RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 FAM229AH3BQW9 127 aa9.53□□□□□ -0.88
VPS8-226ENST00000495190 GSTM4Q03013 218 aa9.53□□□□□ -0.88
VPS8-226ENST00000495190 PPP2R3AQ06190 1150 aa9.53□□□□□ -0.88
VPS8-226ENST00000495190 RAD51AP2Q09MP3 1159 aa9.53□□□□□ -0.88
VPS8-226ENST00000495190 FOXD4L6Q3SYB3 417 aaPredicted RBP9.53□□□□□ -0.88
VPS8-226ENST00000495190 FOXD4L3Q6VB84 417 aaPredicted RBP9.53□□□□□ -0.88
VPS8-226ENST00000495190 PDZD3Q86UT5 571 aa9.53□□□□□ -0.88
VPS8-226ENST00000495190 DDX3YO15523 660 aaKnown RBP9.52□□□□□ -0.89
VPS8-226ENST00000495190 NME2P22392 152 aa9.52□□□□□ -0.89
VPS8-226ENST00000495190 COL8A1P27658 744 aa9.52□□□□□ -0.89
VPS8-226ENST00000495190 SUZ12Q15022 739 aaKnown RBP9.52□□□□□ -0.89
VPS8-226ENST00000495190 HS2ST1Q7LGA3 356 aa9.52□□□□□ -0.89
VPS8-226ENST00000495190 NT5DC4Q86YG4 428 aa9.52□□□□□ -0.89
VPS8-226ENST00000495190 GGT7Q9UJ14 662 aa9.52□□□□□ -0.89
VPS8-226ENST00000495190 PIK3R2O00459 728 aa9.51□□□□□ -0.89
VPS8-226ENST00000495190 ECEL1O95672 775 aa9.51□□□□□ -0.89
VPS8-226ENST00000495190 CTSBP07858 339 aa9.51□□□□□ -0.89
VPS8-226ENST00000495190 CD68P34810 354 aaPredicted RBP9.51□□□□□ -0.89
VPS8-226ENST00000495190 ARL4DP49703 201 aa9.51□□□□□ -0.89
VPS8-226ENST00000495190 LIG3P49916 1009 aa9.51□□□□□ -0.89
VPS8-226ENST00000495190 ZNF252P-AS1Q0IIN9 211 aa9.51□□□□□ -0.89
VPS8-226ENST00000495190 PCNX4Q63HM2 1172 aa9.51□□□□□ -0.89
VPS8-226ENST00000495190 SULF2Q8IWU5 870 aa9.51□□□□□ -0.89
VPS8-226ENST00000495190 F6X3S4 739 aa9.5□□□□□ -0.89
VPS8-226ENST00000495190 ARNTP27540 789 aa9.5□□□□□ -0.89
VPS8-226ENST00000495190 RAC1P63000 192 aa9.5□□□□□ -0.89
VPS8-226ENST00000495190 RACK1P63244 317 aaKnown RBP9.5□□□□□ -0.89
VPS8-226ENST00000495190 TRIM28Q13263 835 aaKnown RBP9.5□□□□□ -0.89
VPS8-226ENST00000495190 MAP3K11Q16584 847 aa9.5□□□□□ -0.89
VPS8-226ENST00000495190 AGMOQ6ZNB7 445 aa9.5□□□□□ -0.89
VPS8-226ENST00000495190 PODNQ7Z5L7 613 aa9.5□□□□□ -0.89
VPS8-226ENST00000495190 PHC3Q8NDX5 983 aa9.5□□□□□ -0.89
VPS8-226ENST00000495190 KBTBD4Q9NVX7 518 aa9.5□□□□□ -0.89
VPS8-226ENST00000495190 NLRP12P59046 1061 aa9.49□□□□□ -0.89
VPS8-226ENST00000495190 AP3B2Q13367 1082 aa9.49□□□□□ -0.89
VPS8-226ENST00000495190 ZNF394Q53GI3 561 aa9.49□□□□□ -0.89
VPS8-226ENST00000495190 TTBK2Q6IQ55 1244 aa9.49□□□□□ -0.89
VPS8-226ENST00000495190 GRIN3AQ8TCU5 1115 aa9.49□□□□□ -0.89
VPS8-226ENST00000495190 SCARF2Q96GP6 870 aaPredicted RBP9.49□□□□□ -0.89
VPS8-226ENST00000495190 RHOVQ96L33 236 aa9.49□□□□□ -0.89
VPS8-226ENST00000495190 TMEM74Q96NL1 305 aa9.49□□□□□ -0.89
VPS8-226ENST00000495190 CACNA2D2Q9NY47 1150 aa9.49□□□□□ -0.89
VPS8-226ENST00000495190 NOP53Q9NZM5 478 aaKnown RBP9.49□□□□□ -0.89
VPS8-226ENST00000495190 DDX41Q9UJV9 622 aaKnown RBP9.49□□□□□ -0.89
VPS8-226ENST00000495190 TLR6Q9Y2C9 796 aa9.49□□□□□ -0.89
VPS8-226ENST00000495190 LOC100289279A0A1B0GTE1 492 aa9.48□□□□□ -0.89
VPS8-226ENST00000495190 SPDYE3A6NKU9 549 aa9.48□□□□□ -0.89
VPS8-226ENST00000495190 DLGAP3O95886 979 aa9.48□□□□□ -0.89
VPS8-226ENST00000495190 RLBP1P12271 317 aa9.48□□□□□ -0.89
VPS8-226ENST00000495190 ELNP15502 786 aa9.48□□□□□ -0.89
VPS8-226ENST00000495190 RPS26P62854 115 aaKnown RBP9.48□□□□□ -0.89
VPS8-226ENST00000495190 MPRIPQ6WCQ1 1025 aa9.48□□□□□ -0.89
VPS8-226ENST00000495190 DDX54Q8TDD1 881 aaKnown RBP9.48□□□□□ -0.89
VPS8-226ENST00000495190 PCDHGB7Q9Y5F8 929 aa9.48□□□□□ -0.89
VPS8-226ENST00000495190 EIF4EBP3O60516 100 aaPredicted RBP9.47□□□□□ -0.89
VPS8-226ENST00000495190 WISP1O95388 367 aa9.47□□□□□ -0.89
VPS8-226ENST00000495190 CYP11A1P05108 521 aa9.47□□□□□ -0.89
VPS8-226ENST00000495190 GSTP1P09211 210 aaKnown RBP9.47□□□□□ -0.89
VPS8-226ENST00000495190 TFE3P19532 575 aaPredicted RBP9.47□□□□□ -0.89
VPS8-226ENST00000495190 MAOBP27338 520 aa9.47□□□□□ -0.89
VPS8-226ENST00000495190 POU4F3Q15319 338 aa9.47□□□□□ -0.89
VPS8-226ENST00000495190 GRIK4Q16099 956 aa9.47□□□□□ -0.89
VPS8-226ENST00000495190 USP48Q86UV5 1035 aa9.47□□□□□ -0.89
VPS8-226ENST00000495190 RELL1Q8IUW5 271 aa9.47□□□□□ -0.89
VPS8-226ENST00000495190 SELPP16109 830 aa9.46□□□□□ -0.9
VPS8-226ENST00000495190 GARTP22102 1010 aa9.46□□□□□ -0.9
VPS8-226ENST00000495190 IGF2-ASQ6U949 168 aa9.46□□□□□ -0.9
VPS8-226ENST00000495190 SHISA2Q6UWI4 295 aa9.46□□□□□ -0.9
VPS8-226ENST00000495190 EMILIN2Q9BXX0 1053 aa9.46□□□□□ -0.9
VPS8-226ENST00000495190 CYP8B1Q9UNU6 501 aa9.46□□□□□ -0.9
VPS8-226ENST00000495190 SAMM50Q9Y512 469 aa9.46□□□□□ -0.9
VPS8-226ENST00000495190 PCDHB5Q9Y5E4 795 aa9.46□□□□□ -0.9
VPS8-226ENST00000495190 ERCC5P28715 1186 aaPredicted RBP9.45□□□□□ -0.9
VPS8-226ENST00000495190 GBP2P32456 591 aaPredicted RBP9.45□□□□□ -0.9
VPS8-226ENST00000495190 PWP1Q13610 501 aa9.45□□□□□ -0.9
VPS8-226ENST00000495190 PRRT3Q5FWE3 981 aa9.45□□□□□ -0.9
VPS8-226ENST00000495190 DCAF11Q8TEB1 546 aa9.45□□□□□ -0.9
VPS8-226ENST00000495190 UBASH3BQ8TF42 649 aa9.45□□□□□ -0.9
VPS8-226ENST00000495190 TGIF2Q9GZN2 237 aa9.45□□□□□ -0.9
VPS8-226ENST00000495190 KCNQ5Q9NR82 932 aa9.45□□□□□ -0.9
VPS8-226ENST00000495190 ADAMTS1Q9UHI8 967 aa9.45□□□□□ -0.9
VPS8-226ENST00000495190 MINDY4BA8MYZ0 360 aa9.44□□□□□ -0.9
VPS8-226ENST00000495190 PF4P02776 101 aa9.44□□□□□ -0.9
VPS8-226ENST00000495190 SPATA31C1P0DKV0 1188 aa9.44□□□□□ -0.9
VPS8-226ENST00000495190 LMNB2Q03252 620 aa9.44□□□□□ -0.9
VPS8-226ENST00000495190 PTPN11Q06124 597 aaPredicted RBP9.44□□□□□ -0.9
VPS8-226ENST00000495190 CAMK2GQ13555 558 aaPredicted RBP9.44□□□□□ -0.9
VPS8-226ENST00000495190 LLGL2Q6P1M3 1020 aa9.44□□□□□ -0.9
VPS8-226ENST00000495190 KIAA1211Q6ZU35 1233 aa9.44□□□□□ -0.9
VPS8-226ENST00000495190 USP26Q9BXU7 913 aa9.44□□□□□ -0.9
VPS8-226ENST00000495190 ZC3H12CQ9C0D7 883 aaKnown RBP9.44□□□□□ -0.9
VPS8-226ENST00000495190 CCDC86Q9H6F5 360 aaKnown RBP9.44□□□□□ -0.9
VPS8-226ENST00000495190 ZNF862O60290 1169 aa9.43□□□□□ -0.9
VPS8-226ENST00000495190 SCARA3Q6AZY7 606 aa9.43□□□□□ -0.9
VPS8-226ENST00000495190 GAL3ST3Q96A11 431 aa9.43□□□□□ -0.9
VPS8-226ENST00000495190 WDR89Q96FK6 387 aaPredicted RBP9.43□□□□□ -0.9
VPS8-226ENST00000495190 CORO1BQ9BR76 489 aa9.43□□□□□ -0.9
VPS8-226ENST00000495190 CBX8Q9HC52 389 aa9.43□□□□□ -0.9
VPS8-226ENST00000495190 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.43□□□□□ -0.9
VPS8-226ENST00000495190 FAM181BA6NEQ2 426 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms