RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 IGF2BP3O00425 579 aaKnown RBP eCLIP18.53■□□□□ 0.56
PTPN18-216ENST00000495400 FRAT2O75474 233 aaPredicted RBP18.53■□□□□ 0.56
PTPN18-216ENST00000495400 PDE8BO95263 885 aa18.53■□□□□ 0.56
PTPN18-216ENST00000495400 CHAF1AQ13111 956 aaPredicted RBP18.53■□□□□ 0.56
PTPN18-216ENST00000495400 OTUD7BQ6GQQ9 843 aa18.53■□□□□ 0.56
PTPN18-216ENST00000495400 VGLL2Q8N8G2 317 aa18.53■□□□□ 0.56
PTPN18-216ENST00000495400 TBC1D22AQ8WUA7 517 aa18.53■□□□□ 0.56
PTPN18-216ENST00000495400 SSH1Q8WYL5 1049 aa18.53■□□□□ 0.56
PTPN18-216ENST00000495400 USP44Q9H0E7 712 aa18.53■□□□□ 0.56
PTPN18-216ENST00000495400 TNRC18O15417 2968 aaPredicted RBP18.52■□□□□ 0.56
PTPN18-216ENST00000495400 TCP10L2B9ZVM9 353 aa18.52■□□□□ 0.56
PTPN18-216ENST00000495400 GJA5P36382 358 aa18.52■□□□□ 0.56
PTPN18-216ENST00000495400 TNNI2P48788 182 aa18.52■□□□□ 0.56
PTPN18-216ENST00000495400 HDLBPQ00341 1268 aaKnown RBP18.52■□□□□ 0.56
PTPN18-216ENST00000495400 TEPSINQ96N21 525 aa18.52■□□□□ 0.56
PTPN18-216ENST00000495400 SLC34A2O95436 690 aa18.51■□□□□ 0.55
PTPN18-216ENST00000495400 SLFN5Q08AF3 891 aa18.51■□□□□ 0.55
PTPN18-216ENST00000495400 GRIK5Q16478 980 aa18.51■□□□□ 0.55
PTPN18-216ENST00000495400 KLHDC4Q8TBB5 520 aa18.51■□□□□ 0.55
PTPN18-216ENST00000495400 BCAMP50895 628 aa18.5■□□□□ 0.55
PTPN18-216ENST00000495400 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
PTPN18-216ENST00000495400 TMEM39BQ9GZU3 492 aa18.5■□□□□ 0.55
PTPN18-216ENST00000495400 ELP3Q9H9T3 547 aa18.5■□□□□ 0.55
PTPN18-216ENST00000495400 TESPA1A2RU30 521 aaPredicted RBP18.49■□□□□ 0.55
PTPN18-216ENST00000495400 IFIT1P09914 478 aaKnown RBP18.49■□□□□ 0.55
PTPN18-216ENST00000495400 CDAN1Q8IWY9 1227 aa18.49■□□□□ 0.55
PTPN18-216ENST00000495400 TEKT1Q969V4 418 aa18.49■□□□□ 0.55
PTPN18-216ENST00000495400 OPTNQ96CV9 577 aa18.49■□□□□ 0.55
PTPN18-216ENST00000495400 MRIQ9BWK5 157 aa18.49■□□□□ 0.55
PTPN18-216ENST00000495400 MYH13Q9UKX3 1938 aa18.49■□□□□ 0.55
PTPN18-216ENST00000495400 KIF16BQ96L93 1317 aa18.49■□□□□ 0.55
PTPN18-216ENST00000495400 FGFR2P21802 821 aa18.48■□□□□ 0.55
PTPN18-216ENST00000495400 MAP3K9P80192 1104 aa18.48■□□□□ 0.55
PTPN18-216ENST00000495400 PUM3Q15397 648 aaKnown RBP18.48■□□□□ 0.55
PTPN18-216ENST00000495400 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.48■□□□□ 0.55
PTPN18-216ENST00000495400 ERO1AQ96HE7 468 aa18.48■□□□□ 0.55
PTPN18-216ENST00000495400 PTPN18Q99952 460 aa18.48■□□□□ 0.55
PTPN18-216ENST00000495400 TRIM17Q9Y577 477 aa18.48■□□□□ 0.55
PTPN18-216ENST00000495400 EYA2O00167 538 aa18.47■□□□□ 0.55
PTPN18-216ENST00000495400 RFX5P48382 616 aaPredicted RBP18.47■□□□□ 0.55
PTPN18-216ENST00000495400 CRHR2Q13324 411 aa18.47■□□□□ 0.55
PTPN18-216ENST00000495400 OTOP1Q7RTM1 612 aa18.47■□□□□ 0.55
PTPN18-216ENST00000495400 ZDHHC15Q96MV8 337 aa18.47■□□□□ 0.55
PTPN18-216ENST00000495400 SUGT1Q9Y2Z0 365 aa18.47■□□□□ 0.55
PTPN18-216ENST00000495400 MAST3O60307 1309 aa18.47■□□□□ 0.55
PTPN18-216ENST00000495400 CACNB3P54284 484 aa18.46■□□□□ 0.55
PTPN18-216ENST00000495400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.46■□□□□ 0.55
PTPN18-216ENST00000495400 MS4A4AQ96JQ5 239 aa18.46■□□□□ 0.55
PTPN18-216ENST00000495400 SMC4Q9NTJ3 1288 aa18.46■□□□□ 0.55
PTPN18-216ENST00000495400 TMOD2Q9NZR1 351 aa18.46■□□□□ 0.55
PTPN18-216ENST00000495400 CSADQ9Y600 493 aa18.46■□□□□ 0.55
PTPN18-216ENST00000495400 SLC5A1P13866 664 aa18.45■□□□□ 0.54
PTPN18-216ENST00000495400 VGLL4Q14135 290 aa18.45■□□□□ 0.54
PTPN18-216ENST00000495400 CD99L2Q8TCZ2 262 aa18.45■□□□□ 0.54
PTPN18-216ENST00000495400 LPIN2Q92539 896 aa18.45■□□□□ 0.54
PTPN18-216ENST00000495400 CDCA7LQ96GN5 454 aa18.45■□□□□ 0.54
PTPN18-216ENST00000495400 GTF2A2P52657 109 aa18.44■□□□□ 0.54
PTPN18-216ENST00000495400 SP3Q02447 781 aa18.44■□□□□ 0.54
PTPN18-216ENST00000495400 FKBP1CQ5VVH2 108 aa18.44■□□□□ 0.54
PTPN18-216ENST00000495400 APOBEC3HQ6NTF7 200 aaKnown RBP18.44■□□□□ 0.54
PTPN18-216ENST00000495400 HHIPL2Q6UWX4 724 aa18.44■□□□□ 0.54
PTPN18-216ENST00000495400 FAM83AQ86UY5 434 aa18.44■□□□□ 0.54
PTPN18-216ENST00000495400 TRMT2AQ8IZ69 625 aaKnown RBP18.44■□□□□ 0.54
PTPN18-216ENST00000495400 WDR66Q8TBY9 1149 aa18.44■□□□□ 0.54
PTPN18-216ENST00000495400 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
PTPN18-216ENST00000495400 BRI3BPQ8WY22 251 aa18.44■□□□□ 0.54
PTPN18-216ENST00000495400 CCL15-CCL14A0A0B4J2E2 113 aa18.43■□□□□ 0.54
PTPN18-216ENST00000495400 CCL15Q16663 113 aa18.43■□□□□ 0.54
PTPN18-216ENST00000495400 ATG9AQ7Z3C6 839 aa18.43■□□□□ 0.54
PTPN18-216ENST00000495400 HOOK2Q96ED9 719 aa18.43■□□□□ 0.54
PTPN18-216ENST00000495400 OTUD5Q96G74 571 aa18.43■□□□□ 0.54
PTPN18-216ENST00000495400 PTPN22Q9Y2R2 807 aa18.43■□□□□ 0.54
PTPN18-216ENST00000495400 UBTFL1P0CB47 393 aaPredicted RBP18.42■□□□□ 0.54
PTPN18-216ENST00000495400 TAF1CQ15572 869 aaPredicted RBP18.42■□□□□ 0.54
PTPN18-216ENST00000495400 PRPF38BQ5VTL8 546 aaKnown RBP18.42■□□□□ 0.54
PTPN18-216ENST00000495400 INTS3Q68E01 1043 aaKnown RBP18.42■□□□□ 0.54
PTPN18-216ENST00000495400 EFCC1Q9HA90 598 aa18.42■□□□□ 0.54
PTPN18-216ENST00000495400 FBXO3Q9UK99 471 aa18.42■□□□□ 0.54
PTPN18-216ENST00000495400 AK9Q5TCS8 1911 aa18.41■□□□□ 0.54
PTPN18-216ENST00000495400 SPDYE5A6NIY4 337 aa18.41■□□□□ 0.54
PTPN18-216ENST00000495400 CT47B1P0C2W7 299 aaPredicted RBP18.41■□□□□ 0.54
PTPN18-216ENST00000495400 ZFYVE28Q9HCC9 887 aa18.41■□□□□ 0.54
PTPN18-216ENST00000495400 CEP126Q9P2H0 1117 aa18.41■□□□□ 0.54
PTPN18-216ENST00000495400 SNCAIPQ9Y6H5 919 aa18.41■□□□□ 0.54
PTPN18-216ENST00000495400 RPAP1Q9BWH6 1393 aaPredicted RBP18.41■□□□□ 0.54
PTPN18-216ENST00000495400 CIAO1O76071 339 aa18.4■□□□□ 0.54
PTPN18-216ENST00000495400 ATP2B3Q16720 1220 aa18.4■□□□□ 0.54
PTPN18-216ENST00000495400 DCAF15Q66K64 600 aa18.4■□□□□ 0.54
PTPN18-216ENST00000495400 ERO1BQ86YB8 467 aa18.4■□□□□ 0.54
PTPN18-216ENST00000495400 WRNIP1Q96S55 665 aa18.4■□□□□ 0.54
PTPN18-216ENST00000495400 SIL1Q9H173 461 aa18.4■□□□□ 0.54
PTPN18-216ENST00000495400 NOB1Q9ULX3 412 aaKnown RBP18.4■□□□□ 0.54
PTPN18-216ENST00000495400 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
PTPN18-216ENST00000495400 CETPP11597 493 aa18.39■□□□□ 0.53
PTPN18-216ENST00000495400 ARHGEF6Q15052 776 aa18.39■□□□□ 0.53
PTPN18-216ENST00000495400 FAM43AQ8N2R8 423 aa18.39■□□□□ 0.53
PTPN18-216ENST00000495400 FAM151AQ8WW52 585 aa18.39■□□□□ 0.53
PTPN18-216ENST00000495400 ZKSCAN4Q969J2 545 aaPredicted RBP18.39■□□□□ 0.53
PTPN18-216ENST00000495400 API5Q9BZZ5 524 aaKnown RBP18.39■□□□□ 0.53
PTPN18-216ENST00000495400 GNL3LQ9NVN8 582 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms