□ -1.03
SRRM1-219ENST00000495561 BRPF3Q9ULD4 1205 aa8.62□□□□□ -1.03
SRRM1-219ENST00000495561 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
SRRM1-219ENST00000495561 H3BRB1 525 aa8.61□□□□□ -1.03
SRRM1-219ENST00000495561 B3GALT4O96024 378 aa8.61□□□□□ -1.03
SRRM1-219ENST00000495561 YBX3P16989 372 aaKnown RBP eCLIP8.61□□□□□ -1.03
SRRM1-219ENST00000495561 MAP7Q14244 749 aa8.61□□□□□ -1.03
SRRM1-219ENST00000495561 DYMQ7RTS9 669 aa8.61□□□□□ -1.03
SRRM1-219ENST00000495561 SEMA6CQ9H3T2 930 aa8.61□□□□□ -1.03
SRRM1-219ENST00000495561 ZNF576Q9H609 170 aa8.61□□□□□ -1.03
SRRM1-219ENST00000495561 TUT1Q9H6E5 874 aaKnown RBP8.61□□□□□ -1.03
SRRM1-219ENST00000495561 ACSS3Q9H6R3 686 aa8.61□□□□□ -1.03
SRRM1-219ENST00000495561 FAM105AQ9NUU6 356 aa8.61□□□□□ -1.03
SRRM1-219ENST00000495561 BSDC1Q9NW68 430 aaPredicted RBP8.61□□□□□ -1.03
SRRM1-219ENST00000495561 FBXL18Q96ME1 805 aa8.6□□□□□ -1.03
SRRM1-219ENST00000495561 CORO1BQ9BR76 489 aa8.6□□□□□ -1.03
SRRM1-219ENST00000495561 ZFYVE1Q9HBF4 777 aa8.6□□□□□ -1.03
SRRM1-219ENST00000495561 RAD18Q9NS91 495 aa8.6□□□□□ -1.03
SRRM1-219ENST00000495561 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.59□□□□□ -1.03
SRRM1-219ENST00000495561 NEFLP07196 543 aa8.59□□□□□ -1.03
SRRM1-219ENST00000495561 ITPKAP23677 461 aa8.59□□□□□ -1.03
SRRM1-219ENST00000495561 SERPINB4P48594 390 aa8.59□□□□□ -1.03
SRRM1-219ENST00000495561 ORC1Q13415 861 aa8.59□□□□□ -1.03
SRRM1-219ENST00000495561 CBLL1Q75N03 491 aa8.59□□□□□ -1.03
SRRM1-219ENST00000495561 GLYCTKQ8IVS8 523 aa8.59□□□□□ -1.03
SRRM1-219ENST00000495561 DDX54Q8TDD1 881 aaKnown RBP8.59□□□□□ -1.03
SRRM1-219ENST00000495561 EHD4Q9H223 541 aa8.59□□□□□ -1.03
SRRM1-219ENST00000495561 GSX1Q9H4S2 264 aaPredicted RBP8.59□□□□□ -1.03
SRRM1-219ENST00000495561 AP4E1Q9UPM8 1137 aa8.59□□□□□ -1.03
SRRM1-219ENST00000495561 ARHGAP4P98171 946 aa8.58□□□□□ -1.04
SRRM1-219ENST00000495561 DUSP27Q5VZP5 1158 aa8.58□□□□□ -1.04
SRRM1-219ENST00000495561 ZNF765Q7L2R6 523 aa8.58□□□□□ -1.04
SRRM1-219ENST00000495561 TP53INP2Q8IXH6 220 aa8.58□□□□□ -1.04
SRRM1-219ENST00000495561 NPHS2Q9NP85 383 aa8.58□□□□□ -1.04
SRRM1-219ENST00000495561 USTQ9Y2C2 406 aa8.58□□□□□ -1.04
SRRM1-219ENST00000495561 NDUFB5O43674 189 aa8.57□□□□□ -1.04
SRRM1-219ENST00000495561 CPNE3O75131 537 aaKnown RBP8.57□□□□□ -1.04
SRRM1-219ENST00000495561 ASPAP45381 313 aa8.57□□□□□ -1.04
SRRM1-219ENST00000495561 CYP27A1Q02318 531 aa8.57□□□□□ -1.04
SRRM1-219ENST00000495561 COL19A1Q14993 1142 aa8.57□□□□□ -1.04
SRRM1-219ENST00000495561 B4GALNT3Q6L9W6 998 aa8.57□□□□□ -1.04
SRRM1-219ENST00000495561 SEZ6L2Q6UXD5 910 aa8.57□□□□□ -1.04
SRRM1-219ENST00000495561 FAM129BQ96TA1 746 aa8.57□□□□□ -1.04
SRRM1-219ENST00000495561 LRRC4CQ9HCJ2 640 aa8.57□□□□□ -1.04
SRRM1-219ENST00000495561 ZC3H7BQ9UGR2 993 aaKnown RBP8.57□□□□□ -1.04
SRRM1-219ENST00000495561 DYNC1LI2O43237 492 aaPredicted RBP8.56□□□□□ -1.04
SRRM1-219ENST00000495561 AOC2O75106 756 aa8.56□□□□□ -1.04
SRRM1-219ENST00000495561 WDR18Q9BV38 432 aa8.56□□□□□ -1.04
SRRM1-219ENST00000495561 C1GALT1Q9NS00 363 aa8.56□□□□□ -1.04
SRRM1-219ENST00000495561 PDE3BQ13370 1112 aa8.55□□□□□ -1.04
SRRM1-219ENST00000495561 PDE3AQ14432 1141 aa8.55□□□□□ -1.04
SRRM1-219ENST00000495561 FLCNQ8NFG4 579 aa8.55□□□□□ -1.04
SRRM1-219ENST00000495561 ABCB6Q9NP58 842 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms