RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 KCNQ5Q9NR82 932 aa6.08□□□□□ -1.44
CMSS1-207ENST00000494412 A0A096LPE4 126 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 A0A1W2PPZ6 126 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 CCDC85CA6NKD9 419 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 ENC1O14682 589 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 TLR3O15455 904 aaKnown RBP6.07□□□□□ -1.44
CMSS1-207ENST00000494412 KLF4O43474 513 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 LMNB1P20700 586 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 AMPD1P23109 780 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 ITPKAP23677 461 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 CRKP46108 304 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 SNRPNP63162 240 aaKnown RBP6.07□□□□□ -1.44
CMSS1-207ENST00000494412 NEUROD1Q13562 356 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 RAB33AQ14088 237 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 PCNX4Q63HM2 1172 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 AGMOQ6ZNB7 445 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 DHX32Q7L7V1 743 aaKnown RBP6.07□□□□□ -1.44
CMSS1-207ENST00000494412 CEP120Q8N960 986 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 MKL1Q969V6 931 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 NECAB3Q96P71 396 aaPredicted RBP6.07□□□□□ -1.44
CMSS1-207ENST00000494412 UBE2OQ9C0C9 1292 aaKnown RBP6.07□□□□□ -1.44
CMSS1-207ENST00000494412 SEC31BQ9NQW1 1179 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 ENAMQ9NRM1 1142 aa6.07□□□□□ -1.44
CMSS1-207ENST00000494412 CNTNAP5Q8WYK1 1306 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 ELOA3CA0A087WX78 387 aaPredicted RBP6.06□□□□□ -1.44
CMSS1-207ENST00000494412 FAM181BA6NEQ2 426 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 ELOA3DA6NLF2 546 aaPredicted RBP6.06□□□□□ -1.44
CMSS1-207ENST00000494412 PAGE1O75459 146 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 MAP3K6O95382 1288 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 HOXB4P17483 251 aaPredicted RBP6.06□□□□□ -1.44
CMSS1-207ENST00000494412 HSD3B2P26439 372 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 ADH7P40394 386 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 MLLT1Q03111 559 aaPredicted RBP6.06□□□□□ -1.44
CMSS1-207ENST00000494412 ELOA3BQ3SY89 546 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 SEZ6Q53EL9 994 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 CHSY3Q70JA7 882 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 ELOA3Q8NG57 546 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 TNFRSF25Q93038 417 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 BHLHE41Q9C0J9 482 aaPredicted RBP6.06□□□□□ -1.44
CMSS1-207ENST00000494412 ZNF576Q9H609 170 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 RRAGCQ9HB90 399 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 LRRC4BQ9NT99 713 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 DNAJB12Q9NXW2 375 aaKnown RBP6.06□□□□□ -1.44
CMSS1-207ENST00000494412 PRKAG3Q9UGI9 489 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 PPT2Q9UMR5 302 aa6.06□□□□□ -1.44
CMSS1-207ENST00000494412 ZBTB42B2RXF5 422 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 PDE2AO00408 941 aaPredicted RBP6.05□□□□□ -1.44
CMSS1-207ENST00000494412 SMAD7O15105 426 aaKnown RBP6.05□□□□□ -1.44
CMSS1-207ENST00000494412 HOXD8P13378 290 aaPredicted RBP6.05□□□□□ -1.44
CMSS1-207ENST00000494412 MCM4P33991 863 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 ZNF157P51786 506 aaPredicted RBP6.05□□□□□ -1.44
CMSS1-207ENST00000494412 NRLP54845 237 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 FAAP100Q0VG06 881 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 FBXW10Q5XX13 1052 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 FAM196AQ6ZSG2 479 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 HFE2Q6ZVN8 426 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 SLITRK4Q8IW52 837 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 TMEM102Q8N9M5 508 aaPredicted RBP6.05□□□□□ -1.44
CMSS1-207ENST00000494412 FBXO27Q8NI29 283 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 NXPE3Q969Y0 559 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 DEPDC7Q96QD5 511 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 EFCC1Q9HA90 598 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 SNTG2Q9NY99 539 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 STARD13Q9Y3M8 1113 aa6.05□□□□□ -1.44
CMSS1-207ENST00000494412 ADARB2-AS1A8MUL3 147 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 J3QW42 95 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 NFKBIEO00221 500 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 F13A1P00488 732 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 RPS26P62854 115 aaKnown RBP6.04□□□□□ -1.44
CMSS1-207ENST00000494412 ATP11AP98196 1134 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 RPS26P11Q5JNZ5 115 aaPredicted RBP6.04□□□□□ -1.44
CMSS1-207ENST00000494412 BNC2Q6ZN30 1099 aaPredicted RBP6.04□□□□□ -1.44
CMSS1-207ENST00000494412 C8orf86Q6ZUL3 223 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 TRIM42Q8IWZ5 723 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 JARID2Q92833 1246 aaPredicted RBP6.04□□□□□ -1.44
CMSS1-207ENST00000494412 SHDQ96IW2 340 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 FERD3LQ96RJ6 166 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 MIR1-1HGQ9H1L0 117 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 RASSF4Q9H2L5 321 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 TMEM39AQ9NV64 488 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 NAGPAQ9UK23 515 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 SLC6A14Q9UN76 642 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 PCDHB5Q9Y5E4 795 aa6.04□□□□□ -1.44
CMSS1-207ENST00000494412 LOC102724428A0A0B4J2F2 783 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 FAM221BA6H8Z2 402 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 GHRHP01286 108 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 ALBP02768 609 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 ALAS2P22557 587 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 EIF6P56537 245 aaKnown RBP6.03□□□□□ -1.44
CMSS1-207ENST00000494412 SIK1P57059 783 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 PPP2R3AQ06190 1150 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 RASA3Q14644 834 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 PTPROQ16827 1216 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 TNNI3KQ59H18 835 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 GPATCH3Q96I76 525 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 RNPC3Q96LT9 517 aaKnown RBP6.03□□□□□ -1.44
CMSS1-207ENST00000494412 PBX4Q9BYU1 374 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 MUC3BQ9H195 1237 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 SAMM50Q9Y512 469 aa6.03□□□□□ -1.44
CMSS1-207ENST00000494412 ROBO2Q9HCK4 1378 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms