RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 IQCA1LA6NCM1 817 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 SEMA3EO15041 775 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 TAF5LO75529 589 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 PDIA4P13667 645 aaKnown RBP12.22□□□□□ -0.45
HDAC3-214ENST00000495485 RPS12P25398 132 aaKnown RBP12.22□□□□□ -0.45
HDAC3-214ENST00000495485 ZAP70P43403 619 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 NUCB2P80303 420 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 PTH1RQ03431 593 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 AOC3Q16853 763 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 CREB3L3Q68CJ9 461 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 SPRYD3Q8NCJ5 442 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 EDC3Q96F86 508 aaKnown RBP12.22□□□□□ -0.45
HDAC3-214ENST00000495485 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
HDAC3-214ENST00000495485 L3MBTL3Q96JM7 780 aaPredicted RBP12.22□□□□□ -0.45
HDAC3-214ENST00000495485 ANTXR1Q9H6X2 564 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 WDR90Q96KV7 1748 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 MYO3BQ8WXR4 1341 aa12.21□□□□□ -0.45
HDAC3-214ENST00000495485 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.45
HDAC3-214ENST00000495485 UBE3CQ15386 1083 aa12.21□□□□□ -0.45
HDAC3-214ENST00000495485 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
HDAC3-214ENST00000495485 BLOC1S2Q6QNY1 142 aa12.21□□□□□ -0.45
HDAC3-214ENST00000495485 SPATA5Q8NB90 893 aa12.21□□□□□ -0.45
HDAC3-214ENST00000495485 HELBQ8NG08 1087 aaPredicted RBP12.21□□□□□ -0.45
HDAC3-214ENST00000495485 JAKMIP1Q96N16 626 aaKnown RBP12.21□□□□□ -0.45
HDAC3-214ENST00000495485 SH2B1Q9NRF2 756 aaPredicted RBP12.21□□□□□ -0.45
HDAC3-214ENST00000495485 DENND2AQ9ULE3 1009 aa12.21□□□□□ -0.45
HDAC3-214ENST00000495485 SLC27A2O14975 620 aa12.2□□□□□ -0.46
HDAC3-214ENST00000495485 MCAMP43121 646 aa12.2□□□□□ -0.46
HDAC3-214ENST00000495485 FKBP1AP62942 108 aaKnown RBP12.2□□□□□ -0.46
HDAC3-214ENST00000495485 CIAPIN1Q6FI81 312 aa12.2□□□□□ -0.46
HDAC3-214ENST00000495485 RUFY3Q7L099 469 aa12.2□□□□□ -0.46
HDAC3-214ENST00000495485 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
HDAC3-214ENST00000495485 IL25Q9H293 177 aa12.2□□□□□ -0.46
HDAC3-214ENST00000495485 ALDH8A1Q9H2A2 487 aaPredicted RBP12.2□□□□□ -0.46
HDAC3-214ENST00000495485 ZSWIM6Q9HCJ5 1215 aa12.2□□□□□ -0.46
HDAC3-214ENST00000495485 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
HDAC3-214ENST00000495485 PALD1Q9ULE6 856 aa12.2□□□□□ -0.46
HDAC3-214ENST00000495485 LIMCH1Q9UPQ0 1083 aa12.2□□□□□ -0.46
HDAC3-214ENST00000495485 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.2□□□□□ -0.46
HDAC3-214ENST00000495485 AKAP11Q9UKA4 1901 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 GOLGA6L22H0YM25 854 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 ECE2O60344 883 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 FRAT2O75474 233 aaPredicted RBP12.19□□□□□ -0.46
HDAC3-214ENST00000495485 IL1R1P14778 569 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 PHKA1P46020 1223 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 PRELPP51888 382 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 NBR1Q14596 966 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 SLC9C2Q5TAH2 1124 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 STRIP1Q5VSL9 837 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 AGBL3Q8NEM8 1001 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 DPF2Q92785 391 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
HDAC3-214ENST00000495485 NDUFB9Q9Y6M9 179 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 SCN9AQ15858 1988 aa12.19□□□□□ -0.46
HDAC3-214ENST00000495485 IRS2Q9Y4H2 1338 aa12.18□□□□□ -0.46
HDAC3-214ENST00000495485 IDH1O75874 414 aaKnown RBP12.18□□□□□ -0.46
HDAC3-214ENST00000495485 VEGFAP15692 232 aaPredicted RBP12.18□□□□□ -0.46
HDAC3-214ENST00000495485 GNAT2P19087 354 aa12.18□□□□□ -0.46
HDAC3-214ENST00000495485 LMOD1P29536 600 aaPredicted RBP12.18□□□□□ -0.46
HDAC3-214ENST00000495485 HIBADHP31937 336 aaKnown RBP12.18□□□□□ -0.46
HDAC3-214ENST00000495485 ADD2P35612 726 aa12.18□□□□□ -0.46
HDAC3-214ENST00000495485 NFKBIBQ15653 356 aa12.18□□□□□ -0.46
HDAC3-214ENST00000495485 IMMTQ16891 758 aaKnown RBP12.18□□□□□ -0.46
HDAC3-214ENST00000495485 ZNF589Q86UQ0 364 aaPredicted RBP12.18□□□□□ -0.46
HDAC3-214ENST00000495485 TBC1D22AQ8WUA7 517 aa12.18□□□□□ -0.46
HDAC3-214ENST00000495485 TMX3Q96JJ7 454 aa12.18□□□□□ -0.46
HDAC3-214ENST00000495485 NEK1Q96PY6 1258 aa12.18□□□□□ -0.46
HDAC3-214ENST00000495485 LRP2BPQ9P2M1 347 aa12.18□□□□□ -0.46
HDAC3-214ENST00000495485 PDS5AQ29RF7 1337 aaKnown RBP12.17□□□□□ -0.46
HDAC3-214ENST00000495485 USP17L3A6NCW0 530 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 USP17L4A6NCW7 530 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 CD2BP2O95400 341 aaKnown RBP12.17□□□□□ -0.46
HDAC3-214ENST00000495485 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-214ENST00000495485 VIL1P09327 827 aaKnown RBP12.17□□□□□ -0.46
HDAC3-214ENST00000495485 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
HDAC3-214ENST00000495485 CXCL9Q07325 125 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 CUL4AQ13619 759 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 SPTY2D1Q68D10 685 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-214ENST00000495485 USP17L1Q7RTZ2 530 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 FBXO33Q7Z6M2 555 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-214ENST00000495485 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 ZGPATQ8N5A5 531 aaKnown RBP12.17□□□□□ -0.46
HDAC3-214ENST00000495485 AIDAQ96BJ3 306 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 UPF3BQ9BZI7 483 aaKnown RBP12.17□□□□□ -0.46
HDAC3-214ENST00000495485 CD209Q9NNX6 404 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 SUGT1Q9Y2Z0 365 aa12.17□□□□□ -0.46
HDAC3-214ENST00000495485 RPAP1Q9BWH6 1393 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-214ENST00000495485 MAST3O60307 1309 aa12.16□□□□□ -0.46
HDAC3-214ENST00000495485 BCAMP50895 628 aa12.16□□□□□ -0.46
HDAC3-214ENST00000495485 FGD1P98174 961 aa12.16□□□□□ -0.46
HDAC3-214ENST00000495485 SCARF1Q14162 830 aa12.16□□□□□ -0.46
HDAC3-214ENST00000495485 ZNF784Q8NCA9 323 aaPredicted RBP12.16□□□□□ -0.46
HDAC3-214ENST00000495485 FAM84BQ96KN1 310 aaPredicted RBP12.16□□□□□ -0.46
HDAC3-214ENST00000495485 TTC14Q96N46 770 aa12.16□□□□□ -0.46
HDAC3-214ENST00000495485 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
HDAC3-214ENST00000495485 DBNDD1Q9H9R9 158 aa12.16□□□□□ -0.46
HDAC3-214ENST00000495485 COL4A5P29400 1685 aa12.16□□□□□ -0.46
HDAC3-214ENST00000495485 DOCK2Q92608 1830 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms