RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 LDHBP07195 334 aaKnown RBP13.6□□□□□ -0.23
APTX-230ENST00000494649 NEFLP07196 543 aa13.6□□□□□ -0.23
APTX-230ENST00000494649 UQCRFS1P1P0C7P4 283 aa13.6□□□□□ -0.23
APTX-230ENST00000494649 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
APTX-230ENST00000494649 SMC1BQ8NDV3 1235 aa13.6□□□□□ -0.23
APTX-230ENST00000494649 PRMT6Q96LA8 375 aaPredicted RBP13.6□□□□□ -0.23
APTX-230ENST00000494649 GLIS2Q9BZE0 524 aaPredicted RBP13.6□□□□□ -0.23
APTX-230ENST00000494649 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
APTX-230ENST00000494649 CYP2E1P05181 493 aaPredicted RBP13.6□□□□□ -0.23
APTX-230ENST00000494649 CRKP46108 304 aa13.6□□□□□ -0.23
APTX-230ENST00000494649 DLGAP5Q15398 846 aa13.6□□□□□ -0.23
APTX-230ENST00000494649 CNTROBQ8N137 903 aa13.6□□□□□ -0.23
APTX-230ENST00000494649 GCC1Q96CN9 775 aa13.6□□□□□ -0.23
APTX-230ENST00000494649 RAI14Q9P0K7 980 aa13.6□□□□□ -0.23
APTX-230ENST00000494649 ADM5C9JUS6 153 aa13.59□□□□□ -0.23
APTX-230ENST00000494649 MAP4K4O95819 1239 aaPredicted RBP13.59□□□□□ -0.23
APTX-230ENST00000494649 CACNB3P54284 484 aa13.59□□□□□ -0.23
APTX-230ENST00000494649 FKBP1AP62942 108 aaKnown RBP13.59□□□□□ -0.23
APTX-230ENST00000494649 PRAMEF18Q5VWM3 479 aa13.59□□□□□ -0.23
APTX-230ENST00000494649 DZIP1Q86YF9 867 aaKnown RBP13.59□□□□□ -0.23
APTX-230ENST00000494649 RBM46Q8TBY0 533 aaKnown RBP13.59□□□□□ -0.23
APTX-230ENST00000494649 PIH1D3Q9NQM4 214 aaKnown RBP13.59□□□□□ -0.23
APTX-230ENST00000494649 LRP2BPQ9P2M1 347 aa13.59□□□□□ -0.23
APTX-230ENST00000494649 CEP350Q5VT06 3117 aa13.59□□□□□ -0.23
APTX-230ENST00000494649 HTRA3P83110 453 aa13.59□□□□□ -0.23
APTX-230ENST00000494649 TDRD3Q9H7E2 651 aaKnown RBP13.59□□□□□ -0.23
APTX-230ENST00000494649 ZNF408Q9H9D4 720 aa13.59□□□□□ -0.23
APTX-230ENST00000494649 VEZTQ9HBM0 779 aa13.59□□□□□ -0.23
APTX-230ENST00000494649 GOLIM4O00461 696 aa13.58□□□□□ -0.24
APTX-230ENST00000494649 IDH1O75874 414 aaKnown RBP13.58□□□□□ -0.24
APTX-230ENST00000494649 MECOMQ03112 1051 aa13.58□□□□□ -0.24
APTX-230ENST00000494649 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.24
APTX-230ENST00000494649 USP48Q86UV5 1035 aa13.58□□□□□ -0.24
APTX-230ENST00000494649 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
APTX-230ENST00000494649 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
APTX-230ENST00000494649 KRT26Q7Z3Y9 468 aa13.57□□□□□ -0.24
APTX-230ENST00000494649 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
APTX-230ENST00000494649 ZNF384Q8TF68 577 aa13.57□□□□□ -0.24
APTX-230ENST00000494649 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
APTX-230ENST00000494649 DCPSQ96C86 337 aaKnown RBP13.57□□□□□ -0.24
APTX-230ENST00000494649 AKAP11Q9UKA4 1901 aa13.57□□□□□ -0.24
APTX-230ENST00000494649 SALL1Q9NSC2 1324 aa13.56□□□□□ -0.24
APTX-230ENST00000494649 CHGBP05060 677 aa13.56□□□□□ -0.24
APTX-230ENST00000494649 SLFNL1Q499Z3 407 aa13.56□□□□□ -0.24
APTX-230ENST00000494649 SKAP1Q86WV1 359 aa13.56□□□□□ -0.24
APTX-230ENST00000494649 ZGPATQ8N5A5 531 aaKnown RBP13.56□□□□□ -0.24
APTX-230ENST00000494649 ZNF512BQ96KM6 892 aaPredicted RBP13.56□□□□□ -0.24
APTX-230ENST00000494649 ECHDC1Q9NTX5 307 aa13.56□□□□□ -0.24
APTX-230ENST00000494649 SERPINA10Q9UK55 444 aa13.56□□□□□ -0.24
APTX-230ENST00000494649 DAGLAQ9Y4D2 1042 aa13.56□□□□□ -0.24
APTX-230ENST00000494649 MYO5AQ9Y4I1 1855 aaKnown RBP13.56□□□□□ -0.24
APTX-230ENST00000494649 PCNTO95613 3336 aa13.56□□□□□ -0.24
APTX-230ENST00000494649 ITGBL1O95965 494 aaPredicted RBP13.55□□□□□ -0.24
APTX-230ENST00000494649 CHD1LQ86WJ1 897 aa13.55□□□□□ -0.24
APTX-230ENST00000494649 SULF1Q8IWU6 871 aa13.55□□□□□ -0.24
APTX-230ENST00000494649 POLR2AP24928 1970 aaKnown RBP13.55□□□□□ -0.24
APTX-230ENST00000494649 TCP10L2B9ZVM9 353 aa13.55□□□□□ -0.24
APTX-230ENST00000494649 MYO1BO43795 1136 aa13.55□□□□□ -0.24
APTX-230ENST00000494649 ATP5JP18859 108 aa13.55□□□□□ -0.24
APTX-230ENST00000494649 MX1P20591 662 aa13.55□□□□□ -0.24
APTX-230ENST00000494649 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
APTX-230ENST00000494649 ADGRA1Q86SQ6 560 aa13.55□□□□□ -0.24
APTX-230ENST00000494649 NSUN4Q96CB9 384 aaKnown RBP13.55□□□□□ -0.24
APTX-230ENST00000494649 ZBED3Q96IU2 234 aaPredicted RBP13.55□□□□□ -0.24
APTX-230ENST00000494649 MAST3O60307 1309 aa13.55□□□□□ -0.24
APTX-230ENST00000494649 PDS5AQ29RF7 1337 aaKnown RBP13.55□□□□□ -0.24
APTX-230ENST00000494649 NUCB1Q02818 461 aa13.54□□□□□ -0.24
APTX-230ENST00000494649 FSTL1Q12841 308 aa13.54□□□□□ -0.24
APTX-230ENST00000494649 SPTY2D1Q68D10 685 aaPredicted RBP13.54□□□□□ -0.24
APTX-230ENST00000494649 CDC37L1Q7L3B6 337 aa13.54□□□□□ -0.24
APTX-230ENST00000494649 ZC3H15Q8WU90 426 aaKnown RBP13.54□□□□□ -0.24
APTX-230ENST00000494649 GPATCH3Q96I76 525 aa13.54□□□□□ -0.24
APTX-230ENST00000494649 SUGT1Q9Y2Z0 365 aa13.54□□□□□ -0.24
APTX-230ENST00000494649 MAGEB6Q8N7X4 407 aa13.54□□□□□ -0.24
APTX-230ENST00000494649 ZDHHC15Q96MV8 337 aa13.54□□□□□ -0.24
APTX-230ENST00000494649 PAG1Q9NWQ8 432 aa13.54□□□□□ -0.24
APTX-230ENST00000494649 ZNF70Q9UC06 446 aaPredicted RBP13.54□□□□□ -0.24
APTX-230ENST00000494649 PGAP2Q9UHJ9 254 aa13.54□□□□□ -0.24
APTX-230ENST00000494649 FZD1Q9UP38 647 aa13.54□□□□□ -0.24
APTX-230ENST00000494649 BTDP43251 543 aa13.53□□□□□ -0.24
APTX-230ENST00000494649 PRKG1Q13976 671 aa13.53□□□□□ -0.24
APTX-230ENST00000494649 NAA16Q6N069 864 aaPredicted RBP13.53□□□□□ -0.24
APTX-230ENST00000494649 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
APTX-230ENST00000494649 MIGA1Q8NAN2 632 aa13.53□□□□□ -0.24
APTX-230ENST00000494649 HAUS7Q99871 368 aa13.53□□□□□ -0.24
APTX-230ENST00000494649 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.53□□□□□ -0.24
APTX-230ENST00000494649 TCP10Q12799 353 aa13.52□□□□□ -0.24
APTX-230ENST00000494649 HHIPL2Q6UWX4 724 aa13.52□□□□□ -0.24
APTX-230ENST00000494649 MTMR14Q8NCE2 650 aa13.52□□□□□ -0.24
APTX-230ENST00000494649 PI4K2BQ8TCG2 481 aa13.52□□□□□ -0.24
APTX-230ENST00000494649 CCDC136Q96JN2 1154 aa13.52□□□□□ -0.24
APTX-230ENST00000494649 AATFQ9NY61 560 aaKnown RBP eCLIP13.52□□□□□ -0.24
APTX-230ENST00000494649 MYH2Q9UKX2 1941 aa13.52□□□□□ -0.24
APTX-230ENST00000494649 CELF2O95319 508 aaKnown RBP13.52□□□□□ -0.25
APTX-230ENST00000494649 CYP7A1P22680 504 aa13.52□□□□□ -0.25
APTX-230ENST00000494649 NFIAQ12857 509 aa13.52□□□□□ -0.25
APTX-230ENST00000494649 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
APTX-230ENST00000494649 CDC42EP5Q6NZY7 148 aa13.52□□□□□ -0.25
APTX-230ENST00000494649 DEFB129Q9H1M3 183 aa13.52□□□□□ -0.25
APTX-230ENST00000494649 USP40Q9NVE5 1235 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms