RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TXNRD3Q86VQ6 643 aa8.13□□□□□ -1.11
MSH5-217ENST00000494458 ZNF384Q8TF68 577 aa8.13□□□□□ -1.11
MSH5-217ENST00000494458 SLC16A10Q8TF71 515 aa8.13□□□□□ -1.11
MSH5-217ENST00000494458 TMX3Q96JJ7 454 aa8.13□□□□□ -1.11
MSH5-217ENST00000494458 CWC22Q9HCG8 908 aaKnown RBP8.13□□□□□ -1.11
MSH5-217ENST00000494458 DAXXQ9UER7 740 aaPredicted RBP8.13□□□□□ -1.11
MSH5-217ENST00000494458 WWC3Q9ULE0 1092 aa8.13□□□□□ -1.11
MSH5-217ENST00000494458 ATP6V0A2Q9Y487 856 aa8.13□□□□□ -1.11
MSH5-217ENST00000494458 TAF6LQ9Y6J9 622 aa8.13□□□□□ -1.11
MSH5-217ENST00000494458 SNED1Q8TER0 1413 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 ZNF532Q9HCE3 1301 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 GPAA1O43292 621 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 RPS6KB1P23443 525 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 KLRK1P26718 216 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 ALDH1B1P30837 517 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 BAG6P46379 1132 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 COL9A3Q14050 684 aaPredicted RBP8.12□□□□□ -1.11
MSH5-217ENST00000494458 STYK1Q6J9G0 422 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 C7orf43Q8WVR3 580 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 RPGRQ92834 1020 aaKnown RBP8.12□□□□□ -1.11
MSH5-217ENST00000494458 MASTLQ96GX5 879 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 STK32BQ9NY57 414 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 CHMP5Q9NZZ3 219 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 CTNNA3Q9UI47 895 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 CYP46A1Q9Y6A2 500 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 PARP3Q9Y6F1 533 aa8.12□□□□□ -1.11
MSH5-217ENST00000494458 CACNA1SQ13698 1873 aa8.11□□□□□ -1.11
MSH5-217ENST00000494458 WDR19Q8NEZ3 1342 aa8.11□□□□□ -1.11
MSH5-217ENST00000494458 PATL2C9JE40 543 aaKnown RBP8.11□□□□□ -1.11
MSH5-217ENST00000494458 HMGB1P09429 215 aaKnown RBP8.11□□□□□ -1.11
MSH5-217ENST00000494458 GPSM2P81274 684 aa8.11□□□□□ -1.11
MSH5-217ENST00000494458 GIMAP6Q6P9H5 292 aa8.11□□□□□ -1.11
MSH5-217ENST00000494458 STOX1Q6ZVD7 989 aa8.11□□□□□ -1.11
MSH5-217ENST00000494458 TBC1D16Q8TBP0 767 aa8.11□□□□□ -1.11
MSH5-217ENST00000494458 ZSCAN31Q96LW9 406 aaPredicted RBP8.11□□□□□ -1.11
MSH5-217ENST00000494458 RIOK1Q9BRS2 568 aaKnown RBP8.11□□□□□ -1.11
MSH5-217ENST00000494458 UPF3BQ9BZI7 483 aaKnown RBP8.11□□□□□ -1.11
MSH5-217ENST00000494458 POLLQ9UGP5 575 aa8.11□□□□□ -1.11
MSH5-217ENST00000494458 LIMCH1Q9UPQ0 1083 aa8.11□□□□□ -1.11
MSH5-217ENST00000494458 MYH7P12883 1935 aa8.11□□□□□ -1.11
MSH5-217ENST00000494458 FAM205AQ6ZU69 1335 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 GSG1L2A8MUP6 293 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 IDH1O75874 414 aaKnown RBP8.1□□□□□ -1.11
MSH5-217ENST00000494458 FGRP09769 529 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 GNAT2P19087 354 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 CASTP20810 708 aaKnown RBP8.1□□□□□ -1.11
MSH5-217ENST00000494458 AK2P54819 239 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 PPP4CP60510 307 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 TOB2Q14106 344 aaPredicted RBP8.1□□□□□ -1.11
MSH5-217ENST00000494458 RAB3GAP1Q15042 981 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 DHX32Q7L7V1 743 aaKnown RBP8.1□□□□□ -1.11
MSH5-217ENST00000494458 NSUN4Q96CB9 384 aaKnown RBP8.1□□□□□ -1.11
MSH5-217ENST00000494458 JAKMIP1Q96N16 626 aaKnown RBP8.1□□□□□ -1.11
MSH5-217ENST00000494458 NEK1Q96PY6 1258 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 RTFDC1Q9BY42 306 aaPredicted RBP8.1□□□□□ -1.11
MSH5-217ENST00000494458 SH2B1Q9NRF2 756 aaPredicted RBP8.1□□□□□ -1.11
MSH5-217ENST00000494458 PDRG1Q9NUG6 133 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 ANAPC4Q9UJX5 808 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 DUOX1Q9NRD9 1551 aa8.1□□□□□ -1.11
MSH5-217ENST00000494458 MYO5AQ9Y4I1 1855 aaKnown RBP8.09□□□□□ -1.11
MSH5-217ENST00000494458 E7EWF7 191 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 ST3GAL1Q11201 340 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 ANKRD1Q15327 319 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 TTLL5Q6EMB2 1281 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 BLOC1S2Q6QNY1 142 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 DEFB132Q7Z7B7 95 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 ADGRA1Q86SQ6 560 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 SLC51AQ86UW1 340 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 IFNL3Q8IZI9 196 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 ZGPATQ8N5A5 531 aaKnown RBP8.09□□□□□ -1.11
MSH5-217ENST00000494458 MAGEB6Q8N7X4 407 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 WDR66Q8TBY9 1149 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 MTA3Q9BTC8 594 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 ANP32EQ9BTT0 268 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 NBPF3Q9H094 633 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 EPB41L4AQ9HCS5 686 aaPredicted RBP8.09□□□□□ -1.11
MSH5-217ENST00000494458 CD209Q9NNX6 404 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 ANKIB1Q9P2G1 1089 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 MKRN1Q9UHC7 482 aaKnown RBP8.09□□□□□ -1.11
MSH5-217ENST00000494458 GGA1Q9UJY5 639 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 C10orf71Q711Q0 1435 aa8.09□□□□□ -1.11
MSH5-217ENST00000494458 A0A0G2JLW4 131 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 PPEF1O14829 653 aaPredicted RBP8.08□□□□□ -1.12
MSH5-217ENST00000494458 NPHP1O15259 732 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 PDIA4P13667 645 aaKnown RBP8.08□□□□□ -1.12
MSH5-217ENST00000494458 CPA1P15085 419 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 KCNJ4P48050 445 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 SF3B2Q13435 895 aaKnown RBP8.08□□□□□ -1.12
MSH5-217ENST00000494458 NFKBIBQ15653 356 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 ME3Q16798 604 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 IMMTQ16891 758 aaKnown RBP8.08□□□□□ -1.12
MSH5-217ENST00000494458 GRIPAP1Q4V328 841 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 SPTY2D1Q68D10 685 aaPredicted RBP8.08□□□□□ -1.12
MSH5-217ENST00000494458 CC2D2BQ6DHV5 1058 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 ZNF804AQ7Z570 1209 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 MB21D2Q8IYB1 491 aaPredicted RBP8.08□□□□□ -1.12
MSH5-217ENST00000494458 KIF12Q96FN5 646 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 MRIQ9BWK5 157 aa8.08□□□□□ -1.12
MSH5-217ENST00000494458 COA1Q9GZY4 146 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms