RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 COL1A1P02452 1464 aaPredicted RBP18.26■□□□□ 0.51
RAPGEF3-214ENST00000495465 IPO8O15397 1037 aaKnown RBP18.25■□□□□ 0.51
RAPGEF3-214ENST00000495465 DGKZQ13574 1117 aa18.25■□□□□ 0.51
RAPGEF3-214ENST00000495465 SLC10A4Q96EP9 437 aa18.25■□□□□ 0.51
RAPGEF3-214ENST00000495465 MCOLN1Q9GZU1 580 aa18.25■□□□□ 0.51
RAPGEF3-214ENST00000495465 TNNQ9UQP3 1299 aa18.25■□□□□ 0.51
RAPGEF3-214ENST00000495465 TCP10L2B9ZVM9 353 aa18.24■□□□□ 0.51
RAPGEF3-214ENST00000495465 CIAO1O76071 339 aa18.24■□□□□ 0.51
RAPGEF3-214ENST00000495465 CLMNQ96JQ2 1002 aa18.24■□□□□ 0.51
RAPGEF3-214ENST00000495465 FBXO3Q9UK99 471 aa18.24■□□□□ 0.51
RAPGEF3-214ENST00000495465 CASP8AP2Q9UKL3 1982 aa18.24■□□□□ 0.51
RAPGEF3-214ENST00000495465 CCDC85CA6NKD9 419 aa18.23■□□□□ 0.51
RAPGEF3-214ENST00000495465 GNAI3P08754 354 aa18.23■□□□□ 0.51
RAPGEF3-214ENST00000495465 TRIM27P14373 513 aa18.23■□□□□ 0.51
RAPGEF3-214ENST00000495465 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
RAPGEF3-214ENST00000495465 ATP2B3Q16720 1220 aa18.23■□□□□ 0.51
RAPGEF3-214ENST00000495465 TEKT1Q969V4 418 aa18.23■□□□□ 0.51
RAPGEF3-214ENST00000495465 CLUAP1Q96AJ1 413 aa18.23■□□□□ 0.51
RAPGEF3-214ENST00000495465 SSC5DA1L4H1 1573 aa18.22■□□□□ 0.51
RAPGEF3-214ENST00000495465 USP2O75604 605 aaPredicted RBP18.22■□□□□ 0.51
RAPGEF3-214ENST00000495465 IL15P40933 162 aaPredicted RBP18.22■□□□□ 0.51
RAPGEF3-214ENST00000495465 TM4SF4P48230 202 aa18.22■□□□□ 0.51
RAPGEF3-214ENST00000495465 HDLBPQ00341 1268 aaKnown RBP18.22■□□□□ 0.51
RAPGEF3-214ENST00000495465 MAP3K11Q16584 847 aa18.22■□□□□ 0.51
RAPGEF3-214ENST00000495465 SPRYD7Q5W111 196 aa18.22■□□□□ 0.51
RAPGEF3-214ENST00000495465 ATF7IPQ6VMQ6 1270 aa18.22■□□□□ 0.51
RAPGEF3-214ENST00000495465 TBC1D8O95759 1140 aa18.21■□□□□ 0.51
RAPGEF3-214ENST00000495465 IREB2P48200 963 aaKnown RBP18.21■□□□□ 0.51
RAPGEF3-214ENST00000495465 CACNB3P54284 484 aa18.21■□□□□ 0.51
RAPGEF3-214ENST00000495465 SREBF2Q12772 1141 aa18.21■□□□□ 0.51
RAPGEF3-214ENST00000495465 CDAN1Q8IWY9 1227 aa18.21■□□□□ 0.51
RAPGEF3-214ENST00000495465 WDR66Q8TBY9 1149 aa18.21■□□□□ 0.51
RAPGEF3-214ENST00000495465 TMEM39BQ9GZU3 492 aa18.21■□□□□ 0.51
RAPGEF3-214ENST00000495465 COPRSQ9NQ92 184 aa18.21■□□□□ 0.51
RAPGEF3-214ENST00000495465 SRGAP3O43295 1099 aa18.2■□□□□ 0.5
RAPGEF3-214ENST00000495465 TNNI2P48788 182 aa18.2■□□□□ 0.5
RAPGEF3-214ENST00000495465 GNL3LQ9NVN8 582 aaKnown RBP18.2■□□□□ 0.5
RAPGEF3-214ENST00000495465 SUGT1Q9Y2Z0 365 aa18.2■□□□□ 0.5
RAPGEF3-214ENST00000495465 ADORA1P30542 326 aa18.19■□□□□ 0.5
RAPGEF3-214ENST00000495465 APOBEC3HQ6NTF7 200 aaKnown RBP18.19■□□□□ 0.5
RAPGEF3-214ENST00000495465 WNK4Q96J92 1243 aa18.19■□□□□ 0.5
RAPGEF3-214ENST00000495465 ZDHHC15Q96MV8 337 aa18.19■□□□□ 0.5
RAPGEF3-214ENST00000495465 TEPSINQ96N21 525 aa18.19■□□□□ 0.5
RAPGEF3-214ENST00000495465 MRIQ9BWK5 157 aa18.19■□□□□ 0.5
RAPGEF3-214ENST00000495465 MAST3O60307 1309 aa18.19■□□□□ 0.5
RAPGEF3-214ENST00000495465 GNAI2P04899 355 aa18.18■□□□□ 0.5
RAPGEF3-214ENST00000495465 PHKA1P46020 1223 aa18.18■□□□□ 0.5
RAPGEF3-214ENST00000495465 TIMM10P62072 90 aa18.18■□□□□ 0.5
RAPGEF3-214ENST00000495465 TMOD2Q9NZR1 351 aa18.18■□□□□ 0.5
RAPGEF3-214ENST00000495465 MANSC4A6NHS7 340 aaPredicted RBP18.17■□□□□ 0.5
RAPGEF3-214ENST00000495465 UNCXA6NJT0 531 aa18.17■□□□□ 0.5
RAPGEF3-214ENST00000495465 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
RAPGEF3-214ENST00000495465 HHIPL2Q6UWX4 724 aa18.17■□□□□ 0.5
RAPGEF3-214ENST00000495465 ANKRD13AQ8IZ07 590 aa18.17■□□□□ 0.5
RAPGEF3-214ENST00000495465 TMEM57Q8N5G2 664 aa18.17■□□□□ 0.5
RAPGEF3-214ENST00000495465 ELP3Q9H9T3 547 aa18.17■□□□□ 0.5
RAPGEF3-214ENST00000495465 AKAP11Q9UKA4 1901 aa18.16■□□□□ 0.5
RAPGEF3-214ENST00000495465 ZBTB48P10074 688 aaPredicted RBP18.16■□□□□ 0.5
RAPGEF3-214ENST00000495465 PRDX5P30044 214 aa18.16■□□□□ 0.5
RAPGEF3-214ENST00000495465 TFCP2Q12800 502 aa18.16■□□□□ 0.5
RAPGEF3-214ENST00000495465 MTX1Q13505 466 aa18.16■□□□□ 0.5
RAPGEF3-214ENST00000495465 ZNF296Q8WUU4 475 aaPredicted RBP18.16■□□□□ 0.5
RAPGEF3-214ENST00000495465 R3HDMLQ9H3Y0 253 aa18.16■□□□□ 0.5
RAPGEF3-214ENST00000495465 DENND2AQ9ULE3 1009 aa18.16■□□□□ 0.5
RAPGEF3-214ENST00000495465 ECM29Q5VYK3 1845 aa18.15■□□□□ 0.5
RAPGEF3-214ENST00000495465 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
RAPGEF3-214ENST00000495465 GJA5P36382 358 aa18.15■□□□□ 0.5
RAPGEF3-214ENST00000495465 INHBEP58166 350 aa18.15■□□□□ 0.5
RAPGEF3-214ENST00000495465 DIXDC1Q155Q3 683 aa18.15■□□□□ 0.5
RAPGEF3-214ENST00000495465 CCDC102BQ68D86 513 aa18.15■□□□□ 0.5
RAPGEF3-214ENST00000495465 CTU1Q7Z7A3 348 aaKnown RBP18.15■□□□□ 0.5
RAPGEF3-214ENST00000495465 A0A1B0GUL7 405 aa18.14■□□□□ 0.49
RAPGEF3-214ENST00000495465 GPR25O00155 361 aa18.14■□□□□ 0.49
RAPGEF3-214ENST00000495465 MAP3K9P80192 1104 aa18.14■□□□□ 0.49
RAPGEF3-214ENST00000495465 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.14■□□□□ 0.49
RAPGEF3-214ENST00000495465 IFNL1Q8IU54 200 aa18.14■□□□□ 0.49
RAPGEF3-214ENST00000495465 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
RAPGEF3-214ENST00000495465 DAGLAQ9Y4D2 1042 aa18.14■□□□□ 0.49
RAPGEF3-214ENST00000495465 ARAP2Q8WZ64 1704 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 PNMA6EA0A0J9YXQ4 647 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 SEMA3EO15041 775 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 ALDH1A1P00352 501 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 FKBP1CQ5VVH2 108 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 CDC42EP5Q6NZY7 148 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 FAM83AQ86UY5 434 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 OPTNQ96CV9 577 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 XAGE2Q96GT9 111 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 NEUROD6Q96NK8 337 aa18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.13■□□□□ 0.49
RAPGEF3-214ENST00000495465 IGF2BP3O00425 579 aaKnown RBP eCLIP18.12■□□□□ 0.49
RAPGEF3-214ENST00000495465 G3BP1Q13283 466 aaKnown RBP eCLIP18.12■□□□□ 0.49
RAPGEF3-214ENST00000495465 RASGRF1Q13972 1273 aa18.12■□□□□ 0.49
RAPGEF3-214ENST00000495465 VGLL4Q14135 290 aa18.12■□□□□ 0.49
RAPGEF3-214ENST00000495465 FTSJ3Q8IY81 847 aaKnown RBP18.12■□□□□ 0.49
RAPGEF3-214ENST00000495465 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.12■□□□□ 0.49
RAPGEF3-214ENST00000495465 CSADQ9Y600 493 aa18.12■□□□□ 0.49
RAPGEF3-214ENST00000495465 TCP10Q12799 353 aa18.11■□□□□ 0.49
RAPGEF3-214ENST00000495465 MVPQ14764 893 aaKnown RBP18.11■□□□□ 0.49
RAPGEF3-214ENST00000495465 USP40Q9NVE5 1235 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms